Paramisgurnus dabryanus (large-scale loach): 135788010
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Entry
135788010 CDS
T10799
Symbol
flnca
Name
(RefSeq) filamin-C isoform X1
KO
K27393
filamin-C
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135788010 (flnca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pdab04812
]
135788010 (flnca)
Cytoskeleton proteins [BR:
pdab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135788010 (flnca)
Intermediate filaments
Intermediate filament-binding proteins
135788010 (flnca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Big_3_5
Motif
Other DBs
NCBI-GeneID:
135788010
NCBI-ProteinID:
XP_065153980
LinkDB
All DBs
Position
23:26111578..26130835
Genome browser
AA seq
2715 aa
AA seq
DB search
MSNYSHFDDQPPQYNQGTELGEEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCIN
KTVTDLQKDLNDGLKLIALLEVLSQKKMCRKHNVRPNFRQMKLENVSVALEFLEREHIKL
VSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDDEEDEEVKKLTPKQRLLGWIQNKVP
QLPINNFNKDWRDGKALGALVDNCAPGLCPDWQAWDPKQPVENAREAMQQADDWLGVPQV
IAPEEIVDPDVDEHSVMTYLSQFPKAKLKPGAPLKPKQLYPKKAKAYGPGIAPQGNMVLK
PALFTVETLEAGLGEVIVYVEDPEGHTEEAKVVANNDKKRTFSVSYVPKVEGLHKVKVLF
AGQDIDKSPFMVNVAKALGDPNKVQARGPGLEPVGNVAHKPTYFDIYTAGAGAGDVKVVI
VDPQNKNNTVEVILENKGDNVFRCTYKPVQEGPHIIHVSFAGQPIPNSPFKVQISEAPPK
PSTVAPVQIHPVKKKASNANACRATGRGLQPKGVRVKEVADFNVFTKGAGTGELKVSVKG
PGGAEVPVKVRDVGDGVYKCDYCPVHPGKYHVNITWGGQPIPRSPFEVEVGAEAGLQKVR
AWGPGLKTGMVGKSADFVVEAIGTEVGTLGFSIEGPSQAKIECDDKGDGSCDVRYWPTEP
GDYAVHVICDDKDIKDSPFMAHILPAANDVFPEKVKAFGPGLEPSGVIVNKPTQFTVDAR
GAGRGSLKIYAQDAEGCVIDIKITDKGDGTFLCIYVPTKPIKHTIIITWGEVNIPKSPFR
VLVGEGCHPDKVKVFGPGIEKTGLKANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPAEA
DIDFDIIKNDNDTFTVKYTPPGPGRYTIMVLFADKEIPGNPFKVKVEPSHDAGKVRAEGP
GLNKTGVQVGTPTHFTIYTKGAGKAKPEVQFKTAVKGDAVKDFEIIDNHDYSYTVKYTAL
HQGEMAIMVTYGGDPIPKSPFNITVAPSLDLGKVKVQGLNEKVEVGKDQEFTVNTKGAGG
QGKLNVSITSPSGRQIPCKLESDKTKESTGVKYIPPEEGLYKVDISYDGNPVPGSPFSVE
GVMPADPSKVRAYGPGLKGGIVGQPALFTIDTKGAGAGGLGLTLEGPCEAKIECQDNGDG
TCSVAYLPTEPGDYNINILFGEAHITGSPFKAVVKSPLDAGKVKVSGPGLEKAKAGEVAS
FTVDCSRAGEAELTIEIVSDSGAQAEVRIQKNNDGTFSVTYTPLFHGMHTITIKYGGQQV
PKSPIHVQVEPSVDTSGIKVYGPGVEPRGVLKEVTTHFIVDARAQTKTKGNHVKIRIINP
SGANTDAHITDKGDGTYRVEYTAFEDGLHLIEVFYDDVAVPKSPFRVSVVEGCDPTRVRA
YGPGLESGLVNKPNCFTVETRGAGTGGLGLTIEGASESKMFCKDNKDGSCSVEYVPFTSG
DYDVNITYGGLPIPGSPFRVPVKDVVDVSKVKCSGPGLANRVAAHVAQTFTVDSSKAGLA
PLEVQLYGPTGALEPVVVKNNRDGTHTVNYTPAQEGPYTVCVKYANQEVPGSPFKVNSAP
