Paramisgurnus dabryanus (large-scale loach): 135740908
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Entry
135740908 CDS
T10799
Symbol
rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135740908 (rnf123)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135740908 (rnf123)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135740908 (rnf123)
Multi subunit type E3
KPC complex
135740908 (rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
DUF8032
zf-C3HC4_2
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
135740908
NCBI-ProteinID:
XP_065115531
LinkDB
All DBs
Position
24:21807423..22004467
Genome browser
AA seq
1292 aa
AA seq
DB search
MSSKEGTGVLKSETDEPKATGSVNEKLLCHYLHRIFPESSKPGPASAAHRKPLSFENLGD
HLEKLLTEDDLPEDGQDQVEGCLGPKTVVLDHSSGFEGLLFVDDDLLGVIGHSNFSSIRA
TTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTPDSYAYDGNRVRKWNVSTT
NYGKSWAAGDIVSCLIDLDEGTITFCLNGQSLGVAFSNIKMGPSIAYFPAISLSFKESVA
FNFGSRPLRYPVEGYRPLQSPPTSDLIKANRLLGYIKTLLSTTIDTEEEKVVESSSASWQ
LHGDSTVLMTLAHIFNHFSPLMCKVYLVEDVLMKFLLSILEGGGSVEEHPLIQELLDLFW
LLMEDYEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTAAILSHEKSRKYLLSNVL
FDVLRSVVFFYIKTPLRVNEAGLDELIPTTWWPTRFDKEGKDERDTREETSEERLKRRAY
ERGCHRLKKRIEVVEELQVQILRLMLNNKDKGTETGEASRYIFLNKFRKFLQENASNRGN
PTVLCPPEYMVCFLHRLITAIRSYWDEGREKCPGTISSEDAYVPPQLFYNGKVDYFDLQR
LGGLLSHLKKTLKDDLATKANIIIDPAEIQATSMDDLDEDEESGATQRPSGAIGGAMARP
GWLSSPTLGRANRFLSTATVSLMSPGRPLAPPEKVKVRTLVVDQRTEEDIEGSHSNDGLL
LGRPLEETDQPIAEKSLLEILDGVVMMYNLSVHQQLSKMVVISDDIHEYAVALKDIEDKI
AQCSSKKAEILEELQKSQRVFAEKLNHLSRRLAWINVTIFSKEKMLDVYWLLRVCIRTIE
HADNTGSLFAFMPEFYLNVAMNSYSALKNYFSPSNCMEELPEYEETLTQLAAILSKHFAD
PRIVGTDIKDSLMQALASYVCYPQSLRAVERIPEDQRMAMMRNLLAPYEQRPWAQTNWIL
VRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSLRLQKHMADLLSRDKDMAASFL
NSVLNQLNWAFSEFIGMLQEIQQAAERPERNFVDTRQLKVCATCFDLSVSLLRVLEMTVT
LVPQIFLDWSRPSAELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPGLESVDHYPILV
AVTGILVCILVDSDKQGISRATAVLLSDPCFQLRSIQYLLGEGESGATSTDSKHFSLHTY
TDYISAEEKQKVEQMLAFLTEESKQAAASTAPTSEEDLCPICYAHSISAIFKPCSHKSCK
ACINQHLMNNKDCFFCKATITGVDDYTIPGLS
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaggaaggcactggcgtgctgaaatccgaaacagatgaacccaaagctaca
ggtagtgtcaatgagaagttgttatgtcactatttgcaccgcatctttcctgaatcgagt
aaacccggaccagcatctgcagcacacagaaaaccactgtcgttcgaaaaccttggagat
catctggagaaactgttgactgaggatgatcttcctgaggacggtcaagatcaggtggaa
ggctgtctcggacctaagactgttgttctggatcacagcagtggatttgaagggctgcta
tttgttgacgatgacctcttaggggtgatcggccacagcaacttcagttcaatcagagcc
accacatgtgtttacaaagggaaatgggtctacgaagtcctcatctcatctcaagggttg
atgcagattggctggtgcacaataaactgcaggttcaaccaggaggagggagttggagac
acgccagactcgtacgcttatgacgggaacagagttcgcaagtggaacgtttcaaccacc
aactatggcaagtcttgggctgctggagatatcgtcagctgtctgatagatttggatgaa
ggaacaattacattttgtttaaatggacagtctcttggtgtggcattcagtaatattaag
atggggcccagcatagcttattttccagccatcagtttgtcattcaaggagtctgtagca
ttcaacttcggcagccgtcctctcaggtaccctgtggagggttaccgtccactacaaagc
ccaccaacctctgacctcatcaaagccaacagacttctgggatacatcaaaactcttctg
tccaccaccattgacacagaggaggaaaaggttgttgagagcagcagtgcatcatggcag
cttcatggcgattcgacggtcctgatgacccttgcacatatatttaaccatttttcacct
