KEGG   Pocillopora damicornis (lace coral): 113685127
Entry
113685127         CDS       T05773                                 
Name
(RefSeq) TNF receptor-associated factor 3-like
  KO
K03174  TNF receptor-associated factor 3
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    113685127
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF zf-TRAF_2 Sina_ZnF zf-C3HC4 TRAF3_RING zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-C3HC4_4 CEP135_TSGA10_CC zf-RING_5 zf-RING_6 YjcZ V_ATPase_I ODF2_N DUF7906 DUF948
Other DBs
NCBI-GeneID: 113685127
NCBI-ProteinID: XP_027058408
LinkDB
Position
Unknown
AA seq 547 aa
MEIVPSDVEFVRQLEERYKCISCDNVLKDPAQSSCGHRFCWSCLEDIFKREPNDPKCPDD
KEPLQWNLIFRDKYAQKEILSLECFCPKKSLGCPWCGKLAKLQAHLAECSFSEVKCIYSH
LGCTVVILRYQLAKHVENDCLYKVVECPYCQDGYPGIKMREHLEDCKKFPVKCSYGCDRS
DIPREDLKEHSKLCPRAPVPCNFSFVGCTFHDCRDSLEEHLHSHATEHLSLVAKNNEKTQ
AEMKIFQEQLKASQELIKTYEARLALQSEALALNKQTLSTHQVKLARVEENVDSQRKNMD
ELRKSVEALVQEKESKHASEEVMRRINFQDERLALLAEEVARFGATGSRTQPGNLESGRD
DHRFGNVEHSIALHEIKLADQDLKLQIMETTCYDGCFLWKIDNYQRRFRESVEGRTISIY
SPPFYTSRYGYKLCARAYLNGDGPMGKGKYLSLFIVLMRGEYDALLTWPFQHKVTMKLMD
QERLSHITETFRPDPNSSSFQRPRSEMNIASGCPLFCSHSLLRTRGYVRDDTMFIKIIVE
GNGMPMM
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggaaatagtgccatctgatgttgaatttgtcagacaactcgaagaacgttataagtgt
ataagttgtgataatgtcttgaaagatcctgctcagtcgtcttgtggacacaggttctgt
tggtcgtgcttggaggatattttcaagagggaaccaaacgacccaaaatgtccagacgat
aaagagcccctacaatggaatttgatattcagggacaaatacgcacaaaaagaaatcctt
tcattggaatgcttttgcccgaagaaatcgctcggttgtccatggtgtgggaagttggct
aaattacaagctcacctggccgagtgttctttttcggaagtgaaatgcatttacagtcat
ctggggtgtactgtggttattttgcgataccaattagctaaacatgtcgaaaatgattgt
ctgtacaaggtcgtggagtgcccttattgccaggatggatacccagggattaaaatgagg
gaacatttagaggattgtaagaagttcccggtgaaatgttcctatggctgcgataggagt
gacattcccagggaagaccttaaagaacactccaaattatgcccccgagctcctgtgccg
tgtaacttcagtttcgtaggctgcacttttcacgactgtagggattctttagaagaacat
ctccactctcatgccacggagcacttgagtctcgtggccaaaaacaacgagaaaacacaa
gcggaaatgaaaatctttcaagaacagctgaaagcctcccaggagttaatcaaaacttac
gaggcgcgcttagcattacaatcggaagccctggctttgaataaacagacactctctacg
catcaagtcaagctcgcaagagttgaagagaatgtggattctcagaggaaaaacatggat
gaacttcgcaaaagcgtcgaagcattggtccaggaaaaagaaagcaagcatgctagtgaa
gaagtaatgaggcgtataaatttccaagacgaaagattggcgctactagcggaagaggta
gcaaggtttggtgccacgggatcacgcacacaaccagggaacttagaatccggcagggat
gatcatcgatttggaaatgtggaacactccatagctttgcacgaaataaaactagccgac
caagaccttaaactacagataatggagaccacgtgctacgatggctgtttcctatggaag
attgacaactatcagcgcagatttcgggaatccgtggaggggaggacaatctccatatac
agcccgccattttatacttcgcgctacggatacaagctttgcgcacgcgcttacctcaac
ggcgatgggccaatggggaaaggaaagtacctatccctctttatcgtcttaatgagggga
gagtatgatgctctgttaacgtggccgtttcagcataaagtcactatgaagctgatggat
caagagcgtctatcgcacattaccgagacattccgaccggatccaaacagctcgagcttt
cagcgaccgcgttcggagatgaacatcgcctccggctgccctcttttttgttctcatagc
ctgttaagaaccagaggatatgttcgagatgacactatgtttatcaaaatcatagtggaa
ggcaatgggatgccaatgatgtga

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