Paramisgurnus dabryanus (large-scale loach): 135738061
Help
Entry
135738061 CDS
T10799
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
Membrane trafficking [BR:
pdab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135738061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
135738061
NCBI-ProteinID:
XP_065112010
LinkDB
All DBs
Position
Unknown
AA seq
2034 aa
AA seq
DB search
MALVVYLKTVTELRGKGDRIAKVTFRGLSFFSRVLENCEDEARFEQAFRWPIGSQVDGDE
LLEIQVFNYSKVFTNRLIGTFCMVLQKVVEEGHLEVSDTLIDDNNTAIQTTIFIEIKYQT
MDGSVKVWNDGEFLDVPDDPDGTFQFETDSLLSGRSQSSATSPGRSIHGIPTFRKAGKGV
FSAMKLGRTRANKDDHRKGDDPAILDAEDLDGKAIRMGGGLDPDAISLASVTAVTTNVSN
KRSKPDIKMEASSGRPVDYQISVTVIEARQLIGLNMDPVVCVEIGEDKKYTSMKESTNCP
YYNEYFVFDFHVPPDVMFDKILKISVIHSKNLLRSGTLVGTFKLDVGTVYAQPEHQFHHK
WAMLSDPDDITAGCKGYVKCDIAVVGKGDNIKTPHKANEAEEDDIEGNLLLPEGVPSERQ
WARFYIKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVLVQFAGQKGKTSVQKSSYE
PIWNEQIAFTEMFPPLCRRLKVQIRDSDKVNDVAIGTHFIDLRKIANDGDKGFLPTMGPA
WVNMYGSTRNYTLMDEHQDLNEGLGEGVSFRARLLMSIAVEILDTTSPEIMSSTEVQVEP
VSNISESATGKMEEFFLFGSFLEATMIDRKIGDKPISFEVTIGNYGNQIDGVSKPTLVKK
KKDGGGENEEEESELIHNSSDEDAEDDGDLTSVPSTPPMKPVITDRNYFHLPYFEKKPCI
YIKSWWQDQRRRLYNSNIMDKIADKLEEGLNDVQEIIKTEKAFPERRLRGVLEELSTNCN
RFVTLANKDQNQAGRTKLDRERLKSYMREMENMGQQAKTIRTQVKKNTVRDKLKLVLNFL
HRLRFLADEPQHSIPDVFIWMISNNKRIAYARIPSKDILYSIVDEEMGKDCGKVKAVFLR
LPGKKGFGPAGWTVQAKLEVYLWLGLNKQKKDFMSGLPSGFEENRASKGIGIQAVPPISL
VYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQLLV
FDNVELYGEATELRDDPPIIVIELYDQDTVGKAEFIGRTFAKPLTKMVDEHYEPPRFPPQ
LEYYQIYRGNCAAGDLLAAFELLQIPYDEEEIRRALIAVHDFAVPQIKIGPAGCAALPPI
DGPTDSDRGPILPVPLGIRPVLSRYRIEVLFWGLRDLKRVNLSQVDRPRVDIECAGKGVQ
SALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVTTLRK
FIYSPPDKTANNWAHTARLANGHMTLTNGTYHSRPHSSLISHPAGDIVVNMDPEPNFKKM
DTVVKLDANEDDKDKGKKKKKKKKGDETEEEEPDESMLDWWSKYFASIETMMENLRAQEA
ALAEAEEKEDLEIAAESAEIKADEFSIKGTKLKEKSKDKKSSKDKKKNHDGAEKRPSKPK
VDELMVYNKELESEFDHFEDWLHTFNLCRGKAGDDDDHNVIDDDRIVGRFKGSLCMYKLP
LFAEITREAGFDPNMGMFQSIPHNDPINVLIRIYIIRATDLHPADINGKADPYIVIRLGK
TEVKDKENYISKQLNPVFGKSFDIEATFPMESMLTVAVYDWDLVGTDDLIGETKIDLENR
YYSKHRATCGIASHYSVHGYNVWRDPQKPTQILAKLCKEGKLDAPQYGPGGKVKVANRVF
FGPTEIEDESGLKKQTEEHLALTVLRHWEEIPRVGCKLIPEHVETRPLLNPDKPGIEQGR
IEMWVDMFPMDVPAPGPAIEISPRKPKSFELRVIIWNTDDVILEDDAFMTGEKMSDIYVR
GWLKGQQEDKQDTDVHYHSLTGEGNFNWRFLFPFDYLMAEEKIVISKKESMFSWDETEYK
IPARLTLQVWDADHFSADDFLGAIELDLNKFPRGAKTAKQCTLDMVVKEQELPTISIFKQ
KRVKGWWPFVARDENDEFELTGKVEAELHLLTAEEAEKSPVGLGRNDPEPLEKPNRPDTS
LMWFINPLKSIRYFIWHNYRWLILKTLGMLLLLLLLGLFLYSIPGYLVKKLIGA
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atggctttagtggtgtatctaaagacggtcactgagcttcgtgggaaaggggaccgaatc
gccaaagtcactttcagaggtctctcctttttctcacgggtgctggaaaattgcgaggat
gaagctcggtttgagcaggcgtttcggtggccaatcgggagtcaggttgacggggatgag
ttgctggagatccaagtgtttaattacagcaaagtcttcactaacagattgatcggcacc
ttttgcatggtcctgcagaaggttgtagaggagggtcacctggaggtgtctgacactctt
atagacgacaacaacacagccatacagacaactattttcatagaaatcaaatatcagacc
