Paramisgurnus dabryanus (large-scale loach): 135767042
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Entry
135767042 CDS
T10799
Symbol
dhx9
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135767042 (dhx9)
03012 Translation factors [BR:
pdab03012
]
135767042 (dhx9)
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135767042 (dhx9)
5.6.2.6 RNA 3'-5' helicase
135767042 (dhx9)
Spliceosome [BR:
pdab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135767042 (dhx9)
Translation factors [BR:
pdab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135767042 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_C
Dicer_dimer
HA2_N
ResIII
AAA_19
ATPase
nSTAND3
AAA_22
PhoH
AAA_14
Motif
Other DBs
NCBI-GeneID:
135767042
NCBI-ProteinID:
XP_065132702
LinkDB
All DBs
Position
6:32593573..32612888
Genome browser
AA seq
1280 aa
AA seq
DB search
MADIKNFLYVFCGKKKITPNYDIRAAGNKNRQKFTCEVRVEGYNYIGMGNSTNKKDAQTN
AARDFVNYLVRTKEINACDVPALGVSMPDGGNGGDGGEGGSGFGNLPSNCPLPPHLAVKS
EIGETKGQESECSAPVPGITGLGYSGMNNAQWERGANLQDYYSRKEEQDAKATYESEEVD
LNAGLHGNWTLDNAKARLNQFFQKEKNQTDYKYSQVGPDHNRSFIAEMTLFVRQLGRKIF
AREHGSTKKLAAQSCALSLVRQLYHLGVIEAYTGQTKKKDGETLDVYEVNLSDDLPNQVM
SIVQELGLQIPPPPQDPNSPVSLVQGKLAQFEPSQRQSTAGVVPWSPPQVNWNPWTSSNI
DEGPLAFCTPEQINMDLLSELNYQLEQDRNLQVTLAERNQLPVKNFEKEIMGAIHNNSVV
IIRGATGCGKTTQIPQYILDEFVKGGKASECNIIVTQPRRISAVSVSERVAFERGEEVGK
SCGYSVRFESALPRPHASILFCTVGVLLRKLEAGIRGISHVIVDEIHERDLNSDFLLVVL
RDVVQAYPDVRIILMSATIDTSMFKEYFFNCPVIEVHGRAHPVQEYFLEDCIQMTQFVPP
PMDRKRKDKDEEGAGGDEEVNCNVICGPEYSPETKRAMSQLNEKETPFELIEALLKYIET
LKVPGAVLVFLPGWNLIYSMQKHLEMSPHFGGPQYRILPLHSQIPREEQRRVFEPTPDGV
TKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAG
RVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLRLGAIGHFLSKAIEPPPL
DAVIEAEHTLRDLDLXMXTLRTPALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVG
DAACTISAASCFPEPFISEGKRLGYVHRNFAGTRFSDHVALLSVFQAWDEVRMGGEDAEI
RFCEHKRLNMPTLRMTWEAKVQLKEILVNVGFPEECLMNQLFNTVGPDNNLDVVISLLTF
GSYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFTTQDMQYPSPFFVFGEKIRTRAISAK
SMTLVSPLQLILLGSKKITSNGEIVELDEWIKLRIPHDVAGGVAAMRAAFEALVVEVTKD
PEYIRNMDPMNERLLNVMRLVSRPSSAGMNLMATNKRFGDGPRPPKMARTDFGGGGGGFG
GRGGGYGGGGGGGYRGGGYRGGGGGGYRGGGGYQGGGGGYRGSGGYRGGGGYRGGGGYRG
GGGGGGGGFRGGWGGNRGGN
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggcggacattaaaaacttcctatatgttttttgtgggaaaaagaagataacgcctaac
tatgacatccgagcagctggaaataaaaacagacagaaattcacgtgtgaggtgcgtgtt
gagggttacaattacatcggcatgggaaactccaccaacaagaaggatgctcagaccaat
gctgcccgagattttgtgaattatcttgtcaggacaaaagagatcaatgcttgtgatgta
cctgctttaggggtcagcatgcctgatggaggaaatgggggtgatggaggtgaaggagga
agtgggtttggaaatcttccatccaattgtccactgccaccacatctggctgtgaagtct
gaaattggggaaacaaaaggacaagagtctgaatgttctgcacctgtccctgggatcaca
ggtttgggttactctggcatgaacaatgcccaatgggagcgaggagccaatctccaagac
tattactccagaaaagaggaacaggatgcaaaagcgacctatgaatctgaagaggttgat
ctgaatgctggcctgcatgggaactggactctggataacgcaaaggcccgtctgaaccag
ttctttcaaaaagagaaaaaccaaacagactacaagtatagccaagtgggaccggatcac
aacaggagttttattgccgagatgacactctttgtaaggcaactcggtagaaagattttt
gctcgtgaacacggctcaactaagaagctggctgcccagtcctgtgcgttgtctctggtc
cgtcagctttaccatctaggggtcatcgaagcctacacagggcagaccaagaagaaagac
