Pocillopora damicornis (lace coral): 113677155
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Entry
113677155 CDS
T05773
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113677155
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GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
TRAF3_RING
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-TRAF_2
RING_XB3-XBAT31
zf-RING_6
DM
Cnn_1N
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
113677155
NCBI-ProteinID:
XP_027049714
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSKAKIKFLKRLDKKLLCPLCQSVFKQPWQTSCGHQFCFECLQALLRAASPTCPIDGNTI
ARDSSFHDKCCEREVLDLPCFCQYEARGCNWRGELRHVQAHGESCEYTDVVCRECKSLME
RRLLENHKVNKCINRRSQCIHCGAEVRDSALKDHFKTCTKFPINCILSCGKEAIPRDLMK
EHMTVECPNSEVPCHFTLYGCKFKGKRDELQRHVEASIKSHLDLLNQSSYELKVRGQEME
EGLARLQSKLSGCGKQICRQNEQLAASNTSIQMQQTKISKAEREICEQREDLDKLLRDSK
LVENTQGFVVSLQMDEILETLKENETKATQLKRELSRLSSKIPNPYEPRRVHDLATDHRL
ERAENQLSSHETQLSENSLQIEMLEATSYDGFYIWKIDHYSRKYQDALSERTASIYSPPF
YVGRFGYKVSVRLDPNGDGIGKGTHISLFFVVMRGEYDAILPWPFVQKVHFRLVDQDKIR
DIVETYHPDPNSSSTKRPTSNMNIASGSPTFVSQVEVRKGGYIRGDTMFIKVTVDMANPP
GELAR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggctaaaataaagtttctaaagcgactcgataaaaaacttttgtgtccactg
tgccaaagtgtcttcaagcaaccctggcagacatcgtgtggacatcaattctgttttgaa
tgcctccaggctcttctcagagctgcttctccaacatgtccgatagacggcaacacgatt
gcaagagattcatcgtttcatgataaatgctgcgagcgggaagtattagatcttccatgt
ttctgccagtacgaagccagaggatgtaactggcgaggagagctacgacatgtacaggca
catggagaaagctgtgagtacaccgatgtggtgtgcagagaatgcaaaagcttaatggag
agaagacttcttgagaatcataaggttaataaatgtatcaaccgaagaagccaatgtatt
cattgtggagcagaagtacgagacagtgctttgaaggatcatttcaaaacatgtacaaag
tttccgatcaattgcattttaagctgtggaaaggaagccattcctcgtgatcttatgaaa
gaacatatgactgtcgaatgccccaatagtgaggtcccatgtcatttcacgctttacgga
tgtaaattcaagggaaagagagacgaacttcagagacacgtggaagctagtataaagagc
cacttagacttgttaaaccaatcaagttatgagcttaaagtgagaggccaagaaatggag
gaaggactagctcgtctgcagagcaagctaagtggttgtggaaaacaaatttgccgtcaa
aatgagcagcttgcagcgtcaaatactagcatacaaatgcaacagactaaaatatccaaa
gctgaaagggagatttgcgaacagagagaggatctggacaagcttcttcgagattccaaa
ttggttgaaaacactcaaggatttgttgtctctcttcagatggacgagattttagaaact
ttaaaggaaaatgaaacaaaggcgactcaattaaaaagggagctaagtcgtctgagcagc
aagataccaaatccttatgagccacgaagagtccacgacctcgccactgaccatcgatta
gaaagggctgagaaccaactttcctcacacgaaactcaactatctgagaacagcctccaa
attgaaatgcttgaggccacatcctatgatgggttttacatttggaaaatagaccactac
agtcgaaaatatcaagatgctttatctgaaaggacagcatcgatctacagtcctcctttc
tacgtcggtcgctttggctacaaagtttctgtccgactcgacccaaatggagatggcata
ggaaaagggactcatatatcactttttttcgttgtcatgaggggtgaatatgacgccatt
ttaccctggcctttcgtacaaaaggttcacttcagactggtggaccaggataaaattcga
gacattgttgagacatatcatcccgatccaaatagcagtagtacgaagagacccacctca
aatatgaacattgcatcgggctctcccacattcgtttctcaagtagaggtccgtaagggt
ggttatattcggggcgataccatgtttattaaagtgactgtcgatatggcgaatcctcct
ggagagctggcgaggtga
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