Pocillopora damicornis (lace coral): 113673552
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Entry
113673552 CDS
T05773
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04137
Mitophagy - animal
pdam04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113673552
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113673552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113673552
04121 Ubiquitin system [BR:
pdam04121
]
113673552
Enzymes [BR:
pdam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113673552
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113673552
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
113673552
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
PUMA_CC
Rod_CreS
Sec3_CC
DUF8567
DUF1664
Helical_needle
Toast-rack_PspC-Cterm
MCPsignal
DUF641
DUF6924
DegS
Motif
Other DBs
NCBI-GeneID:
113673552
NCBI-ProteinID:
XP_027045759
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MADISEEGYRLRKVQSKLANNCQNDSAWLVQQKMKQSEVKKHNELSAILHLNLLLTSVLR
LEEQVKSQLSMGGAWGGGTSDQWMRRSEMTIANAISSIDTVVREQTDLRQKLEDNSMRLV
SMEKRVSTHRDRFPQSATFSSLQPLPISDEISRRLTNAENGTNNIEFLVNETRRELNEVR
QEVSSVKRQLDGAVDSIRRLERRMESVEHNLALRNVVLSDIEEHVQQQQVYTYNGILLWK
ISDFARKKNDAITGREVSIYSPCFHTSQHGYKMRARLYLNGDGMGKGTHLSLFFIVMRGD
YDALLRWPFRQKVTFMLLDQDNVEHVVDA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatttctgaggagggataccgtttgcgtaaggttcagtcaaaactggcaaac
aattgtcagaacgatagcgcgtggttggtacaacagaaaatgaagcaatccgaggtcaag
aaacataatgagctgagtgcaattttgcacttaaatctactcttgacgagtgttcttcgg
ctagaagagcaagtgaaaagtcagctctctatgggtggtgcatggggtggtggcacctcc
gatcagtggatgagacgatcggagatgaccatcgctaacgccatatcaagcatcgacaca
gtggtacgcgagcaaaccgacttacgacagaagctagaagataattctatgagacttgtg
tcgatggaaaaaagagtttcaacccatagagaccggttcccacaatcggcaactttctct
tcgttacaaccactccccatttcggacgagatttcacgacgtctcacaaatgccgaaaat
ggcaccaataatatcgagttcttggtaaacgaaacaaggcgtgagttgaacgaagtcaga
caagaagtatcgtctgttaaacgccaattggatggcgcggtggacagtattagacgactc
gaacgaagaatggagtctgtagaacataatttggcgctcagaaatgttgttttgtctgat
atcgaagaacatgttcaacagcagcaagtttatacatataatgggatcttactctggaaa
atatcggattttgcacgtaagaaaaatgatgccataactgggcgagaggtctcaatatat
agcccgtgctttcataccagtcagcatggttacaaaatgcgcgcgcgactttacttaaac
ggtgatggaatgggtaaaggaacccatctgtcgctgttcttcattgtcatgcgtggagac
tacgatgcattactccgctggccatttagacagaaggtgaccttcatgctgttggatcaa
gataacgtagagcacgtggttgatgct
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integrated database retrieval system
