Pocillopora damicornis (lace coral): 113672142
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Entry
113672142 CDS
T05773
Name
(RefSeq) short transient receptor potential channel 6-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113672142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdam04040
]
113672142
Ion channels [BR:
pdam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113672142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Motif
Other DBs
NCBI-GeneID:
113672142
NCBI-ProteinID:
XP_027044221
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MAAHALRRGRTASTSLLDVLEATMPEMTLSEEEQLFFEAVRRGDLRQVREFFKRKSSSLE
SEEGTERQAKVGNFALTLAAQQDNYDLVKFFLSMGYRIEEPHPRSCSCEGCNGMGSLEKA
LYRLNGYRALASPVYLSLSYLADCEKQELTAEYTCTNDPVYQAFVLNGKLELLAREEYEF
KKDYSNLSTRCEEYAVALLNLCRNMTEIGCVMTMPSIKGLAHVRVRTANEAAKKLSVLNF
AIKNKNERFVAHPYSQLMLNAVLYLDFDKNWIYRRNITKTTFFVLHTLLLPLWSIFYLVT
PDNKLSQKLATPLAKFISHTGSFCWFLFILILSSVQDRLGISLLEISWIDILTAMWVLGL
IFEEMKEFYRQGRERYFAQWWNIVTILMLLFFLLAGLFWLLGSSALMVKDGNYSFKYLVR
SISRDSAFRFLFISNSIFSMAFLVSFFHLSNSLQVNSGIGPLQLSLIKMCQDVGKFLLLF
LLVFVSFSMAIRKVYSQFEQIVNLYPAKEHSQNSHEFSGFSAGLRKLFWALFDKTDLEAF
ELESSTFYITQTTGETLFAIFNIVAILISLNMLIAMMSNSFQQIADDADIQWKFSRTGMW
MQYVDKGSVLPPPFNLLPNRKHFVDLCRRIKNWIKPQKKEHYDDLDSSEGDEEQDEDMIE
REKILKLLIDRYFFNSRQARDRLVLTTALKAFGSSVQNESTEATDSFPNTGEEQQPKMLG
WFSRFQHK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcatgcattaagacgcggaaggacagcttcgacgtctctgttagacgtttta
gaggctactatgccggagatgaccctttctgaagaagaacaattattctttgaagccgtc
cgcagaggggacttgcgtcaagtgagagaattttttaaaagaaaatccagctctctcgag
tctgaggaaggaacggaaagacaagctaaggtgggaaatttcgcacttaccctcgctgca
caacaggataactacgatttggtgaagtttttcctctccatgggatatagaattgaggaa
ccgcatccccgctcttgttcgtgcgaaggctgtaatggaatgggaagcctagagaaagct
ctatatcgactgaatggttatcgggccttagccagcccggtttatctctcgttgtcgtat
ctcgccgactgcgagaaacaggaactaaccgctgaatatacgtgtacaaatgaccctgtt
tatcaagcatttgtgctcaatggaaagctcgaacttctcgcccgggaggaatacgagttc
aagaaggattattcaaatctgtcgactcgctgtgaagagtacgcggtggcactgctgaat
ctctgcaggaacatgacagagattggctgcgtgatgaccatgccttccatcaaggggcta
gcacacgttcgagtcaggacagcgaatgaggcggcaaagaaattgagtgttcttaacttt
gccatcaagaacaagaatgagaggtttgtggctcatccgtattctcaactcatgttaaat
gcagtgctttacctcgacttcgacaagaattggatttaccggagaaatatcacgaaaact
accttctttgttcttcacacgctcttattacctctttggtccattttttatcttgtcacg
cccgacaataaactgtctcagaaactggccactccgctggccaaattcattagtcatacg
ggctctttctgctggttcttgttcattctgattctctcctcagttcaagacaggctagga
atttcactcttggaaatttcttggatagatatcttgaccgctatgtgggtgttaggtctc
atctttgaagaaatgaaagagttctacagacaaggaagagagcgttactttgcccaatgg
tggaatattgttaccattttaatgttactcttcttcttactggcgggcttattctggctg
ttgggttcctcagcgttgatggttaaagatggaaattattcgttcaaatacctcgtcaga
agtatctcgagagattcagcctttcgattcttgtttatttcaaacagcattttttcgatg
gcgttcttggtaagttttttccacttgtcaaactcgctgcaagtgaacagtggcattggt
cctctgcagttatctttgataaagatgtgtcaagatgtaggcaagttcctgctgttgttc
cttctggttttcgtgtccttttctatggccatccgcaaagtttattcacaatttgagcaa
attgtgaatttatatccggctaaggaacactctcaaaattcccatgaattctcaggattc
tctgctggcttgaggaagcttttttgggctctgtttgataaaacagatcttgaagcattt
gaacttgaatcgagcacgttctacataactcagacgactggagagactttgtttgctatt
ttcaatatcgtcgccattttgatctcgctcaacatgctcattgcaatgatgtcgaactca
tttcaacaaatagcggacgatgctgatatccaatggaagttttccagaacagggatgtgg
atgcagtatgtggacaagggaagtgttcttcctcctccatttaaccttctgcccaatcgg
aagcattttgttgatttgtgtcgacgtattaaaaactggatcaagcctcaaaagaaagag
cattatgacgatttggattcaagtgaaggcgatgaagagcaagacgaagatatgattgag
cgtgagaaaatcctcaagcttcttattgatcgttacttctttaactcgcgtcaagccagg
gatcgtctcgtactcaccactgcgctgaaagcttttggaagtagcgttcagaatgaatca
acagaggcgacagactcatttccaaataccggagaagagcaacagcctaaaatgctcgga
tggtttagtcgcttccaacataaataa
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integrated database retrieval system
