Paramisgurnus dabryanus (large-scale loach): 135748284
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Entry
135748284 CDS
T10799
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135748284 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135748284 (kdm2ab)
04121 Ubiquitin system [BR:
pdab04121
]
135748284 (kdm2ab)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135748284 (kdm2ab)
Enzymes [BR:
pdab01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
135748284 (kdm2ab)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
135748284 (kdm2ab)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135748284 (kdm2ab)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
135748284 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
135748284 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
LRR_6
F-box
Cupin_8
Motif
Other DBs
NCBI-GeneID:
135748284
NCBI-ProteinID:
XP_065122531
LinkDB
All DBs
Position
16:complement(13360757..13381092)
Genome browser
AA seq
1250 aa
AA seq
DB search
MEEEASRYSKRLRAGTRRRYQDDISDDEIEGKRSFDVEEKLKCDRYNSDLVRVMEGEDFT
LEYIQREGLRDPIVFKKADGLGIKMPDPDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMSM
GQWRRYYETPPSEREKLYNVISLEFSHTKLENLVKRPASVDMIDWVDNMWPRHLKERQRD
ATNVITDMQYPKVQKYCLMSVEGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTPQNLEL
YENWVLSGKQGDIFLGDKVSACQRIELKQGYTFMIPSGWIHAVYTPMDTMVFGGNFLHSF
NIPMQLNIYNIEDRTRVPSKFRYPFYYEMCWYVLERYLYCLTNTSHLTPEFQKHSLGIGL
TQEDVIKQETSDHEENVKEESEEEEAPATRPGVKVHLTPLELEGLSQLLEKLEDLPVHKK
CVPAGIRNAPALLSDMRKLLQEHANDNPKLSYTGEPIVKWPKRPSWYQPPSPPPTPQYRP
RTPGSGSILPPVPRPVKPSSSISALRRRRVRCKRCQACQRKECGNCNYCRDMRKFGGPGR
LKKSCVLRQCLAPALPLTAVCAICKEGCQESEDSESFQSLMECSECAQITHPECIEVPGD
GIINKDLPSCWECPKCVQGKEIRSSSSSSDDESESSVSNGSVSSGPPAKQAYREGIGVGG
LRMRRRGRPPLSPYSLPLTRSRRQPPPSQRLLLQHQQNRKRAGALELQLRKRIKLERKKI
LQSTRSSVSLSPKLLRQRSLERGGIVRPTPTRSATRGRGVSSCRGRGVRLRGGGRGGGLR
ERMEMDVDVEPDDSVDEEQEERKENGQCDGKENRPHRRGGKAGEEENGDGHQNGESEGNS
EGGEPTRSDTSVVLTDDTRGHGSCVTVTLQPSRGRRDPSTIVPKLEANLSPRSLPLDPKT
LLRPPLRNGAARSTSPHSPRTLTRSTSKHQHLAHSLRSNFKNSSHHLTRERIGKKTRSEK
EKSSNSCSSYTLQVSREQNGGNEPGWEREVWVSVFRYLTRAELCVCMAVCKSWYKWGCDK
RLWTRISLSRCRSISPQALTGIIKRQPVTLDLSWASISKKQLSWLINRLPGLKDLVLSGC
NWTSISALSSPSCPLLRSLDLRWADGIKDPQFRELLNPPGSDNRSQLKNMQCLWLCGLEL
TEATLRLIIRHMPLLTRLELSHCPITDGALNLLSAVGSSTRNTLTHLNLAGCSRLTDRCL
VYLRRLSCLSVLDLRDCKGVSRKACESFISELSVNALYCLSDDKLIQRIS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaggcctcccgctatagcaaacgcctgcgggcaggcacacggcgacggtac
caggatgacatttcagatgacgaaatcgagggcaagaggtcttttgacgtggaagagaaa
cttaaatgtgatcgatacaactcggatctggtcagagttatggaaggggaagactttacc
ttggagtacatccaacgggagggacttcgagaccccattgtctttaagaaggcagatggt
cttggaatcaagatgcctgatccagacttcagtgtcagtgatgtgaagttgtttgtgggc
agtcgcaggatggttgacgtgatggatgtgactactcagaaaggcattgagatgtcaatg
ggccagtggaggagatactacgagacgccaccatcggagagggaaaagctgtataatgtt
atcagcctcgagttcagtcatacaaaactagagaatctggtcaagagacctgcctcggtt
gacatgattgattgggtggacaacatgtggccaagacaccttaaagaacgacagagagac
gctactaatgtaatcacagacatgcagtatcctaaagtacagaagtattgtctgatgagt
gtcgagggatgctttacagatttccacatagactttggtggcacatcagtctggtatcac
atcctcaggggaggaaaggtgttttggttgatcccgcccacacctcagaacctggagctc
