Paramisgurnus dabryanus (large-scale loach): 135777975
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Entry
135777975 CDS
T10799
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04620
Toll-like receptor signaling pathway
pdab04621
NOD-like receptor signaling pathway
pdab04622
RIG-I-like receptor signaling pathway
pdab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135777975 (traf3)
04621 NOD-like receptor signaling pathway
135777975 (traf3)
04622 RIG-I-like receptor signaling pathway
135777975 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135777975 (traf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Rod_CreS
zf-C3HC4
zf-C3HC4_2
CCDC39
ATG16
Sina_ZnF
ATG17_like
zf-RING_UBOX
RING_XB3-XBAT31
YonD_C
NOCA1_mid
FlaC_arch
zf-C3HC4_4
DUF8567
DUF1664
CENP-K
Exonuc_VII_L
DUF4349
CCDC18_2nd
FapA
Med4
UPF0242
HAUS1
ODF2_C
CCDC192
AAA_13
PEA2_C
Fez1
CCDC18_1st
CC_Bre1
USP8_interact
zf-TRAF_2
IFT57
DASH_Dad3
Motif
Other DBs
NCBI-GeneID:
135777975
NCBI-ProteinID:
XP_065144377
LinkDB
All DBs
Position
17:31044683..31060141
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AA seq
599 aa
AA seq
DB search
MSGSIREILQRNGVGSSDDTVEQLIHVMSAGRNVEQQIALQQRPPSLGMPSMALRSRTEP
GFLPIHGGFRDRFVTTPEPKYCCESCRLVLCNPRQTECGHRFCESCIAELLSKSTPVCPA
DREPLFEDKIFRDVCCNREIMALKVYCRSEKNGCKEQMSLQQVMDHLEVCPYFEVPCPLG
KCKEKMMRKDMPEHLSRKCKHREITCEFCNHKMALTELQKHKETVCPAFPVACPNHCSFA
SILRSELSSHQNDCPKAQVTCSFIRYGCSYKGLNQEMREHESNFASEHLRMMAVRNTTLE
AKVEDVKSELMERYKVLPSLSSRLAEVETQYEEIREKLRQLEQKIASMQKLMSTHSEKLL
EVEMELRELRPLRALREEVEALRGSVESMRSIISSLDSGRVGSSSGPALGSFEQRLTRHD
DMLSVHDIRLAEMDLKLQVLETASFNGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGY
FGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDPLLPWPFKQKVTLMLMDQGPARKHLS
DAFKPDPNSSSFRRPTGEMNIASGCPLFVAQTVLENGTYIKDDTIYIKVNVDTSDLPDP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctccattcgtgaaattcttcaaagaaacggggttggatcatcggacgacacc
gttgaacaactgattcatgtcatgtccgcagggcgtaatgtggaacagcagattgcactg
cagcagcgtcctccatctctcggaatgccctccatggccctgcggtccaggaccgagccg
ggattcctgcccatacacggtggcttcagggatcgctttgtcacgacacccgagcccaaa
tactgctgcgagtcctgcaggctagtgctgtgcaaccctcggcaaactgagtgcggacat
cgcttctgcgagagctgcattgcggagttgctcagtaagtctaccccagtgtgtccagct
gatcgagaaccactctttgaagataagatattccgggatgtttgctgcaatagggaaatt
atggctttaaaggtctactgccgaagtgagaaaaatggatgtaaagaacagatgagttta
cagcaggtcatggatcacttggaagtttgtccttacttcgaggtgccatgtccattggga
aagtgcaaagagaagatgatgagaaaagacatgcccgagcatctgagccgtaaatgcaaa
caccgagagatcacctgtgaattctgcaatcacaagatggccctcacagagttacagaaa
cacaaagaaaccgtttgtccagcttttcctgtagcatgtcctaatcactgctcgtttgca
tccattttgagaagcgagctgtccagtcaccagaacgactgcccaaaggcccaggtcacc
tgctcattcattcgctatggatgctcctacaaggggctgaatcaggagatgagggaacac
gagtctaattttgcgtctgagcacctaagaatgatggcggtcaggaacaccacactggaa
gctaaggtagaggacgttaagagcgagctgatggagcgatataaagttctgcccagtctc
agcagtcgtctggcggaggttgaaacacagtacgaggagataagagaaaagctcagacag
ctggagcagaagatagccagcatgcagaaattgatgagcactcactcggagaaactgctc
gaggttgagatggagctgcgagagcttcgtccactgcgagctttaagggaggaggtggag
gctttgagaggctcagtggagagcatgcgttcaatcatatcttctctagactcgggtcgt
gttggatccagttctggtccggcgctggggtctttcgagcagcgactgacacgccacgac
gacatgttgagcgtccatgacatccgattggcagagatggacctgaagctccaggtgttg
gagacagccagtttcaacggtacgctcatctggaagatccgcgactacaaaaggcggaaa
caggaagcggtggcgtccaaaacgctgtcgctttacagccagcccttttacacgggatac
ttcgggtataagatgtgcgcccgcgtctatttaaacggggacggaatgggtaaaggcacg
catctctcccttttctttgtggtgatgcgcggggaatacgatcctttgctgccgtggccg
ttcaaacagaaagtgacgttgatgctgatggaccaagggccggcgagaaaacatttaagc
gatgcctttaagccggaccccaacagcagtagctttcgccgacccaccggcgaaatgaac
atcgcctcgggttgcccgctttttgtggctcaaaccgtcctggagaacgggacgtatatc
aaagacgacaccatctacatcaaggtgaacgtcgacacctccgacctgcctgatccgtga
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