Paramisgurnus dabryanus (large-scale loach): 135746266
Help
Entry
135746266 CDS
T10799
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135746266 (ttc3)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135746266 (ttc3)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135746266 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
TPR_1
TPR_2
zf-RING_2
zf-rbx1
TPR_11
zf-C3HC4
zf-C3HC4_2
TPR_16
zf-RING_UBOX
TPR_12
TPR_17
zf-C3HC4_3
ANAPC3
zf-RING_5
zf-RING_11
zf-ANAPC11
PAM2
zf-HC5HC2H
zf_RING_Vps8_fungal
TPR_9
HEAT_Nup120
NCAB1
NPBW
Motif
Other DBs
NCBI-GeneID:
135746266
NCBI-ProteinID:
XP_065120960
LinkDB
All DBs
Position
10:115736..135960
Genome browser
AA seq
1806 aa
AA seq
DB search
MSDSEDSDLKEGADFVRHQTKIVYHNHHPYIHMEPPDVTYKRWTKIKPEVKKEVGHMMRI
SRFWWYILLKPQERENTSFWAISMGFLDPNVSSGDLSLETLKKIEVLESILEAMDMGLSH
REAEKKARALVAINMSLIVNVHSLKDAVDWLVDSGMPNIREKLQELDSLDIRYHTLRIIF
SEYVHYLLVMSSSIKQAMKDFSTDPDLWSLGKSEEMKNKGNEQFQRKKYDSALKWYTKAI
KYHPNNHILYGNRALCFIRSEKYLKAVGDGKRAVILQPDWAKGHYRFCDALFYLGEHQKA
LEANRHAQNACGRDPEGYKDLVQQFERFQTELQEKKAEMKSKKMETKKARAHVTSDSSSQ
PLKSSHISEPASDSTVQDNLQQSEKQQQHLPESLENSEAPAEDKSEAHKDLNSEMTPRKS
KKSYLNTPEKPAVRSKHPPTPEKPAVRSKHPPAPEKPAVRSKHPPAPERAVVPEPQETVS
DVTMKERFCAAVQEGQEALNDQRCQNAQHAFSLAVSMLDSSVIKDLGLSELDICVLLYGY
ATALLEIGQPEELAKARRLFIELESSERKFQSLVQYGMGRVYLKENRFAKALEHFSNALL
IIQRNITPGKLTWPTTKAILEETQPACLQEHLENFIEMCKFPPKPDAVCRHSHCLSHSIE
IYFSDPDFKGFVQLICSQGCKVEFHMTCWKKLKTLSFTDKNDKDFLKDSCFTPDCGGQIC
HIVIFGSSGLIKCEFETSIPKLRPAGRLRSRQQCTSIKKMKSKNDKKLRRKQHRLTACAA
PRERNEVIPADDPAKRVTPERSVIVDRVLHQIHENKELFKEESVNISCVLDHLRPWLDLY
ECKGHESALKVYGEDIRLSELVDLLLESSNRVWARLFIEKLCSWLHIKPKLQQWAQQLDN
AGLKAAESLISRYASHLQQLDVKPLLTFKPLQDAFIRTFGTSADLFDSSGFTLMEYLKRA
PAKDTRLFIWTLEASRERYESCHFILDQYFEDDAVCLVIKKTDDAENTNSVFKTKSRHRK
KKQKDSKSVILLSGMRGGHSRDEDDEDDLFSEENAFVFFNSEDPFSVPDHLRGQLAEFEE
QYAGSAHRSYYKTILDNNPDPTKESLYDYFAQILEEHGPLQASDPLMVGELENFPLEAQQ
KITAAGGLEAFLLESLRFVMTNNKMGLMKHVVPLTESMSHLNPSAKEFWPHTDVLPNGVS
LFNLSSFDNGASPSFPLSVTSDSVVLPDPYAFENPLVDDKFSAADVTLDPAAQAEASQLY
ETVGENVPAEYSSCVFENSVYISERSAGERGGGNGSTQKIAVSVQASDESKDVSISTEPL
VSFERNNGDMIQKEKQTLSLSKKLLQMKEDADAVQQMRSKQMTSLQEELEEITHRTQIAG
AELGMFQQKLEDEVKKDQQEKKENQETLKMLKMNIKELTDQRESFTRDISEKTKEYQTKL
EDFLDVSNQCAAERMSLEDEIKRHRDTCVKDQKRSLMAQLSVLQNRRDHGLRCLRGRLDE
GNMIVKHLTEASHSFFSAMLLSALDDWKKFISDIEEKIHNAEMEFESQMNEVKKGTRLCS
LPPVSVPSPPAVPATAPAAFQQSGSHNTHLHSHHGSLQPTRTPTPTGRNTPQPAERRPEE
SQQHVTVYDRMLERLNVMFPHYNKMVLSKFIQEVRLANGGTLNALTYDDVVNRVAQLILD
HQENVREMTVRDERDSAQGSTLSDDLGRWTGAPPLTHVWKNMSEKHRNAALALNMEDPCI
ICHEDMSAEDVCVLECRHSFHRQCIKSWLKEQSTCPTCREHALLPEDFPVLPGRHRKSQA
SAATFN
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactctgaagactccgatctaaaagaaggagcagattttgtgagacaccagaca
aagattgtttatcacaaccatcatccttatattcacatggagcctcctgatgtaacgtat