tatgagaactgggtgttgtcagggaaacagggtgacatctttctgggtgataaagtctcg
gcgtgccagcggattgaactgaagcagggttacacatttatgatcccttcagggtggatc
catgccgtgtacaccccaatggacactatggtgttcggtggtaattttctgcacagcttt
aacattcccatgcagctcaacatttacaacattgaggaccgcacgcgggtcccatctaag
ttccgttaccctttctactatgagatgtgctggtatgtgctggagcgttacttgtactgt
ctgaccaacacttctcacctcacgcctgagttccagaagcactcgctgggcatcggcttg
acgcaagaggatgtgataaaacaagaaacaagtgatcatgaggaaaatgtcaaagaagag
tctgaagaagaagaggcacctgctacccgtccaggagttaaggttcacctgacaccctta
gagttggagggacttagccagttactggagaagttggaggacctgccagtgcacaagaaa
tgtgtaccagcaggcatcagaaacgccccagcactgcttagtgacatgcggaaattgcta
caggaacatgccaatgataaccccaaattgtcttacactggagaaccaattgtcaaatgg
cccaaaaggccctcatggtatcagccaccctctcctcccccaactccgcagtaccggcca
cgcactcccggttctggttccattctgccgccagttcctcggcccgtaaagccgtcttcc
tccatctctgctttgaggcgccggcgcgtgcgctgcaaacgctgccaggcctgtcagcgc
aaagagtgtggcaactgcaactactgtagggacatgaggaagttcggaggaccaggcagg
ctcaagaagagctgtgtactccggcagtgtcttgcaccggcgctgcctcttactgcagta
tgtgccatatgcaaggaaggctgtcaggagtctgaagactcggagtctttccaaagcctt
atggaatgttctgaatgcgctcagatcactcatccagaatgtatagaggtgccaggggat
ggtattatcaataaggaccttccaagttgttgggaatgtccaaaatgtgtccagggcaaa
gaaatcaggtcttccagtagtagtagtgatgatgagtcggagagcagtgtgtccaatgga
agtgtctcatcggggcctccagccaagcaagcatacagagaggggattggagtggggggc
ttgcgtatgaggcgtagaggaagaccgcccctctctccctactctctgcctctgacccgc
tcccggcgccaaccgcccccttctcaaagacttctgctgcaacaccagcagaacaggaaa
agagccggagctttggagttacaactcaggaaaaggataaaattggaaagaaagaaaatc
ctccagtcgacccgttcgtctgtctctctttctccaaagctcctgcgtcagcggagtctg
gagagagggggcatcgtcaggccgacacccaccagaagcgctacccgcggcagaggcgtg
tcctcttgtcgtggaagaggagtgcgactcagaggtggtggccgaggtggaggtctgcga
gaaaggatggagatggatgtagacgtagaaccggatgattctgtggatgaagaacaagag
gaaaggaaggagaatggacagtgtgatggtaaagagaaccgtccccatagacgtggtgga
aaagcaggtgaagaggagaacggtgatggacatcaaaacggagagagtgagggcaacagt
gagggcggagagccaactcggtcagacacttctgtggtactaaccgatgacaccagaggc
catgggtcatgcgtcacggtcactttgcaaccatccagaggtagacgtgaccccagcacc
attgtacctaaactggaagccaacctatccccgagaagccttccgctagaccccaaaacc
ttgctgcgtcccccattgcggaatggcgcagctcgctcgaccagtcctcattcaccacgc
actttgacaaggagcacgtccaaacaccaacatttggctcatagtctaagatcaaacttt
aaaaattcctctcaccaccttactcgtgagagaattgggaaaaagacacgatcggaaaag
gaaaagtcttccaactcctgttcaagttacacgttacaggtctcgcgagagcagaatgga
gggaatgagcctggctgggagagagaggtgtgggtgtctgtgtttcgctacttgactcgg
gcagagttgtgcgtgtgcatggccgtttgcaagagctggtacaaatggggatgtgacaag
cgtttatggacgcggatcagtttgagccgatgtcggtcaataagtccgcaggccctcaca
ggcatcatcaaacggcagcctgtcacgctggacctctcctgggccagcatctctaaaaaa
caactctcctggctcatcaaccgactgccagggcttaaggatctggtgctgtcaggatgt
aactggacatcgatctcagcactgagctctccaagctgtcctttacttcgctctttagac
ctacgttgggctgatgggatcaaagacccacaattcagggagctgctgaacccaccaggc
agcgataaccgttcccagctaaagaacatgcagtgcttgtggttgtgtggtttagagctg
actgaagccacgctcaggctgatcatcagacatatgcctctgcttacccgtctggagctt
tcacattgtcccatcacagatggtgctctcaatctcctcagtgctgtggggtcctccaca
cgcaatacacttacacacctcaacttggcaggttgcagtcgcctgacagaccgatgtttg
gtgtacctgcggcgtttgtcctgtctttccgtgttggacctccgtgactgcaaaggggtc
tcgcggaaggcgtgcgaaagctttatctctgagctgtctgtcaacgccctctactgccta
tcagatgataagctcatccagaggatatcctaa
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