Paramisgurnus dabryanus (large-scale loach): 135786928
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Entry
135786928 CDS
T10799
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04060
Cytokine-cytokine receptor interaction
pdab04672
Intestinal immune network for IgA production
pdab04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
135786928 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135786928 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
135786928 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pdab04052
]
135786928 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
pdab00536
]
135786928 (cxcl12a)
Cytokines and neuropeptides [BR:
pdab04052
]
Cytokines
Chemokines
135786928 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
pdab00536
]
Heparan sulfate / Heparin
Chemokines
135786928 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
135786928
NCBI-ProteinID:
XP_065152620
LinkDB
All DBs
Position
20:complement(14040536..14050018)
Genome browser
AA seq
125 aa
AA seq
DB search
MKAQLSCWMSQLLLDSTQCGSLLHTAKMDMKVIVVLALMAVVINAPVSNAKPISLVERCW
CRSTVNTVPQRSIRELKFLHTPNCPFQVIAKLKNNKEVCINPETKWLQQYLKNALNKMKK
SQQQI
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgcagttgtcctgctggatgtcacagttgctcctggattctacacagtgcgga
tctcttcttcacactgctaagatggatatgaaagtgatcgtagtattggctttgatggcc
gtcgtcattaatgcccccgtttcaaatgccaagcccatcagcctggttgagaggtgctgg
tgccgctccacagtcaacacagtccctcagagaagcattcgcgagctcaagttcctccac
acacccaattgccccttccaagtcattgccaaactgaagaacaacaaggaagtgtgcatc
aacccagagaccaaatggctgcagcagtaccttaaaaacgccctgaacaaaatgaaaaaa
tcccaacaacagatctaa
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