Paramisgurnus dabryanus (large-scale loach): 135776926
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Entry
135776926 CDS
T10799
Symbol
setdb1a
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-A isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab00310
Lysine degradation
pdab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
135776926 (setdb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135776926 (setdb1a)
Enzymes [BR:
pdab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
135776926 (setdb1a)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
135776926 (setdb1a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
135776926 (setdb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Tudor_5
Pre-SET
Tudor_4
MBD
DUF5604
Tudor_3
Agenet
DUF7206
Motif
Other DBs
NCBI-GeneID:
135776926
NCBI-ProteinID:
XP_065143914
LinkDB
All DBs
Position
19:8734557..8753231
Genome browser
AA seq
1506 aa
AA seq
DB search
MNLNRMSSGANEENLMMMTKDDLQRWIQTEVNKNPQLVQRHEQLAQVEEWVKQKESDATH
TRILYSSACETQEIICACYGKMQVHTRSVASMALQSVLECESVMKGLYGMLGLDYRDVDS
EEEEGGGVKEPQDVIQIIDDEVGEEKSWRDDDDIVFVDMGATKETLEPMLEKVTVAIEKS
SRLVQDLVQMVTKTSSIRADSSSDIYTRPSSISTSEMRSACESLEPTDSSIAIVKTESLS
MATTAKMFSPEHPVSTHNSDFTAKIKTEPQSAPLMPEISSLHNCKDQKALFSHGGSSLAS
VKRESEMMSVTPPITIAGYNSDAGATVKTEPQLTPVISNISSLSSNSHPFSVKTEPQSKP
LFFEIPPVPSKLEKLETTMDHKSDSMVTLKSELLLTTLKTEQPKTIPDPSLDLHAIKTEP
QLAAVTPEPSSSPIVLEKPQSTPSCNSPSKTTEMSSELPPEPPKNSEQDNTISSNKSPPT
NKKAAKRKKSKSPEPSPSTKAKLKTSETASSVSHTSDSQKETARSASHAESSDDTEIYDT
EELDSHTQSDETPNPPPESSSNTAAKNTTSNQVTTPPPTTPPPVIKKPAASAKPSDSKRA
SSAPSSKSSEPTKTHAEIKLKVDMVALGKGKKNAWYRGTVVETQTPENDNKYKLEFKKGK
IYKIPPHHLACMNPPLLKDLFIGCRVVVSYKDAEDKTCFGAAVLAELPDRKNRMRFLVFY
DDGRVAYVALPDLHLVCKQLKKVWRDIDDETCSSQVKEYLRVYPNPIAVVLRVGQDTKAE
RDGKFQACTVDQLDGSLIQICFKGDKQKEWVYKGSDKLEHIVTIKKRLAQQKTQPANKTA
GNNTASSHVTRQTSVPNKTPSQSPQNATTAASATQKTQNTDATVTKTPSQSSPNDTPAVS
ATPQTNTTVTKPPTVSPKNVTPAVSSTHVKPQTVNKMTDAPSISPQNAKSAAFQPKVVLQ
KLAIPPAVSASKAAIQTIKSGTAVDDPNLRSAKRPSPDEDEDHVFEKDQPKFTNLYHRCC
PACLDGVRPKNVDMHHGQNPLQIPLLFKFRRMTARRRLDGKVFFHIFYRSPCGRSLCDMQ
EVQVYLFETQCDFLFLDMFCMDPFVLVNRARPPSTSTNQPNLYLPDISEGKEVLPLPCVN
EVDHTPAPSIRYTKDRSPAPGVSINTSLDFLTGCDCTDGCRDRTKCSCHQMTIEATSLCS
GGPVDVTAGYTYKRLQTTLPTGVYECNPLCRCNHRICSNRLVQHGLQLRLELFMTQHKGW
GIRCKDDVAKGTFVCVFTGKVMTEDKVNEDDMVSGNEYLANLDFIEGVEKLKEGYESEAY
CSDTENESNKKTITMKTGPLWKNTIFHEDSSSGEEKDEAMQLDTDKVKTDGQEASGPKRC
FAIKSFERRVKLLETSDARKEKTWKAQLANNTRRLFDGEETCYIIDARQEGNLGRFINHS