atggatggaagtgtgaaggtgtggaatgatggggaattccttgatgttccagatgaccct
gatggaaccttccagtttgagacagacagtctgctctctggacgtagccagagctcggca
acatcacctggccgatcgatccatggtattcccacatttcgcaaagcagggaaaggtgtg
ttttcagccatgaaattgggcagaacacgcgccaataaagatgaccacagaaaaggagat
gatccagccattttggatgcagaagatctggatggaaaggccatacgtatgggtggtggg
ctggaccctgatgccatctcattggcctctgttactgccgtaactactaatgtctccaac
aaaagatcaaagcctgacatcaagatggaggccagctcaggacgtccagtggattatcag
atcagtgttacagttatagaggcccgtcagctgattggtctgaacatggaccctgtggtg
tgtgtggaaatcggagaggataagaagtacacttccatgaaagagtccacaaactgcccc
tactacaatgagtactttgtctttgacttccacgtgcctccagatgtcatgtttgacaaa
atactaaagatctcagttatacattctaagaaccttctaagaagtggcaccctggtgggc
acctttaagctggatgtagggactgtgtatgcacaacctgagcatcagtttcatcacaaa
tgggcaatgctgtctgaccctgatgacatcacagctgggtgcaaaggttacgttaagtgc
gacatcgccgtcgtaggaaaaggagacaacatcaagactccccacaaggccaatgaagca
gaagaagatgatatagaggggaatcttctgctcccagagggcgttccatctgagagacag
tgggctcggttttatattaagatttacagagccgaggggctgcctaaaatgaacaccagc
atcatggccaatgtgaagaaagcttttattggagaaaacagggatcttgtggacccatat
gtcctggttcaatttgcagggcagaagggtaaaacctcagttcagaagagcagctatgag
cccatctggaatgagcaaatagcctttaccgagatgttcccacctttgtgtaggcgattg
aaagttcagatacgtgattcagacaaggtgaatgacgttgccataggaacccatttcatc
gatctccgcaagattgcaaatgatggagacaaagggtttttgcccacaatggggccagcc
tgggtgaatatgtacggttctacccgaaactacaccctgatggatgagcaccaggacttg
aatgagggactaggggagggtgtgtccttcagggcacggcttctcatgagcattgcggtg
gagatcctggacacaacgtctcctgagattatgagctctacagaggtacaagtggagcca
gtgtccaacatctcagagagtgcaacaggaaaaatggaggagtttttccttttcggatca
tttttggaggccacaatgatagacaggaaaattggagacaaaccaatcagctttgaagtc
actattggtaactatggtaaccagatcgatggtgtgagcaaacctacattggtgaagaag
aagaaagacggtggaggggagaatgaagaagaggagtctgagctcattcacaactctagt
gatgaagatgcagaggatgatggagatctgacgtctgtgccatccacacctcctatgaaa
ccagttatcactgacagaaattatttccacttgccgtactttgagaagaaaccctgcatt
tacatcaagagctggtggcaagatcagaggagacggctttacaactccaacatcatggac
aagattgcagataaactggaggaggggctgaatgatgttcaagaaatcataaaaaccgaa
aaggcgtttccagaacgcagacttaggggtgtgttagaagaacttagcacgaactgcaac
cgatttgttacactagcaaacaaagatcagaatcaagcaggaagaaccaaactggatcga
gagaggctgaagtcttacatgagggaaatggagaatatgggtcagcaggcaaagactatt
cgcacacaagtaaagaaaaacactgtgcgagacaaactcaagctagtccttaactttctt
catagacttcgcttcctggcagatgagccccagcacagcattcccgatgtgttcatatgg
atgattagcaacaacaaacgaatagcatatgcccgcatcccctccaaagacattctctac
tctattgttgatgaagagatgggcaaagactgtggaaaagttaaagccgttttccttagg
ttgccaggaaaaaaaggctttgggcctgctggctggacggttcaggctaaactggaggtg
tatttgtggctggggttgaacaaacagaagaaagattttatgagcggcctgcccagcggc
tttgaagaaaacagagcgtcaaagggaattggcatacaagctgtgcctcccatcagctta
gtgtataacatgaagcaggtgtttcagttaagagcgcacatgtatcaagctcgcagcctg
tttgctgcagacagcagtggtctgtctgatccattcgccagagttttcttctccacccac
agtcaggtgacagaggttttgagtgagactctttgtcccacatgggatcagttgcttgta
tttgataatgttgaactctatggtgaagccactgagctccgtgatgaccctccaattatt
gtcatcgaactgtatgaccaggacactgtgggaaaggctgaattcattgggcgaacattt
gcaaagccacttacgaagatggttgatgaacactatgaacctccacggtttccccctcag
