Pocillopora damicornis (lace coral): 113685795
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Entry
113685795 CDS
T05773
Name
(RefSeq) guanine nucleotide exchange protein smcr8a-like
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113685795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113685795
Membrane trafficking [BR:
pdam04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
113685795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
113685795
NCBI-ProteinID:
XP_027059154
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MHGAYERTWSGDTQGVMSGMARGLNLDKIAFNFRYSSDNVARSNPWPRTLLSGDFILIAE
FAENEGPKPVMTIPKNAGENFDVNAFAVHVMSVDYTQSRGSNFSIVEDTQLFLTERKDGI
YAYVHHFTLYDIHARGFVRPYCMCYISHCKRKMFSFLDSFMDEFTKVSKLFRHGNRITFL
RDLEERLCDVLELKEKSILENSFSSCLLGQKWKVTQMTGKSEKKLNAEYELILTETKKLI
EVLRPHIVNDPRVEHQFKRLEDLVQGRTRSFTVADGCLEVRHEFSDHKLPTHKPTLRKAV
SLPDIKYLLKGYKELNLKPRSCLPTYLNSMKQLRHLHDLCEWGAKEGLSRLRRVFKHYNR
ETAALLIEKTETSHLDRFPALLTIGRSVVSNVLRNIDMKCVDSCTTSRSPIDTPSQECLT
RKSSCGSLESMHSLDSFQSCVEDEFEGSSKSSDGILSPFTPSSSFHADLQGGERNEIFSN
STSESLLADDSDVMSTHSDTTLTRATVETVSLADYALMGEEFLSNLSGSPLSRPASGTTE
TNVGMHFSQLRGKSLSLESLATSPDSKGGHQRKRKKLDLPVLQIQNSPSPPKTERVPIVN
TPNVPFRNANVKSNLFGKNSVRRVKSLDTPRTSLCSGEEKVLQKRSRYNTRPEMIRLRCF
AEEVSQPLASYTGSNLLSLRNNLSFCIHLLYALLCGRPVVVFAEPKNEREARIVISALWM
FVPENMSHGKVVDPWRTKPLQIADLAWLKLVGLAKSKHFNMIPKSVKRFVSVLDLETDRI
VTPQYKGCYIRPMCNINNMWPSNAALVAFVHSVFLELANKAYVYYFAYCLGGLQWCCCKS
NQQSQSGQAIADVDGPGVLSRLRVHFSDAKIVQYFTELIKQQQIDYFNNLSADQDFVGEI
TLTPESDSASERRSLLICTDPSKCIILRNSKPQEST
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtgcctatgaaagaacgtggagtggtgatacccaaggtgtaatgtcaggaatg
gcaagggggttgaatctggataagattgcatttaattttcgctactcaagcgacaacgtt
gcacgttcgaacccttggccaagaacacttctgagcggagatttcattttgattgctgag
ttcgccgagaatgagggaccaaagccagtaatgacaattcccaagaatgctggagaaaat
tttgacgtgaatgcctttgctgttcatgtaatgtcagtagattatactcaatccaggggc
agcaacttttccattgttgaagacactcagctgtttttaacagagagaaaagatggaatt
tatgcctatgttcaccattttactctttatgatattcatgctcgtggttttgtaaggccc
tactgcatgtgctacatttcacattgcaaaagaaaaatgttttcttttcttgacagtttc
atggatgaatttaccaaggtgtccaagttatttaggcatggtaacagaataacgttccta
agagacctagaagaacgattgtgtgatgttttagagttaaaggaaaaaagtatcttggaa
aattccttctccagttgtcttcttggtcagaaatggaaggttacccaaatgactggaaaa
tcagagaagaagttgaatgctgaatatgagttgatattgactgagaccaaaaagttgata
gaagtcctaagaccacatatagtgaatgaccccagggttgaacatcaatttaaaaggctt
gaagacttggtccaaggaaggactcgtagtttcactgttgctgatggttgtcttgaagta
agacatgaatttagtgatcacaaattgccaacccacaagcctacattacgaaaagctgtc
tcactcccagatatcaaatatctcctgaaaggatacaaagaactgaacctaaagcctagg
tcctgtttgcccacttatcttaatagtatgaaacagttacgacatttacatgacctgtgt
gagtggggagcaaaagaaggactcagcagacttcgacgtgtttttaagcattacaacaga
gaaactgccgcactgttaattgaaaagacggaaacaagccatcttgatcgctttcccgct
cttctgaccattggccgcagtgtagtatctaacgttcttcgaaacatcgacatgaagtgt
gtggacagctgcaccaccagtcgctcccccatagatactccaagtcaagagtgtcttaca
agaaagtcgtcgtgtggtagcttagaaagtatgcacagcctggattcttttcagtcctgt
gtcgaggacgagttcgaaggatcctcgaagtcaagtgatggaatcctttcaccatttaca
ccatcctcttcattccatgctgatttgcaaggaggagaaagaaatgaaattttcagtaac
agtacctctgaatctcttcttgcggatgacagtgacgtgatgtccactcattcggataca
actctcacgagagcgaccgttgagactgtgtctctggcggattacgctttaatgggcgaa
gagtttctgtcaaatctgagtgggtctcctctcagtagaccagcaagtggtaccactgaa
acaaacgttgggatgcatttcagtcaactcagaggaaagagtttaagtttagagagtttg
gcgacgtcgccggattcaaagggtggccaccagagaaaaaggaaaaaactggatttaccg
gttttgcagattcaaaattcaccatcgccgccgaaaactgagagggttccgattgtcaac
accccgaatgttcccttcagaaatgcaaatgtgaaaagtaacttgtttggaaagaattcg
gttaggagagttaaaagcttggataccccacgaacgtccttgtgcagtggagaagaaaaa
gtgcttcaaaaaagatcgcgttataacacaagacccgaaatgattcgactcaggtgtttt
gcagaagaagtttcccagccgctagcatcgtacacaggttctaacttgttatccttgcga
aacaacttgagtttttgtattcacttgctgtacgctcttctttgtggacgaccagtggtg
gtctttgccgaaccgaagaacgaaagggaagcgcgaattgtcatctctgctttgtggatg
tttgtaccagaaaatatgagtcatggaaaggtcgtggatccttggcggaccaaaccttta
cagattgctgaccttgcatggttaaaacttgttggcctcgcaaagagtaagcatttcaac
atgattcccaaatctgtgaagaggtttgtttctgttctcgaccttgaaacagatcgtatt
gttacaccgcagtataagggatgttatattcgtccaatgtgcaatattaacaacatgtgg
ccatcaaatgcagcgttagtggcatttgtccatagcgtcttcttggagttagcgaacaag
gcttacgtatattactttgcttattgcctcggaggactccagtggtgttgctgcaagagc
aatcagcagtcacagtctggacaggcgatcgctgatgtggatggtcctggggtgctgagc
agacttagagtacatttttcagacgccaaaatagttcagtatttcactgaactcatcaag
caacaacagattgattactttaataatctttcagcggatcaagattttgtcggagagata
acacttactccagaatcagattctgcttcggagaggagatcattactgatctgcactgat
ccgtctaagtgtattatattacgtaattcgaagccccaggagtccacatga
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