Paramisgurnus dabryanus (large-scale loach): 135779814
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Entry
135779814 CDS
T10799
Symbol
tiam1a
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04530
Tight junction
pdab04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135779814 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
135779814 (tiam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
135779814 (tiam1a)
Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
135779814 (tiam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
PH_9
RBD
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
135779814
NCBI-ProteinID:
XP_065146802
LinkDB
All DBs
Position
10:13824239..13886730
Genome browser
AA seq
1626 aa
AA seq
DB search
MGNVESQNGDHTYYSEGQGHLSRKHMTRSLRIKHSRRSRHASSNKGEHRDSETSTRSSST
PSIPQSLTENGLEPFKKTDALKGYGGNIWVDRMAMNLRPVSFHDSTGDPTITPGSEDGVE
MDTVVPESCDETRLFVSKDTYLQRTKDGPREGSSFKKKRSKSADIWREDSMEFSCSDLSQ
EHLTSTEEIIERTEVEDKAFAKCGGRRRTSTPRTLESHPGERANSLDELCTERLPSLHGS
HHHYNGHGTERTKAGIMNGEVLSPEEEEGNGYSAYTLPCRRSHCLSEGLSNHKATLRSCM
QGRRAQTTHDITAGEGSEYGDSGIDGGLAEVEHSSRRCKAMSASFSVYSTASESIFAGSD
SGSSSGGGGDQRQSGGDQGVYENFRHELDLNSRQTRDCLEEASSAASDERSSGTLSSVYP
SDILLTTAHGTVRKAGILAVKNFLVHKKNKRVESAAKRKWKQYWVSLKGCTLFFYETDGR
SGIDHNSIHKHAVWVENSIVQAVPEHPKKDFVFCLSNALGDAFLFQTSGQTELENWITAI
HSACAAAVARQHHREDTVRLLRSEIKKLEQKIDMDEKMKKMGEMQLSAVTDAKKRKTILE
QIFLWDQNLEQFHMDQFRYRCYLSSLQGGELPNPKRLLAVASRPTKLSMGRLGIFSVSSF
HALVAARTDGGIRRRTQALSRSSSKRKSRFSSLWGLDTTSKKKTKGRPSINQVFVDGEEP
VQRNLDHMFEDTAKETLNDQDGSLSSIPQHKTDSDVWVPDYLTPSWVSLPDDRPVLAIIQ
PDETAMEVLEALCRTHGLDHSKYYLRLKVLIDNQVRLYVPKPEEDLCDLLYKEIEICAKT
TKVIQFDRDESCAIGYGFSVAVVEEDGRQQVHITDVKAGGLAFAKGLRAGDEIVKLNSKP
ASALELADMQAAFALPSLTLTVSTLPTADPHQLCLQPPRRSDGAQEHCTDIFSQSQEDIL
DDGVGLVLHSPTDTEEDRVNLTAESPADSPEDETDSHKSTDQMTTFCRNLHDMNSPEGPV
SCSSFSPTSSSSSSCVPSPISPSPVLFTPRQLSDADKLRKVISELVDTEKTYVKDLNFLI
ERYLNPLQKESFLSQDELDVLFGNLAEMVEFQVEFLKTLEDGTRLLPDLDKLERVDQFKK
VLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLSKAKTDPEFKAFLAERNPRQQHSSTLE
SYLIKPIQRVLKYPLLLRELYSLTDPESEEHYHLNVAMKAMNKVASHINEMQKIHEEYGA
VFDQLINEQSSDKKEVADLSMGDLLLHDTVVWINPPSALMKGKRDPELAAFIFRTAVVFV
YKDCSKHKKKMGGSHRASVLDERDPFRFRHMISTDALQVRNLPNSEGSAMCEIVHVRSES
EGRPERTFHICCSSPESKKDFLKTVHSILREKQRRELMKTDSLPPNQQYIPFGGKRLCAL
KGSRPIMNRAVSDPPRTLGRRKLIRNRFTIDTDVIFNDGSSQDLSPVTPTDSPPSKLSSL
LQKPQHPIGDTDRWVEDQFDLQIYENQDDVKETDILSDDDEYCKSVRGPSSEPSLEESLE
ALSVEGDVEKPDEILEDKPSPMSHAPLKLTLLKKQCAVESVASERDCEVIWVRRDDFGNG
CNSDIF
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgtggagagccaaaatggagaccacacctactacagtgaggggcagggccac
