Paramisgurnus dabryanus (large-scale loach): 135776525
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Entry
135776525 CDS
T10799
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdab01009
]
135776525
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135776525
Protein phosphatases and associated proteins [BR:
pdab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135776525
Ion channels [BR:
pdab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135776525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
135776525
NCBI-ProteinID:
XP_065143365
LinkDB
All DBs
Position
18:22209872..22244782
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AA seq
1015 aa
AA seq
DB search
MKPMAQLYYNKASNSPYRDRIPLQIVRAEVELSAKERAYLTAVEKGDYAGVKQALEEAEI
YYNININCLDSLGRSALLIAIENENLEVMELLLSHGVHMGDALLYAIRKEVVGAVELLLS
YRKLTSEKQVPSLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDHSDELDPRECRDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPIFSVVYLLAPKSMLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIVETDLHVQGPPPTIVEWLILPWVLGFIWA
EIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKMVAYFKYNSSRPRVDWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETQAVDEPNHCKGIRCERQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIVPSPKSVWYLCVWLHCRLCGHGESRQEDECKHENFREFTERHADNLLQNQHYQE
VIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKAAHRTYSPNS
EDTQHDEPAEPEEQREESGGDVGNRCGPWGRSSRSEASTSFTQSYRGGGSHFSVSALFKS
MAGTERRARARPETNGLGKDVSSSFVQTSNRLHRFSHSKKVSLQRLGTMMSRMNGHLPDP
QQSAYSISDRVPQADWCGPRALSELTRSELHLHTLGLRSTETEQNLMQSTSQQANGMDSL
FLGPPGHSLHRASGLTASSARLLASSDGLCQSWMDHCDSFGSSSWEQEESVTTQL
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatggcgcagctgtactacaataaggccagcaactcgccgtaccgcgaccgc
attccgctacaaatcgtccgggcggaggtcgagctgtccgccaaagaacgggcttacctg
accgcggtggagaagggcgattatgctggagttaaacaggctctggaggaggcagagatt
tattacaacattaacatcaactgcctggactcgctgggccgtagcgccctactcattgcc
atagagaatgagaacctggaggtgatggagctgctgctgagtcacggcgtgcacatgggt
gacgcgctcctctacgccatccgaaaggaggtggtgggagctgtggagctgctgctgtcc
tacaggaagcttacaagcgaaaaacaggtaccttctctcatgatggacacccagttttcc
gagtttacacctgatatcacaccgatcatgttggctgcccacaccaacaactatgagata
atcaagctcttggtccaacgaaaagtcactatcccccgacctcaccagatccgctgtgac
tgcgtggaatgcgtttccagttcggaagtggacagcctgcgtcattcccgttcacggctg
aacatctacaaaaccctcgccagcccctctctcatcgccctgtccagtgaagaccccata
ctcacggccttcaggctgggctgggaactgaaggagctcagtaaggtggagaatgagttt
cggcaggaatacgaggagctatcgcagcagtgtaaactcttcgctaaagatctactagat
caggcgcgcagttcacgggagctggagaccatcttgaaccaccgggatgaccacagtgat
gagctggaccctcgcgagtgcagagacctggccaagcttaaactggccattaagtaccat
caaaaagagtttgtagctcaacccaactgtcagcagttactggccacactgtggtatgat
ggttttccaggctggagacgacgtcactgggcagttaagctggtcacatgctttatcatc
ggactactttttcccatcttctccgtcgtgtaccttctggctccaaaaagcatgctggga
ctcttcatcaagaaacctttcatcaagttcatctgccacactgcatcctatctgaccttc
ctctttctccttctcctcgcctcacagcatatcgtggaaaccgatctgcatgtacagggt
cctccacctaccattgtagaatggttgattttaccctgggttctgggcttcatctgggca
gagatcaaggagatgtgggatggaggtttcacagaatacgtccatgactggtggaacctg
atggatttcgccatgaactctctttatcttgccacaatttctcttaaaatggtggcttac
tttaagtacaacagctctcgtcctcgtgtggattgggaaatgtggcaccccactctcatt
gctgaggctctcttcgccatcgccaacatctttagctcactgcgtctcatctcactcttt
accgccaattctcacctgggccctctgcagatctctcttggccgaatgctgttggacatc
ctgaagttcctcttcatctactgtctggtgctgctggcctttgccaacggcctcaaccag
ctttacttctactatgagacgcaggcggtcgacgagcccaaccactgtaaagggatccgc
tgtgagagacagaacaatgccttctctacgttgtttgagacccttcagtctctcttctgg
tctgtgtttggcctcttgaatctgtatgtcaccaatgtcaaggcccgtcatgagttcaca
gagtttgtgggggccacaatgtttggcacgtataacgtcatctcgctggtggtgctattg
aacatgctcattgccatgatgaacaactcttaccaactcatcgctgatcatgcagacatt
gagtggaaatttgctcgcaccaagctgtggatgagctactttgatgaaggaggaacgtta
cctccacccttcaacatcgtacccagtccaaagtctgtttggtacctgtgtgtgtggctg
cactgccgtctgtgtggacatggagagtccagacaagaggacgagtgtaaacacgagaac
tttcgagaatttacggaaagacatgcagataacctccttcagaaccagcattaccaggag
gtgatcagaagcctggtgaagcgctacgttgcggccatgatccgcagtgccaaaacagat
gaaggtctgacggaggagaactttaaggaactgaagcaggacatctccagtttccgctac
gaggttcttgacctgctgggtaatcgtaaagcagcacaccgcacctactcccccaacagt
gaagacactcaacacgacgaaccagctgagcccgaggaacagagagaggagagcggtggc
gatgtaggaaacagatgtgggccttggggaaggtcctccagatccgaggcatctacctcc
ttcactcaatcctacagaggcggaggatctcacttcagcgtatctgccctcttcaagtcc
atggcgggtacggaaagacgagctagagccagacccgaaaccaacggcctggggaaagac
gtttcttcttcgtttgtccagaccagcaaccgtctgcatcggttttcacattccaagaaa
gtctcattgcaacgtttgggaacaatgatgtcacgtatgaacggacacttgcctgatccg
cagcagtccgcatatagcatctcagacagggtaccgcaagcggattggtgcggcccccgg
gcgctgtcggagttaacaaggagtgaactgcatctgcacacgctgggactgagatccaca
gagactgaacagaacctgatgcagtccacatctcaacaggcaaatggcatggacagccta
ttcctcgggcctcccggacactcgctgcaccgtgcttccggtctgaccgcctccagtgcc
cggctcctggcctccagtgatggcctgtgccagagctggatggatcactgtgacagtttt
ggttcttcgagctgggaacaagaggaatctgttaccacccagctgtag
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