aagaggtggaccaagataaagccagaagtgaagaaagaagtgggtcacatgatgcgcatc
tctagattctggtggtacatcctcctaaaaccgcaggaacgagagaacacttcattctgg
gctatcagcatgggctttctggacccaaatgtttcgtcaggtgatttgagtttggaaaca
ctcaagaagatagaagtgttagaaagcattctggaggccatggacatgggtctttctcac
agagaggcggagaaaaaagcccgagctctggtagcaataaatatgtccttaatcgtgaat
gtacacagtttgaaagatgctgttgattggctggtggactctggtatgccaaacatccgt
gagaaactgcaggaactggactcgttggatattcggtatcacacgctccgcataatcttc
agtgaatatgtgcactatcttctggtgatgtcgtccagtataaagcaagccatgaaagat
tttagtacagatccggacttgtggtctttagggaaaagtgaggaaatgaaaaacaaagga
aatgaacagtttcagagaaagaaatatgattcggctcttaaatggtacacgaaagccata
aaataccatccaaacaatcacatcttgtatgggaacagagctctctgttttatacgttct
gagaaatatctgaaagctgtcggtgatggaaagagagccgttatattacagccggactgg
gcaaagggtcattatcgcttctgtgatgccctcttctatctcggggaacatcagaaagct
ctggaagcaaacagacacgcacagaacgcctgtggcagagaccccgagggatataaagat
cttgtgcagcagtttgagagattccagacagaacttcaggaaaaaaaagctgagatgaag
tctaagaagatggaaaccaaaaaagcgagagcgcatgtgaccagtgattcttcatctcag
cctctgaaatccagtcatatatctgaacctgcatctgactcaacagttcaggataatctg
caacaatcagaaaagcagcagcagcatctgcctgaaagtttagaaaactcagaagctcca
gctgaagacaaaagtgaagcacacaaagacttaaacagtgaaatgactccacggaagagt
aagaaatcatatttgaacactccagagaagccggcggtccggagcaaacatccacccact
ccagagaagccggcggtccggagcaaacatccacccgctccagagaagccggcggtccgg
agcaaacatccacccgctccagagcgagccgtcgttccagagccgcaggagacggtgagt
gatgttactatgaaagaacgcttctgtgctgcggttcaggagggtcaggaggctctgaat
gaccaacgctgtcagaacgcacagcacgctttctctctggccgtcagtatgttggactcc
agcgtcatcaaggatctgggcttatcagagttggatatatgtgtactcctatatggatat
gcaacggcactgctggaaatcggtcaacctgaggaactggctaaagctcggagactgttc
atcgagttagagtcgtcagaaagaaagtttcagtcattggtgcaatatgggatgggcaga
gtttatctgaaggagaacaggtttgctaaagctcttgagcacttctccaatgcactgcta
ataattcagagaaacatcacacctggaaaacttacctggccaacaactaaagcaatactg
gaggaaacccaaccggcctgtttacaggaacatctggagaactttatagagatgtgtaaa
tttccacccaaaccagatgctgtctgccgtcattcacattgtttgtctcattctattgaa
atctacttcagtgatccagactttaagggctttgtacagttgatctgcagtcagggctgc
aaagttgagtttcatatgacctgctggaaaaaactcaaaaccctttcattcacagataag
aacgacaaggactttctaaaggattcatgttttacaccagactgtggaggtcaaatctgt
cacattgtaatatttggctcatctgggctcataaagtgtgagtttgaaacgtctattcct
aaactcagaccagctgggcgattgagaagcagacagcaatgtacaagtattaagaagatg
aaatctaaaaatgataaaaaacttagaaggaaacaacacagactgacagcttgtgctgct
cctcgagagagaaatgaagttattcctgcagatgacccggcaaagagagtgacacccgaa
cgctccgttattgtggatcgtgttttacatcaaattcatgaaaacaaagaactttttaaa
gaagaatctgtgaatatttcttgtgttttggatcatctacggccctggctggatttgtat
gagtgtaaaggtcatgagagcgctttaaaggtctatggagaagatatacggctgtcagag
ctggtggatcttctgttggagtccagtaaccgggtttgggcgcgactctttatcgagaaa
ctctgctcgtggcttcatattaaacccaaattacagcagtgggctcagcagctggataac
gcaggtctgaaggcagcggagtcgctcatcagtcggtacgcttctcatctccagcagctg
gacgtgaagccgctgctcacgtttaaaccccttcaggatgcatttatcaggacatttggc