CSPNLFVQNVFVDTHDLRFPWVAFFASKRIKAGTELTWDYNYEVGSVEGKVLLCCCGSSR
CTGRLL
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaacagaatgagcagtggagcgaatgaggagaacctcatgatgatgacgaag
gacgacctccagcgctggatccaaacagaggtgaacaaaaaccctcagctggtgcagaga
cacgaacagctggcgcaggtggaggagtgggtcaagcagaaggaaagtgatgccacccac
acccgaatactgtacagcagtgcctgcgagactcaagaaattatttgtgcatgctatgga
aaaatgcaagtacacacaaggagtgtggcctcaatggcccttcaatcagtccttgagtgc
gagtcagtgatgaaaggtctttatgggatgctgggattggactaccgagatgtcgattcg
gaggaagaagaaggaggaggagtcaaagaaccacaggacgtcattcagatcatagacgat
gaggttggggaggaaaagagttggcgtgatgatgatgatattgtgttcgttgatatgggt
gctaccaaagaaactttggagcccatgctcgaaaaggtgacagtagccattgagaagtca
tccagactagttcaggatttagtccagatggtgaccaaaacatcttccataagagcagat
tcgtcatcggacatctacaccagaccttcatcgatctcaacctctgagatgaggtctgca
tgtgaaagcctggaaccaactgacagctccattgcaatagtaaagactgaatcattgtca
atggcaacaactgctaaaatgttcagtccagaacatcctgttagtacccataattcggat
ttcactgcaaaaatcaagactgaacctcaatcggcaccattaatgcctgagatatcttca
cttcacaactgcaaagatcaaaaagcacttttcagtcatggcggctcatccttagcatca
gttaagcgtgaatctgaaatgatgtccgtgactcctcccatcacaattgctggttataat
tcggatgccggagctacagttaaaactgaacctcaactcacaccggtcatttctaacatt
tcctcactttctagcaattcccacccattttcagttaaaaccgaacctcaatcgaagcca
ttgtttttcgaaattcctcccgttcctagcaagttggaaaaattggaaacgactatggat
cacaaatcggattccatggttacacttaagagtgaactactattgacaacattaaaaacc
gaacaacccaaaactattcccgatcctagcttggatttgcatgccattaaaactgaacct
caactggcagcagtaactcctgaaccgtcttcatcgccaatcgttttggagaaacctcaa
agtactccaagttgtaattcgccatcaaagactactgagatgtcctctgaactgccacct
gaaccaccaaagaactctgaacaagacaacactatttccagtaataaatcgccacctaca
aacaaaaaggcagccaaaaggaagaaatcgaaatcccccgagccatcaccaagtaccaag
gccaagctgaaaacttcagaaactgcgtcatccgtctcccacacttccgactctcaaaaa
gaaacggcaaggtcagcttcacatgcagagagtagtgatgacacagagatttatgacaca
gaggagcttgacagccatacacaaagtgatgaaacccctaacccacccccagagtcatca
agtaatacagctgctaaaaataccaccagcaatcaagtaaccaccccacctccaaccacc
ccacctccagttatcaaaaaacctgctgcttctgcgaaaccttcagattctaaacgagct
tccagtgcaccatccagcaagtcctcggagccaactaaaacacatgcagagatcaaatta
aaggtcgacatggttgcattggggaaggggaagaaaaatgcttggtatcggggaacagtg
gtagaaactcaaacaccagaaaatgacaacaagtacaagttggagtttaagaagggtaaa
atatacaagattcctcctcatcacctggcctgtatgaacccacccctgcttaaggatctg
ttcattggctgtcgggttgtggtcagctataaagatgctgaagacaagacgtgtttcggg
gccgccgtgcttgctgaacttccagatcgcaagaatcgcatgaggtttctggtgttttat
gatgatggacgggtagcttatgtggcattaccagaccttcatctcgtctgcaaacagttg