ggagaaactttggacgtatatgaagtaaatcttagcgacgatctaccaaatcaagtaatg
agcatcgtgcaggaacttgggctccagatccctccaccccctcaggatcccaacagtcct
gtgtctctggttcaagggaagttggctcagtttgaaccttcacaaaggcagagcactgca
ggagtggtgccgtggtctcctccacaggtcaactggaacccctggaccagtagcaacatc
gatgaaggaccactggccttttgcaccccagaacagatcaacatggacctgctgagcgag
ctcaactatcaactggagcaggacaggaatctgcaagtgactctagcagaaagaaatcag
ctgcctgtaaagaactttgagaaagaaatcatgggcgctattcacaataactctgtggtc
atcatccgaggagccactggctgtggaaaaaccacccaaatccctcaatacatactggat
gagttcgtaaagggaggcaaggcatctgaatgcaacatcattgttactcagccaaggagg
atcagtgctgtgtcggtgtcggaacgtgtggccttcgaaagaggagaagaggtggggaaa
agctgcggctacagcgtgcgtttcgagtcggcactacccagacctcacgccagcatcctt
ttctgtacagtcggagtgttgctgagaaagttggaagctggtatccgtggcatcagtcat
gtgattgtggatgaaatccatgaaagagacctaaattctgatttcctgctggtggtgttg
agagatgtggtccaggcctaccctgacgtgcgcatcatccttatgtctgccaccattgac
actagcatgtttaaggaatatttcttcaactgtcccgtcattgaggtgcatggacgtgca
catcctgtacaagagtattttctggaagactgcattcagatgacccagtttgtaccacca
ccgatggataggaaaagaaaagataaagatgaagagggagcaggaggagatgaagaagtc
aactgtaatgttatttgtggacccgagtatagcccagaaaccaagcgtgccatgtcccag
ctaaatgagaaggaaactccctttgagctgatcgaggcgttgctgaagtacattgaaacg
ctgaaagtacccggggctgtgctggtcttcctgccaggctggaatctcatctattcaatg
cagaaacatctggagatgagcccacacttcggcggtccgcaatacagaatcctgccactt
cattctcaaatccccagagaggaacaaaggagagtctttgagcccacacctgatggtgtg
actaaggtcattttgtccaccaacattgcagagaccagcattaccatcaacgatgtggtc
ttcgtccttgactcctgcaagcaaaaagtgaagttgttcacctctcataacaacatgaca
aactatgccacggtatgggcctccaagaccaacctcgagcagaggaagggacgagccggc
cgagtgagacccggcttctgtttccacctgtgcagcagagctcgtttcgaaaagctggag
acccacatgactccagaaatcttccgcacgccgctacatgaggttgccctaagcattaag
ctgctgagactgggagccatcgggcacttcctctccaaagccattgagcctcctccattg
gatgctgtaattgaagcagaacatacgcttagagatttggacctttgaatgtaaacgttg
agaacccctgctttagacagtaatgatgagctgactccactgggacgcatcttagccaag
ctgcccattgaacctcgtctgggaaagatgatgattatgggatgcatctttaatgttgga
gatgcagcgtgcactatctctgcagcatcttgtttccctgagcctttcatcagcgaggga
aagcgtctcggctacgtccataggaactttgctggcacacgtttctctgatcacgtggcc
ttactttctgttttccaggcctgggatgaagtcaggatgggaggtgaggacgcagagatc
cggttttgcgaacacaagaggctcaacatgcccactttgagaatgacctgggaggctaaa
gtccagctgaaagagatccttgttaacgtgggcttccctgaagagtgcctcatgaatcaa
ttgttcaatactgtgggaccagacaataatttggatgtggtgatctctctgctgacattt
ggctcttaccccaacgtgtgttatcacaaagagaaaaggaagatcttgaccacagaggga
cgaaatgctcttatacacaaatcctctgtcaactgtcccttcaccacccaagatatgcaa
tacccatctcccttttttgtcttcggggaaaagatccgaacccgagctatctctgccaaa
tccatgactctcgtcagccctcttcagcttattctgcttggctcaaaaaagatcacatcc
aatggagaaatcgttgaacttgatgagtggatcaaattgcggattccccatgatgtagct
ggtggtgtggcggccatgagggcggcttttgaagccctggtggtcgaagtgaccaaagat
ccggaatacatcagaaatatggatccgatgaacgaacgtttgcttaatgtcatgcggctt
gtatctagaccctcttcagcgggtatgaacctcatggccactaacaaacgctttggagat
ggtccacgaccacccaagatggctcgtactgactttggaggaggaggtggaggctttggg
ggacgtggaggaggatacggaggaggtggtggtggtggataccgaggtggtggatacaga
ggaggaggcggtggtggatacagagggggtggaggctaccagggtggtggaggtggttac
agagggtcaggagggtatcgtggtgggggtggttacaggggaggtggagggtatagagga
ggaggaggaggtggtggtggtggtttccgaggtggctggggaggaaacagaggtgggaat
taa
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integrated database retrieval system
