Paramisgurnus dabryanus (large-scale loach): 135741027
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Entry
135741027 CDS
T10799
Symbol
cxcl12b
Name
(RefSeq) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04060
Cytokine-cytokine receptor interaction
pdab04672
Intestinal immune network for IgA production
pdab04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
135741027 (cxcl12b)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135741027 (cxcl12b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
135741027 (cxcl12b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pdab04052
]
135741027 (cxcl12b)
00536 Glycosaminoglycan binding proteins [BR:
pdab00536
]
135741027 (cxcl12b)
Cytokines and neuropeptides [BR:
pdab04052
]
Cytokines
Chemokines
135741027 (cxcl12b)
Glycosaminoglycan binding proteins [BR:
pdab00536
]
Heparan sulfate / Heparin
Chemokines
135741027 (cxcl12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
135741027
NCBI-ProteinID:
XP_065115725
LinkDB
All DBs
Position
24:complement(25412494..25423729)
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AA seq
99 aa
AA seq
DB search
MDCKVLAMVALLTVAMWSPETDAKPISLVERCWCRSTLNTVPQRSIREIKFLHTPSCPFQ
VIAKLKNNREVCINPKTKWLQQYLKNAINKIKKSKKGEE
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggattgcaaagttctggcgatggtggctcttctgaccgtggccatgtggagccctgaa
actgacgccaaacccatcagtttggtggagagatgctggtgccggtccactcttaacacc
gtcccgcagcgaagcattcgtgagattaagttcctccacacacccagctgcccctttcaa
gtcattgccaagctgaagaacaacagagaggtctgcatcaatcccaagaccaaatggctg
cagcagtatctaaagaatgccattaacaaaataaagaagtcaaagaaaggtgaggagtaa
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