cttatgtgtaaagtttatttggtggaggatgtgttgatgaagttcttgttgagtatactg
gaaggtggaggatcggttgaagagcatccgcttatacaagaattgcttgatctgttctgg
ctgctcatggaggactatgaggtgaacgagtgtttgaaacagctgatgatgtcactgctg
agagcgtatcgcttttctcccatcattcctgatttgggatttcagattcattacctgcgt
ctgaccgcggcaatcctcagtcatgagaagtccaggaagtacctgctcagcaacgtattg
ttcgatgtgctgcgatctgtggtcttcttttacatcaagactcctctgagggtgaacgag
gcggggctagatgaactgatcccaaccacatggtggccaacgcgcttcgacaaagagggt
aaagatgagagagatacacgagaagagacatcagaggagaggctgaaacgccgggcatac
gagcgaggctgtcacaggctaaagaaaaggattgaggttgtggaggagctacaagttcag
attctcagactgatgttaaacaacaaggacaaaggaacggaaacgggggaagcttcccga
tacattttcctaaacaaattccgcaagtttctgcaagagaacgccagcaatcgagggaac
cccacagttttatgtcctcctgaatacatggtgtgctttctacaccggttgatcacggcc
atcaggagctactgggatgaagggagggaaaaatgtcctggaaccatcagcagtgaagac
gcctatgttccccctcagctgttttacaacgggaaggtggattactttgatcttcagagg
ctcggtggacttctttcgcatttgaagaagacactaaaagatgacttggccacaaaggcc
aacatcatcatagacccagcggagatccaagccacctccatggatgacctggatgaagat
gaggagtcgggagccacacagagaccatctggcgccattggtggtgcaatggctcgtccc
ggctggttgagctcgccgaccctgggccgggccaaccggttcctcagcaccgccaccgtc
agcctcatgtcccccggacgaccactcgccccacctgagaaggttaaagtccggacgctt
gtagtagaccaaagaacagaggaagacattgagggaagccatagtaacgacggactgttg
ctggggcgaccgttagaagagaccgatcagccaatcgcggagaagtctcttctggaaatc
ctggatggagttgtgatgatgtataatttaagtgtccatcagcagctcagcaagatggtg
gtcatatctgatgatattcatgaatacgcagttgcccttaaggacatagaggataagatc
gcccaatgctcaagcaaaaaagcggaaattctagaggagttgcaaaagagccaaagagtg
tttgctgagaagttaaaccacttgagtcgcaggctggcctggatcaacgtcaccatcttt
tccaaggagaagatgttggatgtttactggctcctacgtgtatgcatccgcaccatcgag
catgcggacaacacaggctccttgttcgcattcatgccagaattctacctcaacgtggcc
atgaacagctacagcgccctcaagaactactttagcccatccaactgcatggaagaactg
ccagagtatgaggagacgctcacacagctcgctgccattctctccaaacactttgcagat
ccgcggatcgtcggtacagatattaaagattctctgatgcaggctttggccagttacgtg
tgttatccacagtccctgagagccgtcgagaggatcccagaggatcagcggatggctatg
atgaggaacttactggctccatatgaacagagaccctgggctcaaaccaattggattctg
gttcgtctctggaggggttgtggctttggctacaggtacactcgcttacctcacctgctg
aagaccaaacctgaggatgccaacttacccagtctgcagaagccgtgcccatcacttcgg
ctccagaaacacatggccgatctcctcagtcgagacaaagacatggctgccagtttcctc
aacagtgtcctcaaccagctcaactgggctttctcagagttcatcggcatgttacaggag
atccagcaagcggcagagcgaccggaaaggaatttcgtggacacacggcaactaaaagtg
tgcgcgacctgctttgacctgtctgtaagtctgctgcgggttctagagatgactgttact
ctagtaccgcagatattcctggactggtcccgcccctctgctgaactgctgcttcgacga
ttggctcagctactgaaccaggtgctaaatcgagttacagcggaaagaaacctgtttgac
cgagtggtcaacttgcgcctcccaggtctggaaagtgttgaccactatcccatcctcgtt
gctgttacagggattttagtgtgtattctggttgactcggacaaacaagggatctcacgg
gctactgcggtgctgctgtcagatccttgcttccagcttcggtccatccagtatcttctc
ggagaaggagaatccggagccacgagcacagacagcaagcacttttctctgcacacgtac
acggactacatcagcgcagaagaaaagcagaaggtagaacagatgctagctttcctgacg
gaagagtccaaacaagcggcagccagcacagcaccaaccagtgaggaggatctctgccct
atctgctatgcacactcgatatcagccatcttcaagccgtgctctcacaaatcctgcaag
gcctgtatcaatcaacacttgatgaataacaaggactgcttcttttgcaaggccaccatc
actggagtagatgattacactataccaggcctctcttag
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integrated database retrieval system
