Paramisgurnus dabryanus (large-scale loach): 135778719
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Entry
135778719 CDS
T10799
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04010
MAPK signaling pathway
pdab04120
Ubiquitin mediated proteolysis
pdab04140
Autophagy - animal
pdab04144
Endocytosis
pdab04620
Toll-like receptor signaling pathway
pdab04621
NOD-like receptor signaling pathway
pdab04622
RIG-I-like receptor signaling pathway
pdab05132
Salmonella infection
pdab05168
Herpes simplex virus 1 infection
Brite
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135778719 (traf6)
Membrane trafficking [BR:
pdab04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
135778719 (traf6)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135778719 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
135778719
NCBI-ProteinID:
XP_065145307
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MACSDTKKSSLGGACCDSDYSSCAAAMEKERESYLSPTENPSTISVSSCFQPDQQGYDVD
FDPPLESKYECPICLMGLRSAVQTPCGHRFCHLCIKKSLSDTGQKCPIDNEVLLEEQLFP
DNFANREILSLTVRCRNEGCNEKMELRQLEKHSPKCRFATEQCTQCFEFVRISLMDEHKT
QHCLQRLMTCPDCAGSFVFAGRQIHKQMCPFANTACEYCEMELIRDQLESHCATDCVKAP
VACTFSTFGCREKMPRNELAQHMQEFTQMHMRYMAEFLRNQTLNGPLAPSAFAHSSADER
GASSRPAEHCQCSQELRNLRETVSELEGRLVLQDQLIRELYIKNETQRTQLTESRLKLST
LEEATRELEAQQYQGVYVWRLENFSAHLRNQEAGQPVVLHSPPFYTGRPGYKLCLRLHLQ
TPSAPRCSNYISLFVHTMQGEFDSQLSWPFQGTIRLSVLDQVEGQHHVEVMETKPDLQAF
QRPTVQRNPKGFGYVTFLHLQALRQRGFVKEDVLLVRCEVTPRFDASLRREGVQPRGPEP
SL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcagtgacacaaagaagtccagcctgggtggtgcttgctgtgacagtgattac
agcagttgtgcagcagctatggagaaggagagagagtcgtatctcagcccgactgagaac
ccctcgactattagtgtctcttcttgtttccaaccagaccagcaaggctatgatgtagac
tttgaccctccactagaaagcaagtatgaatgtccaatctgtctgatgggcctcaggtca
gcagtgcagacaccatgtggacatcgattttgccatttgtgcatcaagaagtccctcagt
gacacggggcaaaaatgtccgattgacaatgaagtgctgctagaagaacagcttttccct
gataactttgccaatagagagatcctctcactcaccgttcgctgccgaaacgaagggtgc
aatgaaaaaatggagttgcggcaattggagaaacactcccctaagtgtaggtttgccaca
gagcagtgcactcagtgttttgaatttgttcgtataagccttatggatgagcataagacc
cagcactgcttacagcgcctcatgacctgccctgactgtgcagggagctttgtgtttgct
ggcagacagattcataaacagatgtgtccttttgctaatacagcgtgtgaatattgcgaa
atggagcttattcgggatcagttggaatcgcattgtgccacagactgtgtaaaggcacct
gtagcctgtaccttcagtacgtttggttgtcgtgaaaagatgccgagaaatgagctggcc
cagcacatgcaagaatttacacagatgcacatgcgttacatggctgagtttctgcgcaac
cagactcttaatggccctcttgcgccatcagcatttgcccattcctcagcagatgaacgt
ggtgcttcctctcggccagcagaacattgccagtgtagccaggagcttaggaacttaagg
gagactgtttcggagctggagggacgacttgttctccaagaccagctgatccgagagctg
tacattaagaatgagacccagagaacccagcttactgaatcacgtcttaagctgagcaca
ctggaagaggccacccgagagctggaagcccagcagtaccaaggtgtctacgtgtggcgg
ctcgaaaacttctcggcccacctgcggaaccaggaggccggtcaacctgtagttcttcac
agcccacctttctacacgggacggccgggctacaaactttgccttcggctgcacttgcaa
acccccagtgctccgcgctgttccaactatatctcgcttttcgtgcacactatgcagggt
gagtttgacagccagctctcttggcccttccagggcacgattcggctttccgtgttagat
caagtcgaagggcaacaccacgtggaagtaatggagaccaaaccggacctgcaggctttc
cagaggcccactgtgcagcgcaaccccaagggtttcggctatgtcacttttctgcatcta
caggcattgcgccagcgtgggttcgtgaaagaggatgtgctattggtgcgctgtgaggtc
acaccacgctttgacgctagcctcaggcgtgagggtgtccagcctcggggcccagaacct
tcactttga
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