Paramisgurnus dabryanus (large-scale loach): 135787231
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Entry
135787231 CDS
T10799
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135787231 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135787231 (c9orf72)
Membrane trafficking [BR:
pdab04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
135787231 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
135787231
NCBI-ProteinID:
XP_065153125
LinkDB
All DBs
Position
20:21966125..21975906
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AA seq
462 aa
AA seq
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MSAGCPPQSPAVAKTEVLVDDWCPMLAATFAYWDNILGPRVRHIWAPRGQGLSLLSDGEV
TFLANHTLNGEILRSAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGHSIISVLSSEIVPIMELLTSMKKHSVPEEV
DIKGTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSVVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCHSDGLFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHMYHQRRYMRAELSALWRAASENDISPDNLINAQDTYTPDLNVFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDETQKGKKPFKSLRNLKTDLDL
MVEGDLNIIMAMAEKLRAGLHSFVFGKSFLTSVQDRDLHMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaggctgccctccacaatctccagctgtggctaagactgaagtgctggttgat
gactggtgtcccatgctggctgcgacgtttgcctactgggacaacatcctgggaccccgt
gtgcggcacatctgggcccccagaggtcaggggttgtcgctgcttagtgacggagaggtg
acatttctggccaatcacacgcttaatggcgagattttgcggagcgctgagagtggtgcg
gtggatgtcaagttcttcgttctggcagaaaagggagtcatcattgtgtcgctgatcttt
gatggggaactcaaaggggataagaacacttgcgctctgtcaatcattttgccgcagtca
gagctgagcttctacctgcctctacacagcgtgtgtgtggaaagactcaaacacatcatc
cgcaagggacgcatctgcatgcagaagggtcacagcattatctctgtgttgtcatctgag
attgttcctataatggaacttctcacgtctatgaagaaacacagcgtacctgaggaggtg
gatataaagggcactgtgctcaatgacgatgatattggagacagctgtcatgaagacttt
ttgcacaaggctatcagctctcatcttcagacctgtggctgttctgtggtggttggtagc
aatcctgagaaagtcaataagattgtgctcacgctgtgtctgttcctcacccctgcggag
agaaagtgctctcgattgtgtcactcggacggtttgttcaaatatgacactggcctgttt
gttcagggtctcctcaaggactccacagggagttttgtgttgccctaccggcaggtgctg
tactctccctatccaaccacccacattgatgtggacattaacacggtgaagcagatgccc
ccctgccacgagcacatgtaccatcaacggcgctacatgcgtgctgagctcagtgccctc
tggagggctgccagtgagaatgacatcagtccagacaacctcatcaacgcccaggacacc
tacaccccagacctgaatgtgtttcaggacgtgatgcataaagacactcttgtgaagtcc
ttcatagatgaggtgtttctattgaaaccaggtctgtctctgaggagtgtgtacttgtcc
cacttccttcttctgctacacaggaaggccctgacacttctcagatacattgaagatgag
acgcagaaggggaagaaaccctttaaatctctacgcaatctaaaaactgatttggacctg
atggtggagggagacttgaacatcatcatggcgatggcggagaagctgcgggcaggcctt
cactcctttgtttttgggaagtcttttcttaccagcgtgcaggatcgtgatctccacatg
agcttctga
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