accagtgcagatttatttgacagcagtggatttactttaatggaatatctcaaacgggct
cccgctaaagacacgcgtctgtttatttggacactagaggcgagtcgtgagcgttacgag
tcctgtcactttattcttgatcagtattttgaggatgatgctgtttgtttagtcattaaa
aagacggatgatgctgagaacaccaattctgtatttaagactaaaagcagacatcggaaa
aaaaagcagaaagattcaaagtctgttattcttctctctggaatgagaggtggacactcg
agagatgaagatgatgaagatgatctgttctctgaggaaaacgcttttgtgttcttcaat
agcgaagatccgttcagcgttcccgatcacctccgcggtcagctggcagaatttgaggaa
cagtatgctggatcagcgcacagaagctattataagacaattttggacaataatccagat
cccactaaagagagtttatacgattattttgctcagattcttgaagaacacggtcctctg
caagcgtcagatcctctgatggtcggcgagttggaaaactttcctctggaggcgcagcag
aaaatcaccgctgccggaggactggaagcgtttctgctggagtctctgcgatttgttatg
accaacaacaaaatgggactgatgaaacacgtggtgcctctcacagaatcaatgtcacat
cttaacccctcggctaaagagttctggcctcatacagacgttttgcccaacggcgtgtct
ctctttaacctgtcttcctttgataacggtgcttcgccgtcttttccgctgtccgttacc
tctgactctgttgttcttcctgatccgtacgcttttgagaatcccttggtagatgacaaa
ttttcggctgcggacgtcacgttagaccctgcggctcaggccgaagcatcgcagctgtac
gagaccgttggagaaaacgtacctgcggagtacagcagctgtgtatttgaaaactctgtt
tatatctctgaacggtccgccggagagagaggcggaggaaacgggtcaactcaaaagatt
gccgtgagcgtgcaggcttctgatgagagtaaagatgtttccatcagcactgagccctta
gtttcctttgagaggaacaatggtgacatgatacagaaagaaaaacaaacgctcagtctg
tcaaagaagcttctgcagatgaaggaagacgctgatgctgtgcagcagatgaggagcaag
cagatgacatcactgcaggaggaactggaggagatcacacacaggacacagatcgccggc
gcagaactcggcatgtttcagcagaaactagaagatgaagtaaagaaagaccagcaggag
aagaaggaaaaccaagaaaccctgaagatgctaaagatgaacatcaaagaactgacagat
cagcgtgaaagttttacaagagacatcagtgagaaaaccaaagagtatcagaccaaactg
gaagatttcctggacgtcagtaaccagtgtgcagccgagcggatgagtcttgaagatgaa
atcaagagacacagagacacctgtgtgaaggaccagaaaagatcactgatggctcagctg
tcagtccttcagaacagaagagatcacggcctgcgatgtctgaggggacgattggatgaa
gggaatatgattgtgaaacacctgacagaggcgtcgcacagtttcttctctgccatgctg
ctgtcagccttagatgactggaagaaattcataagtgacattgaagaaaaaatccacaat
gctgagatggagtttgagtctcagatgaatgaagtaaagaaaggcaccagactgtgttca
ctgccgcccgtgtctgtaccgagtcctcccgcagtaccggcgacagctcctgcggccttt
cagcagtctgggtcccacaacacgcacctccacagccatcacgggtcactgcagcccacc
cgaacccccacacccaccggccgcaacacgccgcagcccgcagagagacgtccggaggaa
tcccagcaacacgtcactgtgtacgacaggatgctggagcgtcttaacgtcatgtttcct
cattataacaagatggtgttaagtaaattcatccaggaggtgcgtttggctaacggaggc
actctcaacgcattgacctatgatgatgtcgtcaacagagtcgcacagctgatcctggac
catcaggagaacgtgcgggagatgacggttagagacgagagggactctgctcagggttcg
actttatctgatgacttaggcaggtggactggagcgcccccgctgacacacgtgtggaag
aacatgtcagaaaaacatcgcaacgctgcgctggctctcaacatggaggatccgtgtatc
atctgtcatgaggacatgagcgctgaagatgtttgtgtgctggagtgtcgccacagtttc
cacagacagtgtataaagtcatggctgaaggaacagagcacatgtcccacgtgtcgagaa
catgcgctgttaccagaagattttcctgtgctgcccggcagacatcgcaagagtcaagcg
tctgccgccacatttaactga
DBGET
integrated database retrieval system
