Paramisgurnus dabryanus (large-scale loach): 135741424
Help
Entry
135741424 CDS
T10799
Symbol
kdm2ba
Name
(RefSeq) lysine (K)-specific demethylase 2Ba isoform X2
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135741424 (kdm2ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135741424 (kdm2ba)
04121 Ubiquitin system [BR:
pdab04121
]
135741424 (kdm2ba)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135741424 (kdm2ba)
Enzymes [BR:
pdab01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
135741424 (kdm2ba)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
135741424 (kdm2ba)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135741424 (kdm2ba)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
135741424 (kdm2ba)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
135741424 (kdm2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
135741424
NCBI-ProteinID:
XP_065116171
LinkDB
All DBs
Position
11:22259837..22276263
Genome browser
AA seq
860 aa
AA seq
DB search
MAMSLSADEEDYDSDTAEQQRLPNRPKSKMATSTATTPASASSSSTATAVKLPSNRTSSG
ARRRRTRCRKCEACVRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVC
GEAGKEDTLDDEDEKFNAMLMECSICNEIVHPNCLKVKDAAGVVNDELPNCWECPKCNYA
GKTGKQKRGPGFKYASNLPGSLLREQKAGREGREEGDQTSTGAASLKRKTEREETPRLKS
EDLPSRLPPLLSPSGLPRPRSEVPNFLRKKRKLFDDDEEEEEASTKKKPKKLWRPEEPLL
PKLSHMKTEEEEDNSDEEEEKLEKREPPRRSFKKDYSMVRKEEEQDEDRRDDRDLPFRSL
RQYSNMRKEVNQEEDKEEDEEEEDEDCKRGRDGSPTLKNHSLSLESDASRCSSPRAGPSS
EGSETQEKAPRARAKRHRRKPPNRQLSAELSKQLNMEIRRTEHSLANENQQPLKSEPEDS
ENEEPKRIGLRNGTAGNGGGGERGGGGDGGGERPHLRAREMNGSSWELRHFYPPQITPLG
LNRSSPAIRPLPARSPPKCVQMERHVIRPPPICPPPDRLPLADGRNHIAPREAWLAIFSH
LSHRELCVCMRVCRTWNRWCCDKKLWTCIDLKRCKSIIPLMLSGIIRRQPMTLDLSWTNI
SKKQLSWLINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDLQWVEGLKDPQMRDLLS
PPTDNRPGQMDTRSKLRNVTDLRLAGLDITDSSLRLIIKNMPLLLRLDLSYCNHINDQSV
NLLTAAGTTTRDSLTDVNLSVCNRITDQSLSYFKRCGNICRIDLRFCKQVSRQACERFIA
EMSVSVPFQLKEDKLLQKLS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtcactgagcgcggacgaggaggattacgactcggacacagccgaacagcaa
cggctacccaaccggccaaaatccaaaatggctacatcaacagctacgactccggcatca
gccagttcttcatccactgcgacagcggtcaagttgccatccaaccggacctcctctgga
gcccgacgcagacgcactcggtgtcgaaagtgtgaggcgtgtgtccggacagaatgtgga
gagtgtcacttctgtaaggacatgaagaagtttggaggacctggtcgcatgaaacaatcc
tgcattatgagacagtgtatagcgcctgtgttaccacacacagcagtgtgcgtggtttgc
ggcgaggctgggaaagaagacacactcgacgacgaagacgagaagttcaacgccatgctc
atggagtgctccatctgcaatgaaatcgtccacccaaactgtctcaaggtgaaagatgca
gctggagtggtgaacgatgagcttcctaactgctgggaatgtcctaaatgcaactatgct
gggaagactggaaaacaaaaacggggcccagggttcaagtacgcatccaacctaccaggg
tctctgctgagggagcagaaagcaggacgtgaaggaagagaggagggagaccagacctcc
accggtgcagcatctcttaagagaaagactgagagggaggagactcccagactgaagagc
gaggatctgccctcacgcctgccccctctactgagtcccagtggcctgccaagaccacga
tctgaagtgcccaactttttgaggaagaagaggaaattatttgacgacgatgaagaggaa
gaggaggctagcactaaaaagaagcctaagaagctctggaggcctgaggagcctttgctt
cccaaactctctcacatgaaaacagaagaggaggaagacaactccgatgaggaggaagaa
aagctggagaagcgagaaccgcctcgccgttcatttaagaaagactacagcatggtgaga
aaagaggaagagcaggatgaagataggcgagacgacagggatctaccattcagatcccta
aggcagtatagcaacatgagaaaagaggtaaaccaggaggaggacaaggaggaagacgag
gaagaggaggacgaagactgcaaacgaggcagagacggcagccccacactaaagaaccac
tcgctatcgctcgagagtgacgcgtcacggtgcagctccccaagggcagggcccagcagc
gaaggcagtgagactcaggaaaaggcaccacgagcccgggcaaagcggcaccgtcgcaag
cctccaaatagacagctcagtgcagagctcagcaagcagctcaacatggagatccgtcgc
accgaacactccctggccaacgagaaccagcagcctttgaagagcgaaccggaggacagt
gagaacgaggaaccgaaaaggattggtttacggaacgggaccgccgggaatggcggagga
ggcgaaaggggagggggcggagacggtggaggggagaggccgcatctgcgagcgagagag
atgaacggatcgtcgtgggagctgcggcacttctatccaccacagatcaccccgttaggc
ttgaaccgcagttcacctgccatcaggccgcttcccgctcgatcccctcccaagtgcgtg
cagatggaacggcacgtgatccggccgcctccaatctgccctccgcccgacaggctgccg
ctggccgatgggcgcaatcacatagcaccacgagaagcttggttggctatcttcagtcac
ttgagccatcgtgagctttgtgtgtgcatgcgtgtgtgccggacctggaatcgctggtgc
tgtgacaaaaaattatggacatgcatcgatctcaagcggtgtaagtccatcatccctctt
atgttgagcgggatcattcgcagacagcccatgactctggacctgagctggaccaacatc
tccaagaagcaattaagctggcttatcaaccgactaccaggtctgagggtgctcctcttg
tccgggtgttcgtgggtggccgtttctgctctctgcacttccagttgtcctcttctgcgt
actttagatctgcagtgggttgagggtcttaaagacccccagatgagagatctgctgtct
cctcccactgacaacagaccaggtcaaatggacacacgcagcaaactaaggaatgtcaca
gacttgcgtctggctggtctggacatcaccgacagctctctgcgtctcatcattaaaaat
atgcctctgcttttacgcctggacttaagttactgcaatcatatcaacgatcagtcggtc
aacctgctgactgctgcaggaaccactactagagactcgctaaccgatgtcaacctctca
gtgtgtaacaggatcacagatcagtcgctgagctacttcaaacgctgcggaaacatctgt
cgcattgacctgcgcttctgcaagcaggttagccggcaggcgtgcgaacgcttcatcgcc
gagatgtccgtcagtgttcctttccaactcaaagaggataaactgcttcagaagcttagc
tag
DBGET
integrated database retrieval system