ctatcacgaaagcacatgacccgatcacttcgcatcaagcattctcgccgatcacgtcac
gcctcgtccaacaagggtgaacaccgcgactctgagaccagcacgagatccagcagcacc
ccttccatcccacaatcccttactgaaaacggccttgaaccatttaaaaaaacagatgct
ctgaagggctatggaggaaacatttgggtggaccggatggctatgaatttgcgaccggtt
tctttccacgacagcactggggatcccaccatcacgccaggctccgaggatggcgtagag
atggacacggtggtgccagaaagctgcgatgagaccagacttttcgtaagtaaggacacg
tacctacagagaaccaaagatggtcctcgggaaggaagtagctttaagaagaagcgatcc
aaatctgcagatatttggagagaggattcaatggagttctcatgttcagatctaagccaa
gagcatttgacgagcaccgaggagatcatcgagagaaccgaggttgaagataaagcattc
gctaaatgtggaggtagacggcgcacctccaccccacggacgcttgagtctcatcccgga
gagagagctaactctttggatgaactttgcacggagaggctaccttcacttcatggctcc
caccatcactataacggtcatggtaccgagaggaccaaagcgggcataatgaacggagag
gtcttgtctccggaagaggaggaaggtaatggatactcagcatacactcttccttgtcgt
cgctcccactgcctgtcagagggactgtccaatcacaaggctaccctccgttcatgtatg
cagggccgacgtgcacaaacgacacatgatatcacggcgggtgagggtagcgagtatgga
gacagcggtatcgacggaggactggctgaagtcgaacactcgtcgcgacgctgcaaggcc
atgtctgcgtctttctccgtgtactccactgctagcgagagcatcttcgcaggaagcgac
agcggtagcagcagcggaggtggaggagatcaacgacaatctggtggagatcaaggagtg
tacgagaacttccgtcatgaactggacttgaactccagacaaacgcgggattgcttagaa
gaagccagttcggctgctagcgatgaacggagcagtggaaccctcagctccgtttacccc
tcggacattttgctcaccacggcccacggcacggtgcggaaggctggcatactggccgtg
aaaaacttcctggtgcataagaagaataagagggtggagtcggcagcaaaaaggaagtgg
aaacagtactgggtgtcactcaaaggatgcactctgtttttctatgaaacggatggccgt
tcggggattgaccataacagcattcacaaacatgcggtctgggtggaaaacagcattgtg
caggctgtcccagaacatcccaaaaaagactttgtgttttgcttaagcaatgcactggga
gatgccttcctatttcagacttcaggtcaaacagagttggaaaactggataaccgccatc
cactcagcatgcgctgcagctgtcgcccgccagcatcaccgcgaggacaccgtacgactc
ctgcgctccgaaatcaaaaagttagagcagaagatcgacatggacgagaaaatgaagaag
atgggcgaaatgcaactctctgctgtcacagatgcaaagaagaggaagactattctggaa
cagatattcctctgggaccagaatttggagcagtttcatatggatcagttccggtatcgt
tgttacctatccagcctgcagggcggcgagcttccaaatccaaaacgcctgcttgcggtg
gcttcccgccccaccaagctgtccatgggtcgtctgggcattttttcagtatcatccttc
catgccctggtggcagcgagaacggatggtggaattcggagacgcactcaggctctgtct
cgcagctccagtaaacgaaagagccgtttctcctctctctggggtctggacactacctca
aaaaagaaaaccaaaggcagacccagcatcaaccaggtgtttgtagacggtgaagagccg
gttcagaggaatcttgatcacatgtttgaggacactgcaaaggagaccctgaacgaccaa
gacggttcattgtcaagcattccccaacacaagacagacagtgacgtttgggttccagac
tacctcaccccatcctgggtctctttacctgatgaccggcccgtgttggcaatcattcaa
ccggacgagactgccatggaggtgctggaagccttgtgcaggactcatgggctggatcat
tccaagtactatttgcggttaaaggtcctcattgacaatcaagtgcggttatatgtcccc
aaacctgaggaggacctgtgtgacctgctctacaaagaaattgaaatctgtgccaaaaca