THDASKVRASGPGLDTKGVAASMPVEFTIDARDAGKGLLTVQILDPEGKPKKASIHDNRD
GTYTVSYVPDMTGRYTITIKYGGENIPYSPYNVHAVPTGDASKCLLTVSIGGHRVESLGP
NITRAEETVITVDAKPAGKGKVTCTVLTPDGVELDMDVVENPDGTFDIYYTAPEPGKYVI
TIRFGGQHIPNSPFHVMATDQPVKPREDKKPMFQPLNLVIPFTVQQGELSGEVRMPSGKT
ARPLIRDNKDGTVTVQYQPTEKGLHEMDIKYDGNHIPGSPLQFYVDAMNSGMVTAYGPGL
CHGIVNKLASFTVITKNAGQGGLSLAVEGPSKAEISCKDNKDGTCTVSYLPTTPGDYKVI
VKFDNRHIPGSPFTAKILGDDSLRRSQLNVGSAADVSLKITETDLSFLTASIKAPSGKEE
PCLLKRLPNRHIGLSFTPKEVGEHEVSVRKSGKHVNNSPFKIMVGASEIGEASRVKAFGK
GLVEAHTFELAEFFVDTRNAGYGGLGLSIEGPSKVDINCEDVEDGTCKVKYCPTEPGNYI
INIKFADKHIPGSPFTVKVAGEGRMKESITRKRHAASIASVGSTCDLNLKIPGNWFQMMS
AQERLTRTFTRSSHTYTRTERTEISKTHGGETKREVHMEESTQVGGDPFKDVFESLLGRE
RLGIFGAMPQEGDTGIQGMIAQVTSPNGKVTDAEIVESGDSTYRVCFIPTEMGPHTVNVK
YRGEHVPGSPFQFTVGPLGEGGAHKVRAGGTGLERAVAGVPAEFSIWTREAGAGGLSIAV
EGPSKAEISFEDRKDGSCGVIYIVQEPGDYEASIKFNNEHIPDSPFIVPVAKLSDDARRL
TVTSLQEKDLKVNHEAQFAVQRNGARGVIDAKVHAPSGVVEECYVTELDSDKNAIRFIPR
ENGVHSIDVKFNGSHIPGSPFRVRVGEAEHVGDPGMVSAFGPGLEGGRTGVASEFVVNTC
NAGSGALSVTIDGPSKVKMDCTECPEGYRISYTPMAPGNYLISIKYGGPQHIVGSPFKAK
VTGMRLSGGHSLHETSSVIVETVTKTSKMSGAYSSLAGSKSASDASKVVCHGPGLSKAYV
GQKNNFSVDCSKAGTNTLMVGVHGPKTPCEDVSVKHMGNKIYNVTYAVKEKGNYVVIVKW
GDEIVPGTPFNITVP
NT seq
8148 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattactcacatttcgacgaccagccgccccagtacaaccagggcacagagctc
ggagaagaagaggaggagatgccagccacagagaaggatctggccgaggacgcgccttgg
aagaagatccagcagaacaccttcaccagatggtgcaatgaacatctcaagtgcatcaat
aagaccgtcacggacctccagaaagacctgaacgatggcctcaaacttatcgctctcttg
gaggtcctcagtcagaagaaaatgtgcagaaaacataacgtcagaccaaacttcagacaa
atgaagctggagaacgtctcagtggcgctggagtttttggaaagagagcacatcaaatta
gtgtctatagacagtaaagctattgtagatgggaatctgaagctaatcctgggtctcatc
tggacactcattctacattattccatctccatgccaatgtgggatgatgaggaagatgaa
gaggttaagaaactcacacctaaacaaagactgttgggctggattcagaacaaggttcca
cagcttcctattaacaactttaataaagactggagggatggcaaggccctcggtgcactg
gtggacaactgtgcccctggtctgtgccctgactggcaagcatgggaccccaaacagcct
gtcgaaaatgcgcgtgaagccatgcagcaggccgatgactggctcggtgttccacaggtg
atagctccagaggaaattgtggatccagacgtagatgaacattcggtgatgacatacctc
tctcagtttcccaaagccaaactaaagcctggagccccattgaagcccaagcagctgtac
cccaaaaaggcaaaggcctatggacctggtattgcgcctcagggcaacatggttttaaag
ccggcattgtttactgtggaaacgctggaagcgggacttggtgaagtaattgtgtatgta
gaagacccagaaggccatacagaggaggctaaagttgttgccaacaacgacaagaaaagg
acattctctgtcagctatgtgcccaaagttgagggtctccacaaggttaaggtactcttc
gctggacaggacattgataagagtccattcatggtaaatgtggcaaaagctctgggtgat
