KEGG   Paramisgurnus dabryanus (large-scale loach): 135735755
Entry
135735755         CDS       T10799                                 
Symbol
actb1
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03082  ATP-dependent chromatin remodeling
pdab04145  Phagosome
pdab04210  Apoptosis
pdab04510  Focal adhesion
pdab04517  IgSF CAM signaling
pdab04518  Integrin signaling
pdab04520  Adherens junction
pdab04530  Tight junction
pdab04810  Regulation of actin cytoskeleton
pdab04814  Motor proteins
pdab04820  Cytoskeleton in muscle cells
pdab05100  Bacterial invasion of epithelial cells
pdab05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    135735755 (actb1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    135735755 (actb1)
   04518 Integrin signaling
    135735755 (actb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    135735755 (actb1)
  09143 Cell growth and death
   04210 Apoptosis
    135735755 (actb1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135735755 (actb1)
   04520 Adherens junction
    135735755 (actb1)
   04530 Tight junction
    135735755 (actb1)
  09142 Cell motility
   04814 Motor proteins
    135735755 (actb1)
   04820 Cytoskeleton in muscle cells
    135735755 (actb1)
   04810 Regulation of actin cytoskeleton
    135735755 (actb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    135735755 (actb1)
   05100 Bacterial invasion of epithelial cells
    135735755 (actb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdab03021]
    135735755 (actb1)
   03019 Messenger RNA biogenesis [BR:pdab03019]
    135735755 (actb1)
   03036 Chromosome and associated proteins [BR:pdab03036]
    135735755 (actb1)
   03029 Mitochondrial biogenesis [BR:pdab03029]
    135735755 (actb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pdab04812]
    135735755 (actb1)
   04147 Exosome [BR:pdab04147]
    135735755 (actb1)
Transcription machinery [BR:pdab03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     135735755 (actb1)
Messenger RNA biogenesis [BR:pdab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     135735755 (actb1)
Chromosome and associated proteins [BR:pdab03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     135735755 (actb1)
    NuA4 complex
     135735755 (actb1)
  Chromatin remodeling factors
   BAF complex
    135735755 (actb1)
   PBAF complex
    135735755 (actb1)
   GBAF(ncBAF) complex
    135735755 (actb1)
   SWR1 complex
    135735755 (actb1)
Mitochondrial biogenesis [BR:pdab03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    135735755 (actb1)
Cytoskeleton proteins [BR:pdab04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     135735755 (actb1)
Exosome [BR:pdab04147]
 Exosomal proteins
  Proteins found in most exosomes
   135735755 (actb1)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 135735755
NCBI-ProteinID: XP_065110344
LinkDB
Position
4:33743497..33747006
AA seq 375 aa
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgatgatatcgccgccctcgtcgttgataacggctccggtatgtgcaaagccggt
ttcgctggagatgacgcccctcgtgctgtgttcccctccattgttggcagacccagacat
cagggagtgatggttggtatgggacagaaggattcctatgttggagatgaggcacagagc
aagagaggtatcctgaccctcaagtatcccattgagcacggtattgtgaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgcgtgttgcccccgaggag
caccctgtcctgctgacagaagccccccttaatcccaaagccaacagagagaagatgaca
cagatcatgttcgagaccttcaacacccctgccatgtacgtggccatccaggctgtgctc
tctctgtacgcttctggtcgtactaccggtatcgtgatggactctggtgatggtgttacc
cacaccgtgcccatctacgagggttatgctcttccccacgccatcctgcgtctggatctg
gctggtcgtgacctgacagactacctgatgaagatcttgaccgagcgtggctacagcttc
accaccacagctgagagagaaattgtccgtgacatcaaggagaagctgtgctatgttgcc
ctggacttcgagcaggagatgggtaccgctgcctcctcttcatccctggagaagagctac
gagcttcctgacggacaggtcatcaccattggcaatgagcgtttccgttgccctgaggct
ctcttccagccttccttcctgggtatggagtcttgcggtatccacgaaaccaccttcaac
tcaatcatgaagtgtgatgtggacatccgtaaggatctgtatgccaacacagtgctgtct
ggtggtaccaccatgtaccctggcattgctgatcgtatgcagaaggagatcacttccctg
gctccctccaccatgaagatcaagatcattgctccccctgagcgtaaatactccgtctgg
attggtggctctatcctggcttccctctccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggcccatccatcgtccacaggaagtgcttctaa

DBGET integrated database retrieval system