accaaagtcatacagtttgatagagatgagtcctgtgccattggttatggtttctcagtg
gctgtggtggaggaggacggtaggcagcaggttcatatcactgacgtgaaagccgggggt
ctggcatttgccaaaggtctgcgagcgggtgatgagattgtaaagttgaacagtaaaccg
gcgagtgcgttggagttggcagatatgcaggcagcgttcgctttgccctctcttaccctt
actgtcagtacactgcctaccgctgatccacaccagctgtgcctgcagcctccccgccgt
tcagacggagcacaggaacactgcactgacatcttctctcaaagccaagaggacatcttg
gatgatggtgttggcttggtgctgcacagcccgactgacacagaggaagaccgggtaaat
ctaacagctgagagtcctgctgacagcccagaggacgaaaccgattcacacaagagtaca
gaccagatgaccactttttgccgtaacctccatgatatgaattctcctgagggaccggtt
tcctgctcttctttttcccccacatcttcctcatcttcgtcctgcgtgccaagtcccatc
tcaccctcccctgtgctctttactccccgccagctttctgatgcggataaactacgcaag
gtcatcagtgagctggtggatacggagaagacctatgttaaggacctgaactttttaata
gagcgatacctgaaccctcttcagaaggagagcttcctctcacaagatgagctggatgtg
ctttttgggaacttggcagagatggttgaatttcaagtggagtttctcaaaactctggaa
gatggcaccaggctgcttccggatttagataaactggagagagtggatcaattcaagaaa
gttctgttttctcttggcgggtccttcctgtactacgcagaccggtttaagatctacagt
gcgttttgtgccagccacacaaaagtccccaaggtgctttcaaaagctaaaaccgacccg
gagtttaaggcgttcctggctgagaggaaccccagacaacagcattcctccacgctggag
tcctacctgatcaaacccattcagagagtcttaaaatacccactgctgctccgagagctt
tactctctcactgaccccgaaagcgaggaacactaccacttgaatgttgccatgaaagca
atgaacaaagttgccagtcacatcaatgagatgcagaagattcacgaggagtatggggct
gtttttgaccaactcatcaatgaacagagctcggacaaaaaagaggtcgccgatctgtca
atgggggacctcctactgcacgacacggtggtctggataaacccaccgtctgctctgatg
aaagggaagagagacccggagctggctgcattcattttcagaacggcggtggtttttgtg
tataaggactgctccaagcacaagaaaaaaatgggtggatctcacagagcatcagtcctg
gatgagagagatccgttccgcttcagacacatgatctctaccgacgctctccaagttcgc
aacctcccaaattcagaaggatctgcaatgtgtgaaattgttcacgtgaggtcagaatct
gaaggaagaccagagaggactttccatatctgctgcagctctccagagagtaagaaagac
ttcctgaagaccgttcattccattttgagagagaaacaacgcagagagttaatgaagact
gatagtttacctccaaatcagcaatatattcccttcggaggaaagcggctttgtgcgcta
aaaggctcacgacccatcatgaaccgagcggtttcggacccacctcgaaccctcggccgc
cgtaagttgattcgaaaccgtttcaccatcgacacggatgtgattttcaacgacggctca
tcccaagacctatcgcccgtcaccccaacagactctccaccgtcaaagctgtcctctttg
ctccagaaaccccagcatccgatcggagacactgaccgctgggtggaggatcagttcgac
ctgcagatctacgaaaaccaggacgacgtgaaggagacggacatcctcagcgacgacgac
gaatactgcaaatctgtccggggcccttcatccgaaccgagccttgaggagtctttggag
gcccttagtgtggagggagacgtagaaaaaccggatgaaatcctggaggacaagccgtct
ccaatgtctcacgcccctctgaagctgacccttctaaaaaagcagtgcgcggtggagagc
gtcgcctccgagagggattgtgaggtcatttgggttcgcagagacgatttcggcaatggc
tgcaacagtgacatcttctga
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integrated database retrieval system
