Paramisgurnus dabryanus (large-scale loach): 135749230
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Entry
135749230 CDS
T10799
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135749230 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pdab04052
]
135749230 (bdnf)
Cytokines and neuropeptides [BR:
pdab04052
]
Cytokines
Growth factors (RTK binding)
135749230 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Motif
Other DBs
NCBI-GeneID:
135749230
NCBI-ProteinID:
XP_065123815
LinkDB
All DBs
Position
2:complement(29539516..29565596)
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AA seq
369 aa
AA seq
DB search
MAVIAALANRSRGPRHQLRMKQMPFRLGGSLLLSCTAFCSESGPSLCLVLRQSGAPVGRQ
QAERTGEALLRIWIFLNAPPSPTSPLLRKFQQVRRVMTILFVTMVISYFSCMRAAPMREI
PGVQGGHRAEGYLGAAAAAAAAAVTSGSRGHGTPQSGGGLPSLTDTFEQVIEELLEVEGE
ATQQLGPGADQGQGGGGPAAAVAANSKDVDLYASRVMISNQVPLEPPLLFLLEEYKNYLD
AANMSMRVRRHSDPARRGELSVCDSISQWVTAVDKKTAIDMSGQTVTVLEKVPVTNGQLK
QYFYETKCNPLGYTKEGCRGIDKRHYNSQCRTTQSYVRALTMDSKRKIGWRFIRIDTSCV
CTLTIKRGR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcatcgctgcgctagcaaatcgcagccgtggccccagacaccaattaagaatg
aaacaaatgccttttagactgggcgggtccctccttctctcctgtactgccttctgctct
gagagcggtccctccctctgcctcgtcctgaggcagagcggggcaccggtaggacggcag
caagcggagagaactggcgaagccttgctgcggatctggatatttttaaatgccccccca
tcccccacctctcccctccttcgaaaattccaacaggttagaagagtgatgaccatcctg
ttcgttactatggttatttcatacttcagttgcatgagagctgcgcccatgagagagatc
ccgggtgtgcaggggggccaccgggctgaaggctacctgggcgctgctgccgcggcggcc
gccgccgccgtcacctcgggcagccggggccacgggactccacagagcggtggggggttg
ccctcgctcacggacactttcgagcaggtgatcgaggagttgcttgaggtggaaggggag
gcaacgcagcaactgggccccggggccgaccagggccaaggagggggtggtcccgcagca
gcagtcgcagcgaactcgaaggacgttgacctgtatgcctcgcgggtgatgatcagcaac
caagtgcctttggagccaccgttactctttctcttggaggaatacaaaaactacctggac
gccgccaacatgtcgatgcgcgtgcggcggcactcggaccccgcgcggcgaggggagctc
agcgtttgtgacagtattagccagtgggtgacagctgtggacaaaaagacggccatagat
atgtcgggccagacagtcaccgttctggagaaggtccccgtgactaacggtcagctgaag
caatacttttacgagaccaaatgcaaccccttagggtacacaaaggagggctgccgagga
atagacaagcggcactataactcacaatgccggacaacccagtcttacgtgcgagccctt
accatggatagcaaaaggaagatcggctggcggtttatacggatagacacttcgtgtgta
tgcacattgaccataaagaggggcagatag
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