Paramisgurnus dabryanus (large-scale loach): 135782584
Help
Entry
135782584 CDS
T10799
Symbol
cbsb
Name
(RefSeq) cystathionine beta-synthase b isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab00260
Glycine, serine and threonine metabolism
pdab00270
Cysteine and methionine metabolism
pdab00670
One carbon pool by folate
pdab01100
Metabolic pathways
pdab01230
Biosynthesis of amino acids
Module
pdab_M00035
Methionine degradation
pdab_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
135782584 (cbsb)
00270 Cysteine and methionine metabolism
135782584 (cbsb)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
135782584 (cbsb)
Enzymes [BR:
pdab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
135782584 (cbsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
OmcA-like_N
Motif
Other DBs
NCBI-GeneID:
135782584
NCBI-ProteinID:
XP_065149033
LinkDB
All DBs
Position
15:complement(28307341..28324396)
Genome browser
AA seq
611 aa
AA seq
DB search
MPSSSESAPVCPHAAKVLLKGENGESVVNRDGKLNCESVLNGKDGHNSSIKDSTQMTGHH
VKKVDEDHMESGTPERKWIRPDLPSRCTWKLGLPNTDSPHNHFKPTENPSILPNILSKIG
DTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGILKPGDTIIEP
TSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTSARFDSPESHVG
VAWRLKNEIANAHILDQYRNPSNPLAHYDTTAEEILQQCDGKIDMLVAGAGTGGTITGIA
RKLKEKCPNIKIVAVDPEGSILAEPEELNKTDKTQYEVEGIGYDFIPTVLDRSVVDSWYK
STDEESFAMSRMLIKDEGLLCGGSSGTAMAAAVHVAKELKEGQRCVVILPDSIRNYMSKF
LSDKWMCEKGFLREEDLFVNKPWWWNLTLQELRLSAPLTVLSSVSIKKTIQILKVKAFDQ
APVVDEAGQILGMVTLGNMLSSVLAGKVSPSDPISRVLYKQFKQVRLTDNLGKLSRILET
DHFALVVHEQIQLDAVSSLNCSTCVADMGDGSSTMRQMVFGVVTAIDLLNFVAIRERRER
SMSECSLSEDQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccatctagttcggagtccgcacctgtttgcccacatgctgccaaggtcctcctgaag
ggtgagaatggagaatctgtggttaatagagatggcaagctgaactgtgaatctgtctta
aatggcaaggatgggcataattctagtatcaaagattcaacccaaatgactggtcatcat
gtaaagaaagtggatgaagatcatatggagagtggaactcctgagaggaaatggattcgc
ccagatttgcccagtagatgcacctggaaactcggcctccccaatacagattcgccccac
aaccacttcaaaccgactgaaaaccccagtatcctccccaacattttaagtaaaattgga
gacacccctctggtccgcatgaacaagattcccaaagcgttcggccttaagtgtgagctc
ttggctaaatgtgagttcttcaatgccggtggaagtgtaaaggaccgaatcagtctgcgt
atgatagaggatgctgagcgtgatgggattctgaaacctggagacaccatcatagagccc
acatcaggaaacacaggtattggtcttgccctggccgcagcagtcaaaggttatcgttgc
atcattgtcatgcccgagaaaatgagtatggaaaaggtggacgtccttcgtgctcttggt
gccgagattgttcgaacccctacctcagctcgctttgattcccccgagtctcatgtgggt
gtggcttggcgtttgaagaatgagattgcaaacgctcacattctggaccagtatcgcaat
cccagtaaccctctggctcactatgacacaactgcagaggagattctgcagcagtgcgac
ggtaaaattgacatgctggtggctggagctggcactggtggcaccatcactggcattgcc
cgcaagctgaaggagaaatgccctaatatcaagattgttgccgttgatcctgaaggctca
atcctagctgaaccagaagaactgaataagactgataaaactcaatatgaggtggaaggc
attggatatgacttcatccccactgttctggacagatctgttgtcgatagctggtacaaa
tctaccgacgaagagtctttcgccatgtctcgtatgctcatcaaagatgaaggtctcttg
tgtggtgggagttcaggcacagccatggctgcggctgtgcatgtggctaaagagctgaag
gaaggccagcgctgtgtggtgatcctccccgactccattcgcaactacatgtctaaattt
ctaagtgacaaatggatgtgtgaaaagggcttcctgagagaggaggatctttttgtcaac
aagccatggtggtggaacctgacacttcaggaattgcgactctccgccccactaactgtg
ctttcgtcagtgtctattaagaagaccattcagatcctgaaagtaaaggcttttgaccaa
gcccctgtcgtggatgaagccgggcagattctgggtatggtcacattggggaacatgctc
tcttctgttctggctggtaaggtcagcccatctgatcctatcagtagagtcctctacaaa
caatttaaacaggtgcgcctaactgataacctgggcaaactctctcgcattcttgagacg
gatcatttcgctcttgttgttcatgaacagattcagttggatgctgtcagcagtctgaat
tgcagtacctgtgttgcagacatgggcgatggatcctccacgatgaggcagatggtgttt
ggggtcgtcacagccattgatctgctaaactttgtggctattcgtgagaggagagaaaga
tcgatgtctgaatgttccctgtcagaagaccagtga
DBGET
integrated database retrieval system
