KEGG   Paramisgurnus dabryanus (large-scale loach): 135770149
Entry
135770149         CDS       T10799                                 
Symbol
rad18
Name
(RefSeq) E3 ubiquitin-protein ligase RAD18
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdab04121]
    135770149 (rad18)
   03400 DNA repair and recombination proteins [BR:pdab03400]
    135770149 (rad18)
Enzymes [BR:pdab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     135770149 (rad18)
Ubiquitin system [BR:pdab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135770149 (rad18)
DNA repair and recombination proteins [BR:pdab03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    135770149 (rad18)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_6 zf-C3HC4 zf-RING_UBOX SAP zf-RING_2 zf-C3HC4_3 CpG_bind_C zf-RING_5 RING_XB3-XBAT31 zf-C3HC4_4 U-box zf-rbx1 zf-WRNIP1_ubi DUF1002 DZR_2 zf-RING_10 CapR
Other DBs
NCBI-GeneID: 135770149
NCBI-ProteinID: XP_065135929
LinkDB
Position
7:complement(26653289..26701599)
AA seq 434 aa
MAQLSEVDLPPNLSCLKNVDTLLRCPICFEFLNISMMTACSHNFCSLCIRKFLSYKLVCP
VCNSPTTDQDLRNNRILDDVVHSFQTARQQLCQSNFESPPISPENPVAMVKGKAARQKGL
KNETTTLSQFFQKKTPATTLSRAQTSLVHHFSVKEEPMEVFVQAPGRIKQEKVEKMIAKI
KEEKMDTSEIPSTSQNIKTAVKVECPVCGVGVSEQHINKHLDMCLSRDDKKEGLRSGGRR
KAMPKLVYTLISVPKLKKMLKECHLSAQGSREQLVRRHQDFTHIYNAQCDSLNPKSAEDI
AKEIENNERLRNQLDGKRKPVIVTTKNQTAEEIEGLHSIYRKQHSSEFSRLIAQVRGRLE
TSKKTQVRHEEGQSAEETDSKAAHSIQNPTQPLISTPLKAKTEVKDVMVKVSSRSSSPTI
SDVSVSSSISDMFS
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggctcaactaagtgaagtggatttgcccccgaacctgtcatgcctcaaaaatgtagat
actctgcttcggtgtccaatctgctttgagtttctcaacatcagtatgatgactgcatgt
tcacacaacttttgttctctctgcatacggaaatttctgtcttataagttggtgtgccct
gtttgtaactcgccaacaacagatcaagatctgagaaacaacagaatattagacgatgta
gttcacagcttccaaactgcaaggcaacagctgtgtcagtcaaattttgaatcacccccc
atctcccctgaaaacccagttgccatggtcaaaggcaaagcagcaagacagaaaggtctc
aaaaatgaaacgaccaccctcagtcagtttttccagaaaaagacccctgcgacaactctg
tcaagggcccaaacaagcctggtacatcacttctctgtcaaagaagaaccgatggaggta
tttgttcaggcaccaggcagaatcaagcaggaaaaagtggagaaaatgattgcaaagatt
aaagaggagaaaatggatacatctgaaatcccttctacgtcacaaaacattaagactgcg
gttaaagtggaatgtcctgtctgtggagtgggcgtgtccgagcagcacattaataaacat
ctagatatgtgcttgagccgagacgataaaaaggaagggttgagaagtggtggaaggcga
aaagcaatgcctaaactggtgtacactctaatcagtgttcctaagctgaagaagatgctg
aaggaatgtcatctgtccgctcagggcagcagggaacagctcgtacgacgacaccaggac
tttacacacatctataatgcccagtgtgactctctcaaccccaaatcggctgaagatatt
gccaaagaaattgagaacaatgagcgattacggaatcaactggacggcaaacggaaacct
gttatagtcacaacaaagaatcaaacagctgaagaaattgaggggttacactccatatac
cgaaagcagcacagcagtgaattttcccggttaattgcccaggtcagaggtcgtctggag
acgtcgaagaaaacccaggtcagacatgaggaggggcagtcagccgaggagaccgactcc
aaagctgcacatagcattcagaacccaacccagcctctcatttctacaccactaaaggca
aagactgaagtgaaagatgtgatggtcaaagtttcatcaaggtcatcaagccctacaatc
agtgatgtgtcagtcagcagctccatttcagatatgttcagttga

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