KEGG   Paracoccus denitrificans: Pden_1935
Entry
Pden_1935         CDS       T00440                                 
Name
(GenBank) methionine synthase (B12-dependent)
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
pde  Paracoccus denitrificans
Pathway
pde00270  Cysteine and methionine metabolism
pde00450  Selenocompound metabolism
pde00670  One carbon pool by folate
pde01100  Metabolic pathways
pde01110  Biosynthesis of secondary metabolites
pde01230  Biosynthesis of amino acids
pde04980  Cobalamin transport and metabolism
pde04981  Folate transport and metabolism
Module
pde_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:pde00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Pden_1935
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    Pden_1935
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Pden_1935
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    Pden_1935
   04980 Cobalamin transport and metabolism
    Pden_1935
Enzymes [BR:pde01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     Pden_1935
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding DUF1129
Other DBs
NCBI-ProteinID: ABL70028
UniProt: A1B3D4
LinkDB
Position
1:complement(1931703..1935455)
AA seq 1250 aa
MILPLSPVFDAMRAAARDRILILDGAMGTQIQQLGLSETDFAGHGTGCACGCHPPAPGEH
PQQGNNDLLNLTQPKAIEEIHYRYAKAGADIVETNTFSSTTIAQADYGMEAAVYDLNFHG
ARIARQALDRATAEDGRPRWVAGALGPTNRTASISPDVNNPGYRAVTFDDLRIAYAEQIR
GLIDGGADLILIETIFDTLNAKAAIFACEEVFQDKGQRLPVMISGTITDLSGRTLSGQTP
TAFWYSMRHAAPITVGLNCALGAAAMRPHLAELSTVADTLICAYPNAGLPNEMGQYDETP
EEMAAQVAEFAREGLVNVVGGCCGSTPEHIAAIARAVADLPPRAIPEIEPRLRLSGLEPF
VKTDDIPFVNVGERTNVTGSARFRKLITNGDYAAALDVARDQVENGAQIIDVNMDEGLID
SKQAMIDYLNLIAAEPDIARVPVMIDSSKWEVIEAGLKCVQGKAIVNSISLKEGEEGFLN
QARLCRRYGAAVVVMAFDETGQADTENRKVEICSRAYDLLVNAVGFPPEDIIFDPNIFAV
ATGIEEHDNYGVDFIGATRRITQALPHVHVSGGVSNLSFSFRGNEPVREAMHAVFLYHAI
QAGMDMGIVNAGQLAVYDQIDAGLREACEDVVLNRQPKAGGTATENMLEIAERFRGEGGA
KAREKDLTWRTWPVAKRLEHALVNGITEYIDEDTEEARLSVERPLHVIEGPLMAGMNVVG
DLFGSGKMFLPQVVKSARