Paramisgurnus dabryanus (large-scale loach): 135766665
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Entry
135766665 CDS
T10799
Symbol
ptprfb
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04514
Cell adhesion molecules
pdab04520
Adherens junction
pdab04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135766665 (ptprfb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135766665 (ptprfb)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
135766665 (ptprfb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdab01009
]
135766665 (ptprfb)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135766665 (ptprfb)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
135766665 (ptprfb)
Protein phosphatases and associated proteins [BR:
pdab01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
135766665 (ptprfb)
Cell adhesion molecules [BR:
pdab04515
]
Immunoglobulin superfamily
Type II RPTP family
135766665 (ptprfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Interfer-bind
fn3_2
Fn3_VIN3
Tc-R-P
PTP-SAK
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Ig_C17orf99
Fn3_ELFN
ICAM_N
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
135766665
NCBI-ProteinID:
XP_065132086
LinkDB
All DBs
Position
6:complement(20880424..21095248)
Genome browser
AA seq
1918 aa
AA seq
DB search
MVPNICPSVPVLPSGLLLLLLLSCAQFSSQADSLPNFIKSPEDQTGISGGVASFVCQAAG
EPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSLGEINT
SAKLTVLEENQIPHGFPTIDMGPQLKVVERTRIATMLCAASGNPDPEITWFKDFLPVDIN
SSNGRIKQLRSGGSPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVPP
RFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMAGEVELTKDEEMPVGRNVLELTNIRQ
SANYTCVAISSLGMIEATAQVSVKALPKPPTSLIVTETTATSVTLTWDSGNPEPVSYYII
QYRAKVSDTNFQEVDGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETRTGEQA
PSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYTSDLDAPLSAWQKHNTYDSRL
TTISGLTTDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELDTRIMLTW
LWPVQDPIIKYELQYWEADSNNKIHVTFNPAGSYAVEGLKPDTLYKFSLAARSEMGLGVF
TQPIEARTAQSAPSAPPQDVHLLSLSSTSIKVSWVAPPAASRHGAIVRYTVSYQAVNGED
TERHDVTDIGADASSYVLEGLEKWTEYQVWVRAHTDVGPGPESTAVRIRTNEDVPGAPPR
KVEVEALNSTAIRVTWKPPLSGKQNGQIRGYQVIYSRLENGEPRGQPVLIDVSLPEAQWK
IEESTEYEANITGLLPETSYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMIISTTIG
NTALIQWQPPKDMVGELMGYRLRYKRLEEDTYVVREFARTDDHHTATDLHKGATYSFHLS
ARNRAGDGEEYIKEIITPEDVPSGFPANLRVVGLTTSTTTLEWEPPALSERNGRITQYKV
VYSDINSKLNSTISTNETKMIIQGLRPDTTYTIRVQAFTSKGSGPLSPSIQSRTMSTSPA
FATSFGVKAVMKTSVLLTWDIPENYKPQVPFKILYNQQSVEVQGNLKRKLITRLQPNTNY
SFVLMSRVNNAGGLQQQVSIRTAPDLFKTKPALYNAEQTSTGKLTINLPKVPTTAPVRWY
YIVVVPVALKSSRKWANPDEMELDELLESSEGAQFRRRRHVGAIRPYITAKLNYLPDTFT
LGDEQAYNGFFNRPVPDNQSYLCFVMAELKDNYSVTTNEKQRTFSASPYSDPIEVVTMVT
RTVTEPVIEQPEMLWVVGPVLAVVLIIIIVIAILLFKRKRASPLPKEDHSNGVKDCLLAN
SSDPVEMRRLNYQTPGMREHPPITVCELADHIERLKANDALRFSQEYESIEPGQQFTWEN
SNLEVNKPKNRYANVIAYDHSRVVLTPVDGVPGSDYINANYIDGYRKQNAYIATQGPLPE
TLSDFWRMVWEQRATTIVMMTRLEEKSRVKCDQYWPIRGTETYGMIQVTMLDAVELATYS
VRTFALYKNGSSEKREIRQLQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCS
AGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAAT
CGNTEVPARNLYAHIQKLTQPPAGETVTSMELEFKRLANSKAHTSRFISANLPCNKFKNR
LVNIMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYIATQGPLAETTEDFWRMLWE
HNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARD
GQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVF
ITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaatatttgcccatcagtgcccgtcctgcccagtgggctgcttcttctgctg
ctgctgagctgcgcgcaattctcctctcaggcagacagcttgccaaatttcatcaaatct
ccagaggaccagacagggatttcaggaggagtggcatcttttgtgtgccaagcagcgggt
gagcccaagcctcggatcacatggatgaagaaaggaaagaaagttagctcccagcgcttc
gaggtgatagaatttgatgatggctcaggctcagttctccgcatccagccgcttcgtacg
cacagagacgaagccatttatgagtgcacagccaccaatagcctgggagaaatcaacacc
agcgccaaactcaccgtgctggaagaaaaccagattcctcacggcttccccaccatagac
atgggtcctcagctgaaagtggtagagcgcacaagaatcgccacgatgctgtgtgccgcc
agtggcaaccctgacccggagatcacctggttcaaggacttcctgcccgtagacatcaac
agcagcaacggacgaatcaaacagcttcgctcagggggttcaccaatacgaggagctctg
cagatcgagaacagtgaagaatcagaccagggaaaatacgaatgtgtggctacgaacagc
gctggaacgcgctactctgcccctgccaatctctacgtgcgagtacgacgagtaccacct
cgtttctccatcccgcccaccaatcatgaggtgatgccagggggcagcgttaacctcacc
tgtgtggcggtcggggctcccatgccctatgtcaaatggatggctggtgaagttgagctt
accaaggacgaggaaatgcctgtagggcgcaatgtgctggagctcaccaacatccgtcag
tctgccaactacacttgcgtggccatctcctctcttggtatgattgaggcaacagcacag
gtttctgtcaaagctctaccgaagccccctacatccctaattgtgacagagactacagct
acaagtgttacgctcacatgggactctggaaatcctgagcctgtgtcttactacattatt
caataccgtgccaaggtctcggacactaacttccaggaggtcgacggtgttgccaccaca
cgttacagcatcggtggtctcagcccttattctgagtatgagtttcgcgtcatggctgtc
aacaacattggtcgcggaccacccagtgaccctgtcgagactcggacgggtgagcaggcg
ccgtcctctccccctctacacgtccaggcacgtatgctgagtgctagcaccatgttggtg
cagtgggaacctccagaggaacccaatggtcaaatcagaggttaccgtgtctactacacc
tctgatctggatgcccctctcagtgcttggcagaaacacaacacgtacgacagccgtctt
accaccatctcaggcctgaccaccgatattacatacagcctgcgtgtgttgggattcacg
tctgtaggggacggacccccatctgatgtgttgcaggtcaagacacagcaaggagtcccc
gctcaaccatccagctttgaggccgaggctgaactggatacacggatcatgctaacttgg
ctgtggcccgttcaggatcccatcattaaatacgagctgcagtattgggaggccgactcg
aacaataagatccacgtcactttcaaccctgccgggtcctatgcagtggaaggcctgaaa
ccagacacgctgtataaattctctttggcggctcgctctgaaatgggtcttggggtcttc
actcaacccattgaagccagaactgcccagtccgccccctctgccccccctcaagacgtg
cacctgctcagtctgagctcaaccagcatcaaggtgagttgggtggctccaccagccgct
agtcgccacggcgctatagttcgctacacggtcagctaccaggcggtgaacggtgaagac
accgagcgtcatgacgtgaccgatatcggagcagacgcctccagttatgtgctggaggga
ctggagaagtggacagagtatcaggtgtgggtgagagcgcacaccgatgtgggccccggc
ccagagagcacagctgtgcgtattcgtaccaacgaggacgtgccgggagccccacctcgg
aaagtagaagtggaggctttgaactccacggctattcgcgtgacatggaagccgcctctt
tctgggaagcaaaatggccagatccgtggatatcaggtcatctactcccgcctggagaat
ggggaaccacgtggacaaccagttcttatagatgtatctcttccagaggcacagtggaaa
attgaggagtccacggaatatgaggccaacatcacaggacttttaccggaaacctcttac
tctgtaactgtggcagcttatacaacgaaaggtgatggagcccgcagcaaagccaaagtc
gtcactactactggagcagtgcctggaaaacccaccatgatcatcagcaccactatcggc
aacacagcactgatccagtggcagcctcctaaggacatggtgggagagttgatgggctac
cgcctgcgatacaaacggttagaggaggacacctatgtggtccgggagttcgcccgcaca
gatgatcaccacaccgccacagacctgcacaaaggcgccacctacagctttcacctcagc
gccaggaaccgcgcgggagatggtgaagagtacataaaagagatcatcactccagaggac
gtgcccagcgggtttcccgccaacctgcgcgttgttggcctgaccacatctaccaccacc
ctggaatgggaacctcctgcgctctctgagcggaatggtcgaatcacacagtacaaagtg
gtgtacagtgacataaacagcaaactgaacagcaccatcagtacaaatgagaccaagatg
atcatccaaggacttaggccagacaccacctataccatccgtgtgcaagccttcaccagc
aagggaagtggtcccttaagccccagtatacagagcaggaccatgtctacatcgcccgca
tttgccacaagctttggtgtcaaagctgtaatgaaaacttctgtccttcttacatgggat
atacctgaaaactacaaaccccaagtgccttttaagatcctctataaccagcagagtgtg
gaggttcaaggtaacctgaaaaggaagctgatcacgagactgcagccaaacaccaattac
tccttcgtgctgatgagcagagtgaacaacgccgggggactgcagcagcaggtgtccatc
cgcaccgcgcctgacctgttcaaaaccaaacctgctctttacaatgcagaacaaaccagc
acaggcaaactcaccataaacctacctaaagtgcccaccacagctcctgtcaggtggtac
tacattgtggtggtaccagtggctcttaaatcttcacgcaaatgggctaatcctgatgaa
atggagcttgatgagcttcttgagtctagcgagggagcccagttcagaagacgacgtcac
gtaggtgccataaggccgtatatcaccgcaaagctgaactatctcccagacactttcacc
ctgggtgacgagcaggcttacaatggcttcttcaatcggcccgttcccgacaaccagtca
tacctgtgctttgtcatggctgaactcaaggataactactccgttaccaccaacgagaaa
cagcggactttctcagctagcccatactcggaccccatcgaggtggtgactatggtaacc
agaactgttactgaacccgttattgaacagcccgagatgctttgggtcgtgggcccagtg
ctcgccgtggtgctcatcataatcatagtcatcgccatcttgctctttaagaggaaaagg
gcatcgcccctacccaaagaggatcactctaatggtgtgaaggattgtctgctcgccaac
tcatctgatccagtcgaaatgaggagactcaactaccagacgccaggaatgagggaacac
cctcctattactgtttgtgaactggcagaccacattgagagactcaaggccaatgacgcc
ctccgcttttcccaggagtatgagtcaattgaaccaggacagcagtttacgtgggagaat
tccaacttggaggtcaacaagccaaagaaccgctatgccaacgttatcgcttacgaccac
tcaagagtcgttttgacccctgtggatggtgtaccaggcagtgactacatcaatgctaac
tacattgacggctaccgtaagcagaatgcctacatcgccacgcaaggccccctgcccgaa
accctgagcgacttttggaggatggtgtgggagcaaagagccactactatagtcatgatg
actagattggaagagaagtccagggtcaagtgtgaccagtactggcctatccgtggcaca
gagacgtacgggatgatccaggtgaccatgctcgacgctgtggaattggcaacctacagt
gtgcgcacttttgccctttacaagaacggctctagcgagaaacgagagatcaggcagcta
cagttcatggcttggcctgaccacggagtgcctgaataccccacccccatcctagccttc
ctgcgcagggtcaaggcctgcaaccctcctgatgctggacccatggttgtgcattgcagc
gccggagtgggccgcactggctgcttcatagttatcgatgccatgctggaacgcatgaag
cacgagaagacggtggatatctacggtcacgtcacgtgcatgagagctcagagaaactac
atggtgcagacagaggaccagtacatcttcatccatgaggccttactggaggccgccacc
tgtgggaacaccgaagttcctgcccgaaacctttacgcccacattcagaagcttactcag
ccaccggctggagagacggtcacatccatggagctggagtttaagaggctcgccaactcc
aaagcccacacctcacgattcatcagcgccaacctgccctgcaacaagttcaaaaaccgg
ctggtcaatatcatgccctttgaatcaacacgggtgtgcctccagccaatcagaggagtg
gagggttctgactacatcaatgccagctgtatcgacggatacagacagcagaaggcctat
attgccactcagggccctctggcggagaccactgaagacttttggaggatgttatgggag
cacaattccactattgttgtgatgttgaccaaactcagagaaatgggacgggagaagtgc
catcagtactggcctgctgagcgctccgcccgctatcagtactttgtggtggatcccatg
gctgaatacaacatgccccagtacatactgagagagttcaaagtcacagatgccagggat
ggccagtccagaaccatccgccagttccagttcaccgattggccagaacagggagtgcct
aaaactggtgaaggatttatcgatttcattggccaagttcataaaaccaaggagcaattt
gggcaggacggaccaatcactgtgcactgcagtgctggagtaggacggacaggtgttttc
atcactctcagtattgtcctggagaggatgagatatgagggtgtggtggatctgttccag
acagttaagactctgcgcacacaaaggcctgccatggtgcagacagaggaccagtaccag
ctgtgctacagagcggctttggagtacctggggagctttgatcactatgcaacgtaa
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integrated database retrieval system