ccaaacaaagtccaagcaagaggtcctggtctggagccagtgggcaatgtcgctcataag
cccacctattttgacatctatacagcaggtgctggggctggtgatgttaaggtggtcatt
gttgatcctcagaataaaaacaacaccgtggaagttattctggaaaacaaaggtgataac
gtctttcgttgcacatacaaacctgtgcaggagggaccccacattatccatgtgagcttt
gccggacagccgatacccaacagccccttcaaagtgcagatctccgaggcacccccaaaa
ccctctaccgtggctccggtccagatacatcctgttaaaaagaaagctagcaatgcaaat
gcctgtcgggccactggccgaggactgcagcctaaaggtgttcgtgttaaggaggtggcc
gactttaatgtttttaccaaaggggcaggaactggagagctgaaggtctctgtaaaaggc
ccaggtggagcagaggtacctgtgaaagtacgggacgtcggtgatggagtatacaagtgt
gactactgtcctgttcaccctggaaaatatcatgtaaacataacatggggaggacaacca
atcccacgcagcccgtttgaagtggaagttggtgcagaggccggactgcagaaagtccga
gcttggggtcctggcttgaagactggaatggttggcaagtcagctgattttgtcgttgag
gccattggtacagaagtgggaactttagggttttccattgagggcccatcacaggctaag
atcgagtgtgatgataagggtgacggctcctgtgatgtgcgatactggcccactgaaccc
ggcgattatgcagtgcacgtcatctgtgatgataaagatatcaaagacagcccattcatg
gcacacatactcccagcagccaatgatgtctttcctgaaaaggttaaagcctttggaccg
ggcctggagccttctggagttattgtcaacaaaccaactcaattcactgttgatgcccga
ggagccggtagagggagcctgaagatctatgctcaggatgctgaaggctgtgtcattgac
attaagattactgataaaggggatggaacctttctttgcatatatgttccaaccaagcca
ataaaacacaccatcataattacttggggtgaggtcaacatacccaagagtcccttcaga
gttcttgttggtgaaggttgtcaccctgacaaagttaaggtctttgggccaggaatcgag
aaaactggcctaaaggctaatgagcccacttacttcactgtggactgcagcgaagctggc
caaggtgatgtcagcattgggatcaagtgtgccccaggtgtggtgggtccagcagaggca
gatatagattttgacataattaaaaatgacaatgacacctttacagtcaagtataccccg
cctggccctggccggtacaccattatggtgctctttgcagataaggaaatcccgggcaac
ccattcaaagttaaggtggaaccttcccatgatgctggtaaagtcagagctgagggacct
gggctgaacaagacaggtgttcaagtgggcactccaacccatttcaccatctacactaag
ggagctggaaaggctaaaccagaagttcagtttaaaactgctgtcaaaggagatgctgta
aaagactttgaaatcattgataaccatgactactcctacactgtgaagtatactgctctt
caccagggtgagatggccatcatggtaacatatggaggagaccccattcccaaaagccct
tttaacatcacggtagccccatcattagatctcggcaaagtcaaagttcaaggacttaat
gaaaaagtggaagttggaaaggatcaggagtttactgtcaacacgaaaggggctggtgga
cagggcaagttaaatgtgagcataacctcaccatctggtcgacaaataccttgcaaatta
gaatcagacaagaccaaggagtccaccggtgtgaaatacatcccacctgaggagggtctt
tacaaggtggacatcagctatgatgggaaccctgttccaggaagtcccttttctgtggag
ggggtcatgcctgccgacccctcaaaggtgcgtgcatatgggccaggacttaaaggtggt
attgtgggtcagcctgcactgttcactatagacactaaaggtgcaggtgctggcggtctg
ggtctgacattggaaggcccttgtgaggctaagatcgagtgccaagacaacggtgatggc
acctgctctgttgcctacctgcctacagaacccggggactacaatatcaatatcctgttc
