Pocillopora damicornis (lace coral): 113682660
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Entry
113682660 CDS
T05773
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113682660
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Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-Nse
DM
RING_XB3-XBAT31
HMMR_N
zf-RING_4
Sina_ZnF
Zn_ribbon_ACC
Motif
Other DBs
NCBI-GeneID:
113682660
NCBI-ProteinID:
XP_027055627
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MVVTIDAIVDTDMKFVNRVDERLNCPICKKVFDEPWQTSCGHRFCRHCLERLLGQEDPRC
PKDGESISRQQSFRDKCCEREVLNLQCFCRLNKKGCDWKGELRHLKTHEDSCQYGNVKCQ
ACSETVERRQLAAHREQDCINRAVACTYCGGEVWHSNMKDHLDVCPKFPIHCFLNCGEKG
IPRDMMEEHMTKRCLKAEHLCPFSVHGCEFKGTKQTIDPHVVENIESHLEMMSYSSHECN
EKSKQMEEKIYRLEQEKSALEHQLQNQAEVLAAARQNIQTQQTKLSHVENSIIEQKRTTE
KLLADLKAFEAFRTNGDIVSSQMEEIMNTLREHEKEVSSLQGEVARLKLSPATPKGESNY
RPKSDVSVTRESERRLDRNEHQLALHDIQLSDHDMQIQMLEATSYNGTYFWKIDRYSQRF
QEAVSGKTLSIYSPPFYVGRFGYKVCARLYPNGDGIGKGTHLSMFFVVMRGEYDALLPWP
FLQKVHFRLIDQDRIRDAYDAFRPEPNSSSFKRPTSDMNIASGCPTFISHIELRQGGYIR
NDTMFIKITVDTTGLQGDMWQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcacaatcgacgcaattgtggatactgatatgaaattcgtaaacagagtagac
gaaaggctcaattgcccgatctgcaagaaggttttcgatgagccctggcagacatcatgt
ggacatcgattttgtaggcattgtctggaacgtcttttaggacaagaagacccaagatgt
ccgaaagacggtgaatcaatttcaagacagcaatcttttagggataaatgctgtgagaga
gaagttcttaatctccagtgtttctgccgacttaataaaaaaggatgcgattggaaaggg
gagctcagacatctaaagacacacgaagatagctgtcagtacggtaatgtgaaatgtcaa
gcgtgcagtgaaactgtggagaggagacagcttgcggcgcacagggagcaagattgtatc
aacagggcagtggcgtgtacttattgtggtggtgaagtttggcatagcaatatgaaggac
catttggatgtctgccctaagtttccaatccattgcttcttgaactgtggagagaaaggt
ataccaagagacatgatggaagaacacatgaccaaacgttgtcttaaagctgaacatctc
tgtcctttcagcgttcatggctgtgaatttaagggcactaaacaaacaatcgatccacac
gttgttgagaatatcgagtctcatcttgaaatgatgagctattcaagccatgaatgtaac
gagaaatcaaaacagatggaagagaagatatatcgtctagaacaagaaaaaagtgctttg
gaacatcaactacaaaatcaagcagaggtgttggcagctgcaagacaaaacatacaaacg
caacagacaaaattgtcccacgtagaaaactccatcatcgaacaaaagaggacaactgag
aaattgcttgccgatttgaaggcttttgaggcatttagaactaatggggatattgtctcg
tctcagatggaagaaataatgaatactctgcgagaacacgagaaggaggtgagcagtctt
cagggtgaagtggctcgtttgaaattatcccctgccacgccgaaaggtgagagtaactac
cgtccaaaatccgacgtgtctgtcactcgtgagtccgagcgccggctggacaggaatgag
caccaactagcactgcacgacattcaattgtccgatcatgatatgcagattcaaatgctg
gaggctacatcgtataatggcacctacttttggaagatcgaccgctacagccaacgcttc
caagaggctgtttctggaaagactctatctatctacagccctcctttctatgtaggacgg
tttgggtacaaagtatgtgctcgtctctaccccaatggagacggaattggtaaaggaacg
catttgtcaatgttctttgttgtcatgaggggtgaatacgatgctttattaccttggccg
tttctccaaaaggttcattttcgactgatagaccaggacaggatccgggacgcttatgat
gcgtttcgccctgagcctaacagctcaagctttaaaagacccacgtctgacatgaacata
gcatctggctgcccgacgtttatttctcacatagaactaaggcaaggtggctatattcgg
aacgatacaatgttcattaaaataactgtagatactactggtctgcaaggagatatgtgg
cagtaa
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