Paramisgurnus dabryanus (large-scale loach): 135785944
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Entry
135785944 CDS
T10799
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135785944 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135785944 (kdm2aa)
04121 Ubiquitin system [BR:
pdab04121
]
135785944 (kdm2aa)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135785944 (kdm2aa)
Enzymes [BR:
pdab01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
135785944 (kdm2aa)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
135785944 (kdm2aa)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135785944 (kdm2aa)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
135785944 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
135785944 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
F-box
JHD
LRR_6
Cupin_8
PHD
DUF7885
LRR_4
LRR_Zer-1
Rubredoxin
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
135785944
NCBI-ProteinID:
XP_073670366
LinkDB
All DBs
Position
4:complement(16111562..16130898)
Genome browser
AA seq
1316 aa
AA seq
DB search
MENEQEILTLVDGGVLLMRRRGRKRKISDEDVTLKRAGTRRRYQDDAISDDEIDGKRTFD
LEEKLHSSRFSSDRVKRMEGKDFTFEYVQRGGLRDPIIFERPDGLGIKMPDPDFSVNDVK
TFVGSRRLIDVMDVATQKGTEMSMAQWCRYYETPASQRDKTYNVISLEFSHTKLESLVKR
PATVEMIDWVDNMWPRHLKERQRDSTNSIMDMQYPKVQKYCLMSVQGCFTDFHVDFGGTS
VWYHILNGSKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDRATDCQRIELKQGYTFIIP
SGWIHAVYTPVDTLVFGGNFLHSFNVPMQLNIASIEDRTRVPSKFRCPFFFEMAWYVLER
YLYSLTNTSYLIPEYQKYSLGIGIKQESEVINGHTKEEQDESNSPTSGPGVKVHLTPFEL
EGLWNLVGKLEALPAHKKYVPSGIHNAAALLHDIRALLKEHANDSPKLSYTGKPIVRWPK
RPSWYQPPPPPPPVIRPKLATTPIVPRPVKPSSNMSVLRRRRVRCKRCEACMRTECGDCN
FCRDMKKFGGPGKLKQTCVLRQCLAPGLPLSAVCEICGEGSLDVGEELMECSNCAQIAHP
SCLKVSGDGVINKDLPSCWECPKCVLGKDTESESSGSGDDITAQDGSGGLRGGAWHRVGR
PPSSLSHGSLQKQAAAPEQRLRKRINIEGAKTHKRKSSSLDPRVAKIYRRHGMEHDDDSG
SDDEDGDGGRKMSIHSRGGVSSSRRGYGSGRRGVWRGSTHRGNRGGGSLTSSLKMRRGLG
ARGERGGRVRLRGGSHMRRRRYETDDDDDDEDDDDDDDDDEDEEDDDEDDSEEERHLGRS
DKEHRSRRRRRRGEDYDDDDEEDEDDDSEEQDFDGDDDEMEDMDDGGDDDDDDGENQSDS
DTDPPVLLVSDLNDDLLNDSYLTVTLQRPPKAKRDPGSIVPKLEAAMSPRTPNAPGFIQR
KTLPRARLRNSNLTPTGNGLAQSKGANASSRHHTRRNSNQDGRERDTLSPSSVSSRSSVS
PPPPPPSITTSSPPSLLSHPSFRDVGNERGCEKDIWVSVFRYLSRTDLAVCMRVCKAWYK
WCCDKRLWTRIDLSRCRSLSPQAISAIIKRQPVTLDLSWTPVSKKQIAWLIHHLPGLKDL
VMSGCSSLCVSALSSQSCPGLRTLDLCWAVAVKDTQIKDLIVQPGSESRSRLRGLLNLRL
SGLDISDSTLKLIVRHMPSLRRLDLSHCQGLTDQSVNLITASGCNTRNTLRQLNLAGCNK
LTDACLSYMKRLSALRLLDLRGCKNVTRRGCENFISDLSYCTLFCLTEDKLIQKIS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaacaggaaatcttaacgctcgttgacggtggcgtgttgttgatgagacgg
agagggaggaaaaggaagatcagtgatgaagatgtgacactgaagcgggctggcactcgg
cgacgttaccaggacgatgccatttccgacgatgagatcgatggaaagaggacgttcgat
ctggaggagaagctgcatagcagccgcttcagctcagatcgggtcaaacgaatggagggc
aaagatttcacatttgagtacgtccagagaggggggctaagggaccccatcatctttgag
agacccgatggacttggcattaaaatgccagatccagatttcagtgtgaatgatgtgaag
acgtttgtaggaagtcgacgcctgattgatgtaatggatgtggctactcagaaggggacg
gagatgtcaatggcccagtggtgtcggtactatgagactccggcttcccagagagacaag
acttacaatgttatcagtcttgaatttagccacactaaactagagagccttgtcaaaaga
cctgcaacggtggaaatgattgactgggtggacaacatgtggccacggcatttaaaggaa
aggcaaagagattccacaaattctatcatggacatgcagtaccccaaagtgcaaaagtac
tgcctaatgagtgttcagggctgtttcacagatttccacgtagactttggcggcacatct
gtgtggtaccacatactgaacggaagcaaggtgttttggttaattccacccacaccacaa
aacctggagctgtatgaaaactgggtgttgtcagggaaacaaggagacatctttcttggt
gacagggccactgactgccagaggattgagctcaagcagggatacacattcattatacca
tcgggttggatccatgcggtttatacacctgtggacacacttgtgtttggtggaaatttc
ctgcatagttttaacgtccccatgcaactgaatattgcaagcattgaggacaggacacgg
gtgccatcgaagtttcgttgtcctttctttttcgagatggcctggtacgtgttggagcgt
tatctgtacagtctgaccaacacctcctacctcatccctgaataccagaaatactctctg
ggcatcggaattaaacaggaaagtgaggtaattaatggccatactaaagaggagcaagat
gagagcaattctcctaccagtggaccaggggtgaaggttcacctgactcctttcgaactg
gaggggctttggaacctggtgggaaagctggaggctctgcctgcacataagaaatatgtg
ccttctggaatacacaacgccgccgccttgctgcacgacatacgggcgcttttaaaagaa
catgcaaacgactcccccaaactctcctacactggaaaacctattgtcagatggccaaag
agaccctcatggtatcagccccctcctccccctccacctgttatccgtccaaagctggcg
accacacccatcgttccccggccagtgaaaccatcctccaacatgtcggtgctgcggcga
cgacgcgtgcgctgtaaacgctgcgaggcctgtatgcgcacagagtgtggcgactgcaac
ttctgcagagacatgaagaaatttggtggccctggcaagctcaaacagacctgtgtcctc
cgccagtgtctcgctcctggtctgccgctctctgccgtatgtgagatctgtggggaagga
agccttgatgttggtgaggagctcatggagtgttccaactgtgctcagattgcccatcct
agctgtttaaaggtatcgggagatggagtgataaacaaagatctacccagctgctgggag
tgtcccaaatgtgtcttgggcaaagacacagaatctgagtcgtcaggcagcggtgatgac
atcacggcacaggatgggtcaggggggctcaggggcggggcgtggcacagggtcgggcgg
cccccctcttcactctcccacgggtcgctccagaaacaggcagcggcccctgagcagcgg
ctcaggaagaggataaatatagaaggagcgaaaacacataaacgcaaatcctcatctcta
gatcctcgtgtggctaagatctaccggcgtcatggaatggaacatgacgacgattctggc
agcgacgatgaggatggagatggtgggaggaagatgtcaatccactcaaggggaggtgtg
tcttcatcccgcagaggttacggatctggcaggcgaggagtttggaggggctccacacat
cgagggaatcgaggaggaggcagcttgacaagttcgctgaaaatgaggcgaggacttggg
gcaagaggagagagaggaggccgggttagattaagaggaggatctcatatgaggcggcga
cgctatgaaacggacgacgatgatgacgacgaagatgatgacgacgatgatgatgacgat
gaagatgaggaagacgatgatgaggatgatagtgaagaagagaggcatctgggccgatca
gacaaggaacatcgttcgcggaggagacgacgtagaggtgaggactacgatgatgatgac
gaggaggacgaagatgacgatagcgaggaacaggactttgatggagatgatgatgagatg
gaagatatggatgatggaggggatgacgatgatgatgatggagaaaaccagtcagattca
gacactgatccacctgtcctactcgtctccgatttgaatgatgacctgctgaacgattcc
tacctaactgtgactcttcagcgtcctcccaaagccaaacgtgaccccggctccattgta
ccaaaactggaggctgctatgtctccccgcacacccaacgctcctggtttcatccagcgc
aaaacattacccagggcgcgactcaggaacagcaatctgacaccgactggtaatggactt
gctcagtctaaaggtgccaatgcgtccagccgtcaccacacaagacggaactccaaccaa
gacggacgagagagagacactttgtcaccttcctccgtgtcttctcgctcttctgtttct
ccaccacctccgcctccttccattaccaccagctctcctccatccctcctctctcatccc
tcattccgtgatgtagggaacgagcgaggctgtgaaaaggacatttgggtgtccgtattc
cgttacttaagtcggactgacttggctgtgtgtatgagagtctgcaaggcttggtacaaa
tggtgctgtgataagcgcttgtggacacggatagatctgagccgttgtcggtcactaagc
ccccaggctatttcagccatcattaaacgacaacctgtgacactggacctctcttggaca
cctgtgtcaaagaaacaaatcgcctggctcatccatcacctaccaggtctgaaagatctt
gtgatgtcaggttgctcttcgttatgcgtgtcagctttgagttcacaaagttgcccgggt
ttgcgaacactagacctttgttgggctgtcgccgtcaaagatacacaaattaaagactta
atagtccagccaggcagtgaaagtcgcagtcggctaagaggtttgctgaatttacgtttg
tctggcttggatataagtgactccactctgaagctgattgtcagacacatgccttcgctg
aggcggttggatttgtctcactgccaggggctcaccgatcaatccgtcaacctgatcacc
gcttctgggtgcaacacccgaaacacgctcagacaacttaatcttgcaggttgtaataag
ttgacagatgcttgtctgtcctatatgaagcgattatcagcactcagactgttggatctt
cgaggatgtaagaatgtgactcgacgtggttgtgaaaactttatatctgatctctcttac
tgcaccctcttctgcctaaccgaagacaaactcattcagaaaatatcataa
DBGET
integrated database retrieval system