ggggaagcacatatcactggctctcctttcaaagctgttgtcaagtcacctctagatgct
ggtaaagtaaaagtgagtggcccaggactggagaaagctaaagctggagaggtggccagt
ttcactgtggactgcagtagggctggagaggctgaactcaccattgagattgtgtcagat
tcaggggctcaagctgaagttcggatccagaagaacaatgatgggaccttttcagtcacc
tacactcctctttttcatgggatgcacaccatcaccattaaatatggaggtcaacaggta
cccaagagtcccatacatgttcaagtggaaccctctgtggacacaagtggaattaaagtg
tatggaccgggagttgaaccaagaggagtccttaaggaggtgactacacactttattgtg
gatgccagggcacaaacaaagaccaaaggaaatcatgtcaagatccgcatcatcaatcca
tctggcgcaaacacagatgcacatatcacagataagggagatggcacctatagagtggaa
tacactgcttttgaggatggtctgcatctgatcgaggtattttatgacgatgttgctgtt
cccaagagcccctttagggtgtcggttgtagaaggttgtgacccgactcgtgttcgtgct
tatggtccaggactggaaagtgggctggtcaacaaacctaactgctttacagtggagaca
aggggtgccggaacaggtggtttaggtctgaccattgaaggagcctcagaatcgaaaatg
ttctgtaaagacaacaaagacggtagttgcagcgttgaatatgtgcctttcacttcagga
gactatgatgtcaacatcacttatggaggtctgccaattccaggcagcccattccgcgtg
ccggtgaaggatgtggtagatgtcagtaaggtcaagtgctcaggtcctggacttgctaac
agggtggcagcacatgttgcacagacttttactgtagacagcagcaaggccggactggct
cctttagaggtgcagctgtatggtccaacaggggctctagagcctgtcgttgttaaaaac
aatcgtgatggaacacatactgttaactacacccctgcacaggagggaccgtacactgtg
tgtgtcaaatatgccaaccaagaagtacctggaagtccattcaaagtcaactcagccccc
acgcatgatgccagtaaggtgcgtgccagcggtcctggtctggacactaaaggagtggca
gccagtatgccagtcgagttcaccattgatgctcgagatgcaggaaaaggccttctgacg
gtccaaatactggatccagagggaaaaccaaagaaagccagcatccatgacaacagagat
gggacctacacagtatcttacgtgccagacatgactggccgctacaccatcactatcaaa
tatggtggagaaaacatcccatactcaccctacaatgtccatgctgttcccaccggtgat
gccagcaaatgtctactcacagtgtctattggagggcatagagttgaaagccttgggccc
aacattacgagggcagaggagacggtcatcactgtggatgctaaaccagctggtaaagga
aaggtgacatgtacagtgctgacccctgatggcgtggagctggacatggacgttgtagag
aatcctgacggcaccttcgatatctactacactgcacctgagccaggcaaatatgtcatc
acgatccgctttggaggacaacacattcccaacagcccctttcatgtcatggctacagat
cagcctgttaaaccaagggaggacaaaaagcctatgttccaaccattaaacttagttatt
ccatttactgttcagcagggagaactcagtggagaagttcgtatgccctctggtaaaaca
gcccgtcctttaatcagggataataaagacggaacagtcacagtgcagtatcagccaacc
gagaagggattgcatgaaatggatataaaatatgatggcaaccacatcccaggaagtcct
ttgcagttctatgtggatgcaatgaacagtggaatggtaacagcttatggacctggtcta
tgtcatggcatcgtgaataaactagccagttttactgtcatcaccaaaaatgctggacaa
ggtggcttgtccctggctgtagagggtccatctaaagctgaaatcagctgcaaagacaat
aaagatggtacctgtactgtgtcctatttgcctaccacacctggtgattacaaagtcatt
gtcaagtttgacaacaggcacattcctggcagcccattcactgctaaaatcctgggtgac
