Paramisgurnus dabryanus (large-scale loach): 135744144
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Entry
135744144 CDS
T10799
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
135744144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135744144
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pdab04054
]
135744144
Membrane trafficking [BR:
pdab04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
135744144
Pattern recognition receptors [BR:
pdab04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
135744144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
CARD
NLRC4_HD2
NOD2_WH
AAA_25
nSTAND3
AAA_16
AAA
Mre11_C
Motif
Other DBs
NCBI-GeneID:
135744144
NCBI-ProteinID:
XP_073671153
LinkDB
All DBs
Position
6:4560880..4582311
Genome browser
AA seq
1505 aa
AA seq
DB search
MVRSVTFPADVRGVQANDNVQISWPIRNTERFKSVRLRKRVKSATKMYDAGRTSLSRVMR
QSRRSTSLSYSEASSKNQSSSICAMLEELDISIDRPADLRRFTEKKRRGYHLHHNLTVNQ
KSVILQYKKSINFNCQYVTECDPLRDERVLLVKRYVEPVIIQRSTERSRIYFYKHMMSDY
FRTKPLPQVFKNHNIRMNNLFSHDQSMSSHWSFNDEEIPKTVILSGDSGSGKSFMLKKIM
LDWASGKFYHYFFGVVFLLKCEELKCVSEDMSLTELLSWSCGLTSDQISQMLQCSTQSLL
LIDGLDELMFHPHIRDRSQPADPYQRAPPVEILRNLLNGHILPTSFLLVTTRTAATHTVK
NLLKGPQRFIEIMGFSESGVEEYFRKIFQDESLFKKAYECVKANEYLQIACSVPLMCWIV
CFCLKYLPNGENVMGELETTTSIYAHFVSVLVEHHCEKQFVPKLLKKYGQLAEKCMLNQE
ALFDERTMSETGLDVDGSLFLHKELLNKEGVHKMLVFKFMHLCFQELFCALHYILINEAD
KKHHPFFERDELFYPAILFLCGLSNNQMSSSLELFQPNLTFPQSVREDLKNIILHVLRKN
LHLTRIFALRCLFELHDDEFVRKALEAYRSMNFSYTSLKVTDCWVLLYCLQCCTQITELN
ITHCDLTADKLRILQPALCVCESMRLTMDHLSEIGDFIKALSESKTLRELNIVEESEKHN
TLFSTPSVSILNGEMRLDVKYNWRFASLSRVCFTCPHSAISSSDWIIIFQRFQKLSQYQQ
NSQECNEHVDALFSVLLSLCGLKTLELMILCLNKTWSLRILSIIQTCSSLKDICISVTGL
VLEAGLTLLQESLTDPHCTVTIEGRKCNKPTKPCTENWHLTWSHSCNEEVKIHFKPNVLE
ELKANPMMQKERESKSNDPNGVPGELNSALRRTPTTVITTDDFGVLLFKDPRLPSFRLLW
LGPLSSRFSDPRINRAFGLFKRLPPGHEDTVDRSPRILSPLHRRRLLMTADYRFEGGGLT
VTGCAVRQLDSVFLCDAGGQNPLGELAPTGKISTVQCPFNSLTAPSSFASLGCRTLSSRF
KRSVDQRRPPAPPRTERVVWVCPRQLKVSDSESSELSLEFSELNLDSHPVCESCVDIVDS
DQWVQVNPSVCKDEGESKFRISTEPGHYECTKTRMRWVCDCDVTLQYHTLDGRSLIAELE
RLQYERIGPVIDVTVISGKLKEAHLPHYACLAESDPSLKDAVKVLSQKDEGVVLHPVELT
RFHAKIVKPSFSITTLIISWLMQWEEHCDLLLYMRCKSPLILHVYFFPLNDNCSKEKVEH
NEKSSLQISHPRPNRPFRMKTPHLLEVLDASVHPIEGISFRRDIHPNFFKVKQDRDGDVE
MTLIREEDRTTVWKATIWKNELPRQIKNEPQRHCDIDTDQFVLNHWSNLVQGVKCVKSIA
DKLREQKIIKDELYSQITHMNLTSQDSMRKICSVVDSGSRLVKDKFISILQEEEPDLYEE
LICSD
