Paramisgurnus dabryanus (large-scale loach): 135774984
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Entry
135774984 CDS
T10799
Symbol
lemd3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135774984 (lemd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pdab04812
]
135774984 (lemd3)
Cytoskeleton proteins [BR:
pdab04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
135774984 (lemd3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
DUF7475
Vpu
DUF3671
Motif
Other DBs
NCBI-GeneID:
135774984
NCBI-ProteinID:
XP_065141087
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Position
1:complement(29534962..29557256)
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AA seq
858 aa
AA seq
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MASAQLTDEELFSELKRLGFAPGPVTENTRPVYLKKLKKLREEQPQPRGSRSGKGRNSTG
AINNGGGSGNAAARAPGLSARPPGSDVTRRSSSGRPTPSEKRTIDRTGKFVLGFSSDESD
VEASQKKAGPNHGGASRRDRGSATQTPIRPAGTPAASRRSEHRYSLGLSVDRKSTSPWLA
KSSINADDRDNGEPDDDLEETETNSRALNGNKTFYVSSSRNSSTQVKDYSDTDEEEEEEE
ADRDRPRRFISRHSPPKTGYISAPGSEKTAAGAYDTPDFRSPVMAEKQREDDDKEPREFG
AGFMRHSYPQRSSVFSVDDSKNTNPSAFTKNHIDNGESETTGDNISSRFSIGLRPRFSSY
ATYRPNHSNHTGSNHSYSHSSPLKPKQHTTVPEDELLQQFKREEVSATGGFSAHYLSMIL
LTAACLFFLVLGLMYLRMRGSGTSEADAVIKSHPFGPEFDKHYEVKERDLILNLLLSLHD
YLANIAGEHDCGDPNNPLNRSVSFSEALEYLKLQNKAYENFIETSLEWVMKTKDVVGIRL
IAANPDQPIEYVSEISRLESIYPRMSFFCRFRRAFFTVIYRVLFILAGIGVVWGVVYYMK
YRWRREEEETRQMYEMVERIIDLMRSHNEACQENKDLQQYLPIPHVRDSLVQPQERKKMK
KVWDRAVKFLSANESRIRTETQRIGGADFMVWRWLQPSMSPDKMSSVPSKVWQGKAFPLD
RRNSPPNSLTPCLKIRNMFDPIMEEGENWHLAIQEAILEKCSDNDGIVHIAVDKNSREGC
VYVKCLSAEHSGKAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQALGCNTPLKPTSSSMN
SMSRLNQRSSRSNLLSFS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcacagttaacggatgaggagcttttttctgaattaaaacgactggggttt
gcccccggcccggtgacggaaaacactcggcccgtgtatctgaagaagctgaaaaagctg
cgggaggagcagccacagcctcgaggttcccggagcgggaaagggcgcaacagcaccggg
gcgatcaacaacggcggtggtagtggtaacgccgcggcgcgagctccgggattgagcgcc
aggccaccgggcagtgacgtcacgcgtcggagctctagcggacgtccgacgcctagcgaa
aagcgcactatagacagaaccggaaagttcgttctgggctttagctcggacgagtcggac
gtggaggcgtcgcaaaagaaagcaggcccgaatcacggcggcgccagcaggagagaccgc
ggatctgcgacgcagacacccatcaggcctgcgggaacacccgccgcctctcgcaggagc
gagcacagatattctctcgggttatccgtggacagaaagagcacatctccgtggttggct
aaatccagcataaacgcagatgatcgagataacggtgagcctgacgacgatttagaggaa
actgagactaatagccgggctctgaacgggaataagacgttttacgtgtcgagtagtcgt
aatagtagtacgcaagtcaaggattactccgataccgacgaggaggaggaagaagaggag
gctgatcgagaccgtccccgccgtttcatttccagacacagtccgccgaaaaccgggtac
ataagcgccccgggctcggagaaaactgcggccggtgcatatgatactccagacttcagg
agcccagtcatggctgagaaacagagggaggacgatgacaaggaaccgagggagttcggt
gcaggcttcatgcgccacagctacccccagcgatccagtgtgttctcagtggacgacagt
aagaacaccaacccgtccgcttttacaaagaaccacatcgataacggagaaagcgagacc
accggcgacaacatcagcagcaggtttagtatcggactgagaccgcggttctcctcttac
gcgacctaccggccgaaccactcgaaccataccggctcgaaccactcctacagtcattcc
tcacccctcaagcccaagcagcacaccacggtgccggaggacgagctcctgcagcagttt
aaacgagaggaggtgtccgccaccgggggcttcagcgcgcattacctgtccatgatcctc
ctgacggccgcctgcctgttcttcttggtcctgggtctcatgtacttgcggatgcggggt
tccggcacctcagaggcggatgcagtcattaagagccacccatttggacccgagtttgat
aagcactatgaagtcaaagagcgagacctcatcctgaaccttctcctttctctacatgac
tacctggccaatattgcaggagaacatgattgtggggatcctaataatcctttaaacaga
agcgtctccttcagtgaagccttagagtacctcaagctccaaaacaaagcctatgaaaac
tttattgaaacgtctttagaatgggtcatgaaaaccaaagatgttgtgggaataaggttg
atcgctgctaaccctgatcaacccatagagtatgtatcggagatctcaaggctggagtcc
atctatccccggatgtctttcttctgtcgcttcagacgggccttcttcaccgtcatctac
agagttctgttcatcctcgcaggcatcggtgtagtttggggtgtggtgtattacatgaaa
tacagatggcggagagaagaagaggaaaccaggcagatgtacgagatggtggagaggatc
atcgatttaatgaggagccacaatgaagcctgccaggagaataaggacctgcagcagtat
cttcccattcctcatgtccgtgactctctggtccagcctcaggaaagaaaaaagatgaaa
aaagtatgggaccgggctgttaagttcctttcagccaacgagtctcgcattcggacagaa
acccagagaatcggaggtgcggacttcatggtgtggaggtggcttcagccctcaatgtca
cctgataagatgtccagcgtgccctccaaagtgtggcaaggcaaagcatttccactggac
cgaagaaattcaccaccaaacagcttaacgccatgcttaaagattcgcaacatgttcgac
ccaataatggaggagggggagaactggcacctcgccattcaagaagccattttggagaaa
tgcagtgataacgatgggatcgttcacatagctgttgacaaaaactcaagagagggttgt
gtttacgtaaagtgcctttcagcagagcattctgggaaagcctttaaagcacttcatggc
tcctggtttgatggtaagcttgtgacggtgaagtatctgcgcctggatcgctaccaccag
cgtttcccacaagccctgggctgcaacacacccctcaagcccaccagctccagcatgaac
agcatgtcacggctgaaccagcgatccagcagatctaacttgctgagtttctcttga
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