gattcactcagaagatctcagctgaatgttggctctgcggcagatgtctcactgaagatc
acagaaacagacctcagctttttaacggccagcatcaaagctccttcaggaaaagaggaa
ccatgcctactgaaaagactgcccaatcgacacattggtctttcctttactccgaaggaa
gtgggggagcatgaggttagcgtgagaaaaagtggaaaacatgtaaacaacagtcccttc
aagattatggtaggggcttctgaaattggcgaggccagcagggtaaaggcgtttggtaaa
ggtcttgttgaggctcatacatttgaattggcagagttctttgtggacactagaaatgcc
ggatatggaggtcttggattgtcgatcgagggaccgagtaaagttgatatcaattgtgag
gatgtggaagacggaacctgtaaagtgaagtactgtcctacagaaccaggaaactacatc
atcaacatcaagtttgcagacaaacacataccaggaagtcctttcacagtgaaggtagca
ggagaaggacgcatgaaagagagtataacaagaaaaagacatgctgcttctattgcttca
gtaggaagcacatgcgacctcaaccttaaaattccaggaaattggttccagatgatgtct
gcacaggagcgcttgactcgtaccttcacccgtagcagccacacctacacacgtacagaa
cgcacagaaatcagcaagactcacggtggtgagacgaagcgagaagtacacatggaggag
agcacacaagttggcggcgacccctttaaagatgtttttgagtccttactaggaagagag
cgactgggtatttttggtgcaatgccccaggaaggtgacacagggattcagggtatgata
gcccaggtgaccagccctaatgggaaggtgacagatgcagagattgttgagagtggggac
agcacatacagagtctgcttcattcctactgaaatgggccctcatacagtcaatgttaaa
tacagaggcgagcatgttcctggaagccccttccagtttaccgttgggccccttggagaa
ggaggtgcccacaaggtccgtgctggaggtacaggactcgagagagcagtcgctggagtt
ccagctgaattcagtatttggacaagagaggctggggctggtggtctgtccattgctgtg
gagggtccgagcaaagctgaaatctcatttgaggatagaaaagatggatcctgtggggtt
atttacatagtgcaggagccaggcgactatgaagcttccataaagttcaataatgagcat
ataccagatagcccctttatcgttccggtggcaaaactgtccgatgatgcacgtcgactt
actgttacaagtcttcaggagaaggatctaaaggtgaatcatgaagcccaatttgccgtt
cagaggaacggggcgagaggtgtaatagatgctaaagttcacgctccctctggtgtggtc
gaagagtgttatgtcactgaactggatagtgacaagaatgcaattcgcttcattccacgt
gagaatggtgttcattcaattgatgtgaaatttaatggaagccacataccaggtagccca
ttccgagttcgggttggtgaggcagaacatgttggagatccaggcatggtatctgccttt
ggtccaggactcgagggtggccgcacaggggttgcctctgagtttgtcgtcaacacatgc
aatgctggatcaggggctttatctgttactattgatggcccttcaaaggtcaaaatggac
tgtactgaatgcccagagggttacaggatctcttatacgcctatggcaccaggcaactat
cttatatccataaagtatggtgggccacagcatattgttggcagtcccttcaaagcaaag
gttacaggaatgcgtctgtctgggggtcacagtctacacgaaacttcatcagtcattgta
gagactgtaaccaaaacttctaagatgtccggagcgtacagctctttggccggatccaag
tcagcatcagatgccagtaaggtcgtgtgtcatggccctggcctctccaaagcctatgtg
ggtcagaagaacaacttttccgttgactgtagtaaagcaggtacaaacacgttgatggtt
ggtgttcatggtcccaaaactccatgtgaagatgtgtctgttaagcatatgggaaacaag
atttacaacgtaacctatgcagtaaaggaaaaaggaaattatgtagttattgttaaatgg
ggggatgaaattgtaccaggtactcccttcaacatcacggttccttaa
DBGET
integrated database retrieval system