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggtaaggagcgtcacatttccggctgacgtcagaggtgttcaggccaatgacaacgta
cagattagctggccaatcagaaacacagaacgtttcaaatcagtccgtttaaggaagaga
gtgaaatctgctacaaaaatgtatgatgctggtaggacttctttatcacgtgtaatgaga
caaagtaggcggtctacaagccttagctattctgaagcttcttcaaaaaatcagagctct
tcaatatgtgcaatgttagaagagctggacatatccattgacagacctgctgatttgaga
aggtttactgaaaaaaaaagaagaggataccacttacaccataacctgactgtcaatcaa
aaatctgtgattctacagtataagaagtctatcaattttaactgccaatatgtgacagag
tgtgaccctttacgtgatgaacgtgtgctactggtcaaacgttatgttgaaccagtgatc
attcaaaggagtacagagcggagtaggatatacttttacaaacacatgatgtctgattac
tttagaacaaagccattacctcaggtttttaagaatcacaacattaggatgaacaacctc
ttcagtcatgatcagtcaatgtctagtcattggtcattcaatgatgaagaaataccaaaa
actgtgattctcagtggagactctggaagtggaaaatccttcatgttgaagaagatcatg
ttggactgggcatctggaaaattttaccattatttttttggcgttgtctttcttctaaag
tgtgaagagctgaagtgtgtttctgaggatatgagcctgactgagctcttaagctggagt
tgtggtttaacgtcagatcagatctcacagatgttacagtgctcaacacagagcttgctc
cttattgatgggcttgatgagcttatgtttcatccacacattagagatagatcacaacct
gctgatccatatcaaagagccccacctgtggaaattcttagaaaccttctgaatggacac
atcctgcccacttccttccttctggtcaccactagaactgcagctactcatacagtaaag
aatctcctcaagggaccacagcgtttcattgaaatcatgggcttctctgaaagcggggtg
gaagagtacttcaggaagatttttcaggatgagtcactcttcaagaaagcatatgagtgt
gtgaaggcaaatgaataccttcagattgcctgctcggtacctttgatgtgttggattgtt
tgtttctgtctgaaatatttaccaaatggtgagaatgtgatgggagaactagagacgacc
acctccatatatgcacactttgtgtctgttctagtggagcatcattgtgagaaacagttt
gttcccaaactgctgaaaaaatacggtcagctggcagagaaatgcatgttgaatcaggaa
gctctgtttgatgaaaggactatgtctgaaacaggattagatgttgatggtagtttgttt
ctgcacaaagaacttttgaacaaagaaggtgtccataaaatgttggtctttaaatttatg
cacctttgctttcaggagctcttttgtgctcttcattatatcctaattaatgaagcagac
aagaaacatcaccccttttttgagagagatgaattattttatccagctatactgttcctc
tgtggtctctcaaataatcagatgagcagctctttagagctctttcaacctaacttgact
tttcctcagtccgtaagagaagacctaaagaacataatccttcatgttctaaggaaaaat
ctgcatcttacaaggatatttgcactccgctgtctctttgagctccatgatgatgagttt
gtaaggaaggctctggaggcttacagatccatgaacttctcttacacatccctgaaggtg
actgactgttgggtgctgttgtactgtcttcagtgttgtacacagatcacagaactgaac
atcacacactgtgatttaacagctgacaaactccggattcttcagccagcactctgtgtg
tgtgagagtatgaggttgacgatggatcacctgtctgaaattggagattttatcaaagca
ctcagtgaatcgaaaaccttgagagaactaaatattgtagaagaaagtgaaaaacataac
actctcttctcaactcccagtgtgtccattttgaatggagaaatgagactggatgtgaag
tacaattggaggtttgcatctctctcaagagtctgtttcacttgtccacactcagcgata
agcagctctgactggataatcatcttccagagattccaaaaactttctcaatatcaacaa
aattcacaggaatgtaatgagcatgtagatgctctgttctctgtcctgctctctctttgt
ggtttaaagacgttggagctgatgatactctgtctgaataaaacctggtctctcaggatt
ctctcaatcatccaaacctgtagcagtctgaaggacatctgtatcagtgtcacaggtttg
gtgctggaagcgggactcactttactacaagaatcactgacagatccacactgcactgtg
actattgaagggagaaagtgcaataaacccactaaaccgtgcactgagaattggcatttg
acgtggagtcacagctgtaatgaagaagttaagattcactttaaaccaaatgttctggaa
gaactgaaagctaatccaatgatgcaaaaggagagagagagcaagtccaacgatccgaat
ggcgtaccaggtgagctcaactcagcgctacggcgcacaccaacaacagtgataacgacc
gacgacttcggggtgctcctttttaaagatccacgcctgccttcctttcgcctcctgtgg
ctcggtcctctttccagtcgcttcagcgatccccggatcaacagagccttcgggctcttc
aaaaggctaccgccgggacacgaggacacggtggatcgatctccgaggattctctcacct
cttcaccgacggcggctcttgatgactgctgactaccgcttcgagggtggcggacttacg
gtaactggctgcgcggtgcgtcagctagacagtgttttcctatgtgacgccgggggccaa
aaccctctcggcgagctcgcaccaacaggaaaaataagcacggtgcagtgtccctttaac
tccctcacagctccgtcctctttcgcctctctcggctgccgtactctctcctctcgcttt
aagcgctctgtggatcaacggcgtcctccggctcctccgaggacggagcgtgtggtttgg
gtctgccctaggcagctaaaggtttctgactctgaatcttctgaattgagtctagaattc
tctgaactgaatctcgattcacatcctgtctgcgaatcttgtgttgacatagttgattct
gatcagtgggttcaggttaatccatcagtctgtaaagatgaaggagagtcaaagttcagg
atcagcactgagccgggtcattacgagtgcaccaaaaccagaatgcgctgggtttgtgat
tgtgatgtcactcttcagtatcatacactggacggacgttccctcattgcagagctggaa
agacttcagtatgagcgaattggtcctgtgattgatgtgacggtgatctctgggaaactg
aaggaggcacatctccctcattatgcctgtttagcagagtctgacccctcgctcaaagat
gctgtgaaggtcctcagccaaaaagatgaaggggtagttttacatcctgttgagctgacc
cgctttcatgccaaaatagtcaaaccgtcattttccatcacaactctgattataagttgg
ctaatgcaatgggaggaacactgcgatcttcttctctacatgcgatgtaaaagtcctctc
atacttcatgtctacttctttccattgaatgataattgttcaaaagaaaaggttgagcac
aatgaaaaatcaagccttcagatcagccatcccagacctaacaggccttttcggatgaaa
acacctcatcttctcgaggttcttgatgcttctgtacatcccatcgagggtatttcattt
cggagagacatccacccaaacttcttcaaggttaagcaggatcgagatggtgatgtagaa
atgactcttattagagaagaggatcgcactactgtgtggaaagcaacaatttggaaaaat
gaacttccaaggcaaattaaaaatgagccacagcgacattgtgacattgatacagatcag
tttgttcttaaccactggtcaaatcttgttcaaggagttaaatgtgtgaagagtattgca
gataaactgcgtgaacagaaaataattaaagatgaactgtactcacaaatcacacatatg
aatttaactagtcaggatagcatgagaaagatctgttctgttgtggattcaggtagtagg
cttgtcaaagacaaattcatttccattcttcaggaagaggagcccgacctttatgaagaa
ctgatatgttctgattga
DBGET
integrated database retrieval system
