KEGG   Paramisgurnus dabryanus (large-scale loach): 135787424
Entry
135787424         CDS       T10799                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135787424 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdab03041]
    135787424 (smndc1)
Spliceosome [BR:pdab03041]
 Complex A
  U2 snRNP components
   U2 related factors
    135787424 (smndc1)
 Complex B
    135787424 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    135787424 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 DUF2730 PUA_4
Other DBs
NCBI-GeneID: 135787424
NCBI-ProteinID: XP_065153440
LinkDB
Position
17:complement(10957733..10961399)
AA seq 237 aa
MSEELVKQLSNYKAQLQQVEAALSTDPENEDLLKLQKDLQEVIELTKDLLTSQPAEGVAS
TNSSEAAAPTRSWRVGDSCMAVWNQDGQLYEAEIEEIDNENGTAAITFSGYGNAEVVPLQ
ALRVSEEGISRPQIDGKPKSKKEMLAEQREYKKKKAQKKVLRMKELEQEREDQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtctgaagagttggtaaagcagttgagcaattataaggcacagctgcagcaagtagaa
gctgcactctcaacagatccagaaaatgaagatctgcttaaattacagaaggacctccag
gaggtgattgagttgacaaaagacctgttgacatcacagccagcggagggcgtggccagc
accaatagctcagaggctgctgcgccaactcgaagctggagagtcggagactcctgcatg
gccgtttggaaccaggacggacagttgtatgaggcagaaatcgaggagatcgacaacgaa
aatggcacggcagccatcacctttagtggctatggcaatgcagaggtggtgcctcttcag
gcactcagagtctcagaggagggaattagcagaccacagattgatggaaagcccaaatcc
aaaaaggagatgctggctgagcagagggaatataagaagaagaaagcccaaaagaaggtg
ctgcgcatgaaggagcttgaacaggagagagaagatcagaaatccaagtggcagcagttt
aataataaagcctattcaaagaataagaaaggacaggtaaagaggagtatatttgcatca
ccagagagcgtaaatggaaaggtcggcgtcggcacgtgtggcatcgctgataaacccatg
actcagtacaacgacacttcaaaatataacgtcaggcatctgatgccccagtga

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