Paramisgurnus dabryanus (large-scale loach): 135781380
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Entry
135781380 CDS
T10799
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135781380 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135781380 (tdg.2)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
135781380 (tdg.2)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
135781380 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
135781380
NCBI-ProteinID:
XP_065147881
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All DBs
Position
23:complement(12038146..12042810)
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AA seq
400 aa
AA seq
DB search
MEERQYSSLTAPMDYLQYWYQTNPQQYQPEQVPQYHQMVNAAQYTEEKVITNLSVHQDVY
LDHHQQQHQQPQPQQFPIQPPDPPMTPAKGKKRGRPLKGEGKEQTDAEESPKKAKRTLDR
FNGMSPEEVMTKKLPDIITHNLDMLIIGINPGLMSAYKGRHYPNPGNHFWKCLFLSGLTD
EQLNHMHDQTLPERFGIGFTNMVERTTPGSKDLSNKEIREGGHQLLEKLQKYRPLIAVFN
GKGIYEIFCKEIFGVKAKNLEFGLQPYKVPDTETVCYLMPSSSPRCAQFPRAQDKVHFYI
KLKELRDQLKGVHDHQEILETKYSFDLTLAKEDAKRMAIKEEQHDPGYDETCGHGSWEEQ
QQASNVNSHGTDQVTDNLWTMQPFTEQIPDIRCSSNNEKT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaggcagtattcatctctgacggcccctatggattatctacagtactggtat
caaacaaatcctcagcagtatcagcccgagcaggtgccacaataccaccagatggttaat
gctgcccagtatacagaagaaaaggtcataacaaatttatcagtacatcaagatgtatat
ctggatcatcatcaacaacaacatcaacaacctcaaccccaacaattccccatccagcca
cccgatcctccgatgacacctgccaaaggcaagaagcggggacgtccccttaaaggtgaa
ggaaaagagcagacagatgctgaggagtctccaaaaaaagcaaagaggacattggacaga
ttcaatggaatgtcaccagaggaagtcatgacgaaaaaactaccagacatcatcacccat
aaccttgatatgctaattattggcattaatccaggcctgatgtcagcctacaagggaagg
cattacccaaatcctgggaatcatttttggaagtgcttgtttctctctgggttgactgat
gaacagcttaaccacatgcatgatcagacgctccccgaaagattcggcattggtttcacc
aatatggtggaaaggaccacgcctggaagtaaagatctctcaaataaagagatccgtgaa
ggtggtcaccaacttttggagaagctccagaagtacaggcctttaattgcagtcttcaat
ggcaaaggtatttacgaaatattttgtaaggagatttttggagtaaaggccaagaactta
gaatttggattgcagccctacaaagttccagacacggagacggtttgttatctaatgccg
tcatcaagcccacgttgtgctcagttccctcgtgctcaggacaaggtgcacttctacatt
aaactgaaagaactcagggatcagctgaagggagtgcacgaccatcaagagatcctagag
acgaaatattcatttgatctgactttggccaaagaggatgccaaaagaatggcaatcaaa
gaagaacagcatgaccctgggtatgatgagacctgtggtcatggatcatgggaagaacaa
cagcaagcatccaatgtcaattctcatgggacagaccaggtaacggacaacctgtggaca
atgcagccgtttacagaacagattccagacatcagatgtagcagcaacaacgaaaaaacc
tga
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