ctggagtactatcagatctacagaggcaactgtgctgccggagatctgctggctgctttt
gaactacttcagattccttatgatgaagaggagatcaggagggctcttattgctgtccat
gactttgctgtgcctcaaattaagatcggtccagcaggatgtgcagcacttcctccaatt
gatggccccactgattctgaccgtggtccgattctgcccgttccattgggtatacgaccg
gttcttagccgatatcgcatagaggtcctcttctggggtctgagagaccttaaaagagtt
aacctctcccaggtggacagacctcgagtggatatcgagtgtgcagggaaaggagtccaa
tccgctctcattcagaactacaagaaaaatccaaacttcagcacattggtgaaatggttt
gaagtggatctaccagaaaatgagctgctgcatccaccgctgaatattcgtgtggtggac
tgcagggcattcggacgatatacattagtggggtcccatgccgtgaccactctgcgcaag
tttatctacagccccccagacaagaccgctaataactgggctcacacagctagactggca
aatggccacatgactctcaccaatgggacgtatcattcccgcccccactccagcctcatt
tctcatcccgcaggtgacattgtagtcaatatggaccctgaacccaactttaagaagatg
gacacagttgtaaagcttgatgctaatgaggatgacaaagacaaaggaaaaaagaagaag
aagaaaaagaaaggagatgaaacagaggaagaggaacctgatgagagcatgctggactgg
tggtccaaatactttgcctcaatagagaccatgatggagaacctccgagcacaagaagca
gctctggctgaggcagaagaaaaggaagatcttgagatagcagcagaaagtgcagagatc
aaagctgatgaattctccataaaaggcaccaaactcaaagagaagagcaaagacaagaaa
agctccaaggacaaaaagaagaaccatgatggggcagagaaacgaccctcaaagcccaaa
gttgatgaactcatggtgtataataaagagctcgaaagtgagtttgatcacttcgaagac
tggcttcacaccttcaacctctgtagagggaaagctggagatgatgatgaccacaacgtg
atcgatgatgacagaattgtgggccgattcaagggctccctgtgtatgtataagttgccc
ctgtttgcagagatcacaagagaggcaggatttgaccctaacatgggcatgtttcaaagc
attcctcacaatgacccaatcaatgttctcattaggatttatatcattcgagccacagat
ttgcaccctgccgatataaatggtaaagcggatccatacatagtcattcgactgggaaaa
actgaagttaaggacaaagaaaattacatatctaagcagctcaatcctgtctttggcaag
tcatttgatatagaggccacatttcccatggagtctatgctgacagtggcagtatatgat
tgggatttggttggaacagatgacctgattggcgagactaagattgatttggaaaacaga
tattatagtaaacacagagctacctgcggcatagcgtctcactactctgttcatggttac
aacgtgtggcgggaccctcagaagccaactcagatccttgctaagctgtgcaaagaaggc
aaattggatgcaccccagtatggacctggcggcaaggtcaaagtcgcgaaccgtgtcttt
ttcgggccaaccgaaattgaggacgagagtggtcttaagaagcagacagaagaacatttg
gctcttaccgttcttcggcactgggaggagatcccacgcgttggttgcaaactcatccct
gagcatgtggagacgaggccacttctgaacccagacaagccaggcattgagcagggaaga
attgaaatgtgggtggacatgtttcccatggatgtaccagcaccgggaccggccattgaa
atatcaccacgcaaaccaaagagctttgagcttcgcgttattatttggaacactgatgac
gttattctagaggacgatgctttcatgacaggagagaagatgtctgacatctatgtcagg
ggctggctaaagggacaacaggaggacaaacaggacacagatgtacattatcactctctg
acaggagagggaaactttaactggcgctttctctttccctttgactatctcatggccgag
gagaagatagtcatctctaaaaaggaatccatgttttcctgggacgagacggagtacaag
attcctgctcgactgacccttcaagtatgggatgctgaccacttctctgcagatgacttt
ctgggagcaattgaattggacttgaataaatttccccgtggggcaaaaacagcaaagcaa
tgcactcttgacatggttgttaaagagcaagagctcccaaccatctccatcttcaagcag
aaaagagtgaagggctggtggcccttcgtagcccgagatgagaatgatgaatttgagctc
actggaaaagtggaggcggagctccatctactgacagcagaggaagcagagaaaagtcca
gtcggtcttggtcggaatgatccagagccacttgagaaacccaatcgtccagacaccagt
ctaatgtggttcataaacccactgaagtccatacgatacttcatttggcacaactaccgt
tggctgatcctgaagactctgggcatgctgctcctcctcctcctcctcggtctcttcctc
tactctattcctggatacctggtcaagaaactcataggggcgtga
DBGET
integrated database retrieval system
