Pocillopora damicornis (lace coral): 113679643
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Entry
113679643 CDS
T05773
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113679643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdam03041
]
113679643
Spliceosome [BR:
pdam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
113679643
Complex C
U5 SnRNP specific factors
113679643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFTUD2
GTP_EFTU
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
TniB
Septin
Motif
Other DBs
NCBI-GeneID:
113679643
NCBI-ProteinID:
XP_027052405
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDEESEEEEDADEEEAVEYAEDDEDEQMDQDEEPQMQVVLHE
DKKYYPTAEEVFGPEVETVVQEEDTQPLTEPIIKPVAKKKFFHEEQDLPTTTYDIEYLAD
LMDNPDLIRNVVLAGHLHTGKSVFVDCLFEQTHPEIQAKEGSDLRYSDTLFTEQERGLSI
KSVPVSLVLPDTKGKSYLINVFDTPGHVNFSDEVTAAIRLCDGVMIFIDASEGVMLNTER
LLKHAVQERLAVTICINKIDRLMLELKLPPTDAYYKLKHIVDEVNGLLSVYSDGADDYVM
SPFLGNVCFASSQYRFCFTLFSFASLYVDTFGVTIDPRDFAKRLWGDMYFNSKSRKFTRK
APLSTSQRSFVEFILEPLYKIFAQVVGDADTSLPKLMDELGIHLSKSEMQMNIRPLLSLV
CKRFFGDFTGFVDVCVQHIPSPKAAAKTKIEHVYTGPLDTEVVDAMNDCDPDGPLMLHTS
KQYPSQDATAFHVFGRVMSGTIYAGQQARILGENYTIEDEEDSRVGTVGRLWIAEARYNI
EVSRVPAGNWVLIEGIDEPIVKTSTITQVQGNDEAYIYRPLKFNTCSAIKIAVEPHNPSE
LPKMLDGLRKVNKSYPLLTTKVEESGEHVILGTGELYLDCVLHDLRKMYSEIEIKVADPV
VAFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEKVLITWNKKKLGEFFQ
TKYDWDLLAARSIWAFGPDNSGPNILVDDTLPSEVDKSLLNTVKDSIIQGFQWATREGPL
CDEPIRNVKFKILDAVIAGEPIHRGGGQIIPTARRVAYSAFLMATPRLMEPYFFVEVQAP
ADCVSSVYTVLARRRGHVTQDAPVPGSPLYTVKAFIPAIDSFGFETDLRTHTQGQAFCLS
VFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPMLL
ELARQDVMFNYPM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctgtatgatgaattcggaaactacattggtccagaactcgacagtgac
gaggaaagcgaagaggaagaggacgcagacgaagaagaggcagtagaatatgcagaagat
gatgaagatgagcagatggaccaggatgaagagcctcaaatgcaagtggttttgcacgag
gacaaaaagtattatcctactgcagaagaggtctttggtccagaagttgagaccgtcgtc
caagaagaagatacacagccattgacagagcccattattaaacctgtggcaaaaaagaag
tttttccatgaagagcaagatctacctacaacaacttatgatattgaatatttggcagat
ttaatggacaacccagatcttatcagaaatgtagtcttagcaggacatttgcacacagga
aagagtgtttttgttgactgtctttttgaacaaacacatcctgagatacaagctaaagaa
gggagtgatcttcgttacagtgacacattgtttactgaacaagagagaggtctgagtatt
aagagtgttccagtgtctttagttttgccagacactaaggggaagtcgtacctcatcaat
gtctttgacaccccaggacatgtaaacttctcagatgaggtcactgccgcaataagattg
tgtgatggagttatgatcttcattgatgcctctgagggggtgatgttgaacacagagcga
ctcctaaaacatgctgttcaagaaaggcttgctgtaactatttgtatcaacaagattgat
cgactgatgttggagttaaagcttccccctacagatgcctactacaaattaaaacatata
gtggatgaagtgaatggactactcagtgtctactctgatggtgcagatgactatgtcatg
tccccttttcttggaaatgtctgttttgcgagctcacagtatagattctgcttcacactc
ttttcatttgcctctctttatgttgacacttttggtgtcacaattgatccaagagacttt
gctaagcgtttgtggggtgacatgtacttcaattctaaatcgcgtaagtttacacggaaa
gcccctttaagtacttctcagagaagctttgtggagttcatcttggaacctttgtataag
atctttgcacaggtggtaggtgatgcagacacgagccttccaaagcttatggacgagttg
ggtattcatttgtcaaagtctgagatgcagatgaatatcagaccattacttagtcttgtt
tgtaaaagattctttggagattttacaggatttgtagacgtgtgtgttcagcatatacct
tctcccaaagcagcagccaagactaagatagaacatgtgtacacaggaccgctggacacc
gaagtcgtggacgccatgaatgactgcgatcctgatggacctctcatgcttcatacgtct
aaacaatatccttcccaagatgccacagcttttcacgtgtttggacgagtcatgagtgga
acaatttatgctggtcaacaagctcgaatactcggtgagaactacactatcgaggacgag
gaagactctcgcgttggaacggttggaaggttgtggatcgccgaagcaaggtacaacatt
gaagttagccgtgtaccggcaggaaactgggtgctaattgaaggaatcgacgaacctatc
gttaaaacatcaactatcactcaagtacaaggcaacgacgaggcgtatatatacagaccg
ctgaagtttaacacatgctcagccattaagatcgccgtggagcctcacaatccttctgag
ctgcctaagatgttggacggtctgaggaaagtgaacaagagctatcccctgctcaccaca
aaggttgaagagtcaggagaacatgttattcttggtacaggagagctttatttggactgt
gtcctgcacgatctgagaaagatgtactccgagatagaaatcaaggtcgctgatcctgtt
gtggcgttttgtgaaactgtcgtagaaacttcatcactcaagtgcttcgcagaaacgcca
aacaaaaagaacaagatcactatgattgcagaacctttggagaaaggcttagctgaggac
attgaaaatgaaaaagttttaattacatggaacaagaaaaagcttggagaatttttccaa
accaaatacgactgggatttgttggcagctcgttcaatctgggcatttggacctgacaat
tctggaccaaatattcttgtagacgatacgcttccgtctgaggtggacaaaagtttactc
aacactgtgaaagattcaattattcaaggttttcagtgggctacgagggagggacctctt
tgtgatgagccaataagaaatgtgaagttcaagatccttgatgctgtgatcgctggcgaa
ccaatccacagaggaggagggcagatcattcctacagccaggagagtggcgtactcagca
tttttgatggctacacccaggctgatggagccgtatttcttcgttgaggtccaggctcca
gctgattgtgtgtcctcggtatacaccgtgttagctcgtcgaaggggtcatgtaactcag
gatgcaccagttcccggttctccactgtacacagttaaggctttcattcccgctattgac
tctttcggatttgaaactgatctgcggactcacacccagggacaggcgttctgtctgtca
gtatttcaccactggcagatcgtaccaggagatcctctggataagagcattattattcgt
ccgttggaaccacaaccagccactcatctggccagagaattcatgatcaagacaaggaga
agaaagggtttgagtgaggacgtaagcatcaacaaattcttcgacgatcctatgttgctg
gagttggcccgacaagatgtcatgttcaactatccaatgtga
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