aaaaaggtttggagggacatagacgatgagacctgcagttcgcaggtgaaggagtatctg
cgtgtctatcctaacccaattgctgtggtgcttcgtgtgggccaagacacaaaggcggaa
cgtgatggcaagtttcaggcctgcacggttgaccagttggatggaagtctgatacagatt
tgctttaagggagacaaacaaaaagagtgggtttataaaggctcagacaagctggaacac
attgttactatcaaaaaacgtctggctcaacagaagacacaaccggcgaataaaacagca
ggaaacaacactgcttcatctcatgtaactcgacaaactagcgtgcccaacaaaacacca
tctcagagtcctcaaaatgccacgacggctgcgtctgccacacagaaaacacagaacacc
gatgccacagtcaccaaaacaccatctcaaagctctccaaacgacactccagctgtgtct
gcaacacctcaaactaataccacagttaccaaaccaccaactgttagccctaaaaatgtc
acaccagctgtttcttccacacatgtaaaaccacaaactgttaacaaaatgaccgatgca
ccatctataagccctcaaaatgccaaatcagctgcgttccagccaaaggttgttctgcag
aagttggccatcccgccagctgtaagtgcatcaaaggctgccatacaaaccatcaaatct
ggtacagcagtcgatgacccaaatttaagaagtgcaaaacgaccttcacctgatgaggac
gaagatcatgtatttgagaaagaccagcccaagttcacaaacttgtatcatcgctgttgt
ccggcatgcctggatggggtgagaccgaaaaatgttgacatgcaccatggtcaaaaccca
cttcaaattccactgctttttaaatttcgccgaatgactgcccggagacgtctggatgga
aaggtgttttttcacatcttctatcgctctccgtgtgggaggagcctgtgcgacatgcag
gaagtgcaagtgtacctgtttgaaacacagtgtgattttctcttcttggacatgttctgc
atggacccgtttgtccttgtaaaccgtgcccgacccccctccacgtcaaccaatcaacct
aacctgtatctgccggacatatcggagggcaaagaggttctcccgttgccctgtgttaat
gaggtggaccatacacccgctcctagcatcagatacaccaaagacagaagtccggctcca
ggtgtctccattaacacaagtttagatttcttaaccggatgtgactgcacggatggctgc
cgggacaggacaaagtgttcatgtcatcagatgaccattgaggctacatctctatgcagc
ggaggtcctgtagatgttactgctggatatacgtataagagactgcagacaaccctgccg
acaggggtgtacgagtgtaaccctctctgccgctgcaaccaccgaatctgcagtaacaga
cttgttcaacacggcctgcagctgcgactggagctcttcatgactcaacacaaaggctgg
ggcatccgctgcaaagacgacgtggccaaaggaacctttgtctgcgttttcactggtaaa
gtcatgacagaagataaagtgaatgaagatgacatggtgtctggtaacgagtatttggcc
aatcttgacttcattgagggggtggagaaactgaaggagggttatgaaagcgaggcgtac
tgctcggacacagagaacgaaagcaacaagaagacgataaccatgaaaacgggtccgttg
tggaaaaataccatctttcatgaggactctagcagtggggaagaaaaagatgaagctatg
cagctggacactgataaagtgaagacggatggacaagaagcttctggcccaaaacgttgc
tttgccataaagtcgttcgagagaagagtgaaacttctagaaacgtctgatgcacgaaaa
gagaaaacttggaaagcacaacttgccaacaacacccgcagactgttcgacggagaggaa
acgtgctacatcattgacgcgaggcaggagggcaaccttggacgcttcatcaatcatagc
tgcagtcccaatttgtttgttcagaatgtctttgttgacacccatgacctccggttcccc
tgggttgcgttttttgccagcaagcgtattaaagctggcacagagttgacatgggattat
aactatgaggtgggcagcgttgaagggaaggtcctgctttgctgttgtggttcatcacgg
tgcacaggaagactgctttga
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integrated database retrieval system
