Pseudomonas danubii: PFZ56_28985
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Entry
PFZ56_28985 CDS
T11866
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pdan Pseudomonas danubii
Pathway
pdan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFZ56_28985 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdan03400
]
PFZ56_28985 (nth)
Enzymes [BR:
pdan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PFZ56_28985 (nth)
DNA repair and recombination proteins [BR:
pdan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFZ56_28985 (nth)
Prokaryotic type
PFZ56_28985 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
HHH_8
DUF2400
Motif
Other DBs
NCBI-ProteinID:
XHY65182
LinkDB
All DBs
Position
6481149..6481787
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVANT
PAAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRLLVERHNSEVPQTREELEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGLAPGKNVVEVEKKLLKFVPKEFLLDSHHWLI
LHGRYVCLARKPRCGSCRIEDLCEYKQKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgccaaacgcctggaaatatttcgccgacttcacgaagacaaccccgaacca
aaaaccgaactggcctactcctcgccgttcgagttgctgatcgcggtgattctttcggcg
caatcgaccgacgtcggggtcaacaaggcgaccgccaaactcttccccgtggccaataca
ccggcagctatccatgcactgggggtcgagggcctgtccgaatacatcaagaccattggc
ctgtacaacagcaaggccaagaacgtcatcgagacctgccgcctgctggtggaacgccac
aacagtgaagtgccacagacccgggaggagctggaagccttgcccggcgtcggccgcaag
accgccaatgtggtcctcaacaccgctttccggcaattgaccatggccgtggacacccac
atcttccgggtcagcaaccgcaccgggctggccccgggcaagaatgtagtagaagtggaa
aaaaaactgctgaagtttgtacccaaggagtttctgctggactcccatcactggctgatc
cttcacggtcgctacgtctgcctggcccgtaagccacgttgcggtagctgtcgaatcgaa
gacctgtgcgagtacaagcaaaagacttctgacgattga
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integrated database retrieval system
