KEGG   Pocillopora damicornis (lace coral): 113682628
Entry
113682628         CDS       T05773                                 
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
  KO
K03174  TNF receptor-associated factor 3
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    113682628
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 TRAF3_RING zf-RING_2 zf-C3HC4_4 CEP135_TSGA10_CC zf-RING_6 Ninein_long_CC FKBP15 zf_C2HC_14 TMF_TATA_bd KIF21A_4th DUF7573 DM NOCA1_mid RING_XB3-XBAT31 Troponin Filament
Other DBs
NCBI-GeneID: 113682628
NCBI-ProteinID: XP_027055591
LinkDB
Position
Unknown
AA seq 559 aa
MVVKVDGKLETKFVDGLDERLQCPICRSIFDEPWQTSCGHRFCGNCLELLLGSENARCPI
DNEPLSREQSFRDKCCEREVLGVQCFCRFNDKGCEWKGELRQLELHNFSCQYGDVKCQAC
DETVERRYLNMHRNRDCINRDEACTYCGGEVRHSKMKEHLNVCLKFPIGCILNCGEECIP
RDMMEEHLTARCLKAEHMCPFSVHGCAFQGTKQIIDQHVADGIESHLEMMNLSSHKCAEI
TKQMEEKICRLEKEKSALEKQLQNQAEQAAAARQNIQTQQTKLSHVENSILELKRTAEKL
LADLRVFEASRTIEGFVSSQMEEIMKTLREHEKEVNSLQGEVARLKLSPATPKGASDYQP
NQGVGLASEYERRLDRNEHQLALHDIQLSDQDMQIQMLEATSYNGTYIWKIDRYSLRFQE
AVAGKTLSIYSPPFYVGRFGYKVCARLYPNGDGIGNGTHMSIFFVVMRGEYDALLPWPFL
QKVHFRLIDQDRIRDVNDAFRPEPNSSSFKRPTSDMNIASGCPTFISHMELRQGGYIRND
TMYMKIKVDTCGLRGDAWQ
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggttgtcaaagtcgacggaaagttagaaacaaaattcgtcgacggactagatgagagg
ctccaatgcccgatctgcagaagcattttcgatgagccctggcaaacgtcatgtggacat
cgcttttgtggaaactgtctggaactccttttgggatcagaaaacgcaagatgtccgata
gacaacgagccactttcaagggagcaatctttcagggataaatgctgtgaaagagaagtt
cttggtgtgcagtgtttctgccgatttaatgacaaaggatgtgaatggaaaggagagctc
agacaactggagttacacaattttagctgtcagtacggtgatgtgaaatgtcaagcctgt
gatgaaactgtggagagaagatacctcaatatgcacaggaatcgtgattgtatcaacagg
gatgaggcatgtacttactgtggtggtgaagttcggcatagcaaaatgaaggaacatttg
aatgtctgccttaagtttccaatcggctgcatcttaaactgtggtgaagaatgtattcca
agagacatgatggaggaacacttgaccgcacgttgtcttaaggcagaacatatgtgtcct
ttcagtgttcatggttgtgcatttcagggcactaaacaaataatcgatcaacacgttgcc
gacggtattgagtctcacttggaaatgatgaacctctccagtcataaatgtgccgagata
acaaaacaaatggaagagaagatatgtcgtctagaaaaagaaaaaagtgctttggaaaag
caacttcaaaatcaagcagaacaggcagcagctgcaagacaaaacatacaaacgcaacag
acaaaattgtcccacgtagaaaattccattctcgaactaaagaggacagctgagaaactg
cttgctgatttgagagtttttgaggcatctagaacaatagagggttttgtctcgtctcag
atggaagaaataatgaaaacgctgcgagagcatgagaaggaggtgaacagtcttcagggt
gaagtggcccgtttgaagttatcccccgccacgccgaaaggtgcgagtgattaccaacca
aaccaaggtgtgggtctcgcaagtgagtatgagcgccgactagacaggaatgagcaccaa
ctggcattacacgacattcaactgtccgatcaagatatgcagattcaaatgctggaagct
acgtcgtataatggtacctacatatggaaaatcgaccgctacagccttcgcttccaagag
gctgttgctggaaagactctatctatttacagtcctcctttctatgtaggtcgatttggg
tataaagtttgtgctcgtctttaccccaatggagacggaattggaaacggaacgcatatg
tcaatattctttgttgtcatgaggggtgaatacgatgctttattaccttggccgtttctc
caaaaagtccactttcgactaatagaccaagacaggatccgggacgtaaatgatgcgttt
cgccctgagcctaacagctcaagctttaaaagacccacatcagacatgaacatagcatct
ggctgcccgactttcatttctcatatggaactgagacaaggtggctatatccggaacgat
actatgtatatgaaaataaaagttgatacctgtggtctgcgaggagatgcgtggcaataa

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