Paramisgurnus dabryanus (large-scale loach): 135785944
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Entry
135785944 CDS
T10799
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135785944 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135785944 (kdm2aa)
04121 Ubiquitin system [BR:
pdab04121
]
135785944 (kdm2aa)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135785944 (kdm2aa)
Enzymes [BR:
pdab01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
135785944 (kdm2aa)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
135785944 (kdm2aa)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135785944 (kdm2aa)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
135785944 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
135785944 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
F-box
JHD
LRR_6
Cupin_8
PHD
LRR_FBXL15
LRR_4
LRR_Zer-1
Rubredoxin
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
135785944
NCBI-ProteinID:
XP_073670366
LinkDB
All DBs
Position
4:complement(16111562..16130898)
Genome browser
AA seq
1316 aa
AA seq
DB search
MENEQEILTLVDGGVLLMRRRGRKRKISDEDVTLKRAGTRRRYQDDAISDDEIDGKRTFD
LEEKLHSSRFSSDRVKRMEGKDFTFEYVQRGGLRDPIIFERPDGLGIKMPDPDFSVNDVK
TFVGSRRLIDVMDVATQKGTEMSMAQWCRYYETPASQRDKTYNVISLEFSHTKLESLVKR
PATVEMIDWVDNMWPRHLKERQRDSTNSIMDMQYPKVQKYCLMSVQGCFTDFHVDFGGTS
VWYHILNGSKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDRATDCQRIELKQGYTFIIP
SGWIHAVYTPVDTLVFGGNFLHSFNVPMQLNIASIEDRTRVPSKFRCPFFFEMAWYVLER
YLYSLTNTSYLIPEYQKYSLGIGIKQESEVINGHTKEEQDESNSPTSGPGVKVHLTPFEL
EGLWNLVGKLEALPAHKKYVPSGIHNAAALLHDIRALLKEHANDSPKLSYTGKPIVRWPK
RPSWYQPPPPPPPVIRPKLATTPIVPRPVKPSSNMSVLRRRRVRCKRCEACMRTECGDCN
FCRDMKKFGGPGKLKQTCVLRQCLAPGLPLSAVCEICGEGSLDVGEELMECSNCAQIAHP
SCLKVSGDGVINKDLPSCWECPKCVLGKDTESESSGSGDDITAQDGSGGLRGGAWHRVGR
PPSSLSHGSLQKQAAAPEQRLRKRINIEGAKTHKRKSSSLDPRVAKIYRRHGMEHDDDSG
SDDEDGDGGRKMSIHSRGGVSSSRRGYGSGRRGVWRGSTHRGNRGGGSLTSSLKMRRGLG
ARGERGGRVRLRGGSHMRRRRYETDDDDDDEDDDDDDDDDEDEEDDDEDDSEEERHLGRS
DKEHRSRRRRRRGEDYDDDDEEDEDDDSEEQDFDGDDDEMEDMDDGGDDDDDDGENQSDS
DTDPPVLLVSDLNDDLLNDSYLTVTLQRPPKAKRDPGSIVPKLEAAMSPRTPNAPGFIQR
KTLPRARLRNSNLTPTGNGLAQSKGANASSRHHTRRNSNQDGRERDTLSPSSVSSRSSVS
PPPPPPSITTSSPPSLLSHPSFRDVGNERGCEKDIWVSVFRYLSRTDLAVCMRVCKAWYK
WCCDKRLWTRIDLSRCRSLSPQAISAIIKRQPVTLDLSWTPVSKKQIAWLIHHLPGLKDL
VMSGCSSLCVSALSSQSCPGLRTLDLCWAVAVKDTQIKDLIVQPGSESRSRLRGLLNLRL
SGLDISDSTLKLIVRHMPSLRRLDLSHCQGLTDQSVNLITASGCNTRNTLRQLNLAGCNK
LTDACLSYMKRLSALRLLDLRGCKNVTRRGCENFISDLSYCTLFCLTEDKLIQKIS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaacaggaaatcttaacgctcgttgacggtggcgtgttgttgatgagacgg
agagggaggaaaaggaagatcagtgatgaagatgtgacactgaagcgggctggcactcgg
cgacgttaccaggacgatgccatttccgacgatgagatcgatggaaagaggacgttcgat
ctggaggagaagctgcatagcagccgcttcagctcagatcgggtcaaacgaatggagggc
aaagatttcacatttgagtacgtccagagaggggggctaagggaccccatcatctttgag
agacccgatggacttggcattaaaatgccagatccagatttcagtgtgaatgatgtgaag
acgtttgtaggaagtcgacgcctgattgatgtaatggatgtggctactcagaaggggacg
gagatgtcaatggcccagtggtgtcggtactatgagactccggcttcccagagagacaag
acttacaatgttatcagtcttgaatttagccacactaaactagagagccttgtcaaaaga
cctgcaacggtggaaatgattgactgggtggacaacatgtggccacggcatttaaaggaa
aggcaaagagattccacaaattctatcatggacatgcagtaccccaaagtgcaaaagtac
tgcctaatgagtgttcagggctgtttcacagatttccacgtagactttggcggcacatct
gtgtggtaccacatactgaacggaagcaaggtgttttggttaattccacccacaccacaa
aacctggagctgtatgaaaactgggtgttgtcagggaaacaaggagacatctttcttggt
gacagggccactgactgccagaggattgagctcaagcagggatacacattcattatacca
tcgggttggatccatgcggtttatacacctgtggacacacttgtgtttggtggaaatttc
ctgcatagttttaacgtccccatgcaactgaatattgcaagcattgaggacaggacacgg
gtgccatcgaagtttcgttgtcctttctttttcgagatggcctggtacgtgttggagcgt
tatctgtacagtctgaccaacacctcctacctcatccctgaataccagaaatactctctg
ggcatcggaattaaacaggaaagtgaggtaattaatggccatactaaagaggagcaagat
gagagcaattctcctaccagtggaccaggggtgaaggttcacctgactcctttcgaactg
gaggggctttggaacctggtgggaaagctggaggctctgcctgcacataagaaatatgtg
ccttctggaatacacaacgccgccgccttgctgcacgacatacgggcgcttttaaaagaa
catgcaaacgactcccccaaactctcctacactggaaaacctattgtcagatggccaaag
agaccctcatggtatcagccccctcctccccctccacctgttatccgtccaaagctggcg
accacacccatcgttccccggccagtgaaaccatcctccaacatgtcggtgctgcggcga
cgacgcgtgcgctgtaaacgctgcgaggcctgtatgcgcacagagtgtggcgactgcaac
ttctgcagagacatgaagaaatttggtggccctggcaagctcaaacagacctgtgtcctc
cgccagtgtctcgctcctggtctgccgctctctgccgtatgtgagatctgtggggaagga
agccttgatgttggtgaggagctcatggagtgttccaactgtgctcagattgcccatcct
agctgtttaaaggtatcgggagatggagtgataaacaaagatctacccagctgctgggag
tgtcccaaatgtgtcttgggcaaagacacagaatctgagtcgtcaggcagcggtgatgac
atcacggcacaggatgggtcaggggggctcaggggcggggcgtggcacagggtcgggcgg
cccccctcttcactctcccacgggtcgctccagaaacaggcagcggcccctgagcagcgg
ctcaggaagaggataaatatagaaggagcgaaaacacataaacgcaaatcctcatctcta
gatcctcgtgtggctaagatctaccggcgtcatggaatggaacatgacgacgattctggc
agcgacgatgaggatggagatggtgggaggaagatgtcaatccactcaaggggaggtgtg
tcttcatcccgcagaggttacggatctggcaggcgaggagtttggaggggctccacacat
cgagggaatcgaggaggaggcagcttgacaagttcgctgaaaatgaggcgaggacttggg
gcaagaggagagagaggaggccgggttagattaagaggaggatctcatatgaggcggcga
cgctatgaaacggacgacgatgatgacgacgaagatgatgacgacgatgatgatgacgat
gaagatgaggaagacgatgatgaggatgatagtgaagaagagaggcatctgggccgatca
gacaaggaacatcgttcgcggaggagacgacgtagaggtgaggactacgatgatgatgac
gaggaggacgaagatgacgatagcgaggaacaggactttgatggagatgatgatgagatg
gaagatatggatgatggaggggatgacgatgatgatgatggagaaaaccagtcagattca
gacactgatccacctgtcctactcgtctccgatttgaatgatgacctgctgaacgattcc
tacctaactgtgactcttcagcgtcctcccaaagccaaacgtgaccccggctccattgta
ccaaaactggaggctgctatgtctccccgcacacccaacgctcctggtttcatccagcgc
aaaacattacccagggcgcgactcaggaacagcaatctgacaccgactggtaatggactt
gctcagtctaaaggtgccaatgcgtccagccgtcaccacacaagacggaactccaaccaa
gacggacgagagagagacactttgtcaccttcctccgtgtcttctcgctcttctgtttct
ccaccacctccgcctccttccattaccaccagctctcctccatccctcctctctcatccc
tcattccgtgatgtagggaacgagcgaggctgtgaaaaggacatttgggtgtccgtattc
cgttacttaagtcggactgacttggctgtgtgtatgagagtctgcaaggcttggtacaaa
tggtgctgtgataagcgcttgtggacacggatagatctgagccgttgtcggtcactaagc
ccccaggctatttcagccatcattaaacgacaacctgtgacactggacctctcttggaca
cctgtgtcaaagaaacaaatcgcctggctcatccatcacctaccaggtctgaaagatctt
gtgatgtcaggttgctcttcgttatgcgtgtcagctttgagttcacaaagttgcccgggt
ttgcgaacactagacctttgttgggctgtcgccgtcaaagatacacaaattaaagactta
atagtccagccaggcagtgaaagtcgcagtcggctaagaggtttgctgaatttacgtttg
tctggcttggatataagtgactccactctgaagctgattgtcagacacatgccttcgctg
aggcggttggatttgtctcactgccaggggctcaccgatcaatccgtcaacctgatcacc
gcttctgggtgcaacacccgaaacacgctcagacaacttaatcttgcaggttgtaataag
ttgacagatgcttgtctgtcctatatgaagcgattatcagcactcagactgttggatctt
cgaggatgtaagaatgtgactcgacgtggttgtgaaaactttatatctgatctctcttac
tgcaccctcttctgcctaaccgaagacaaactcattcagaaaatatcataa
DBGET
integrated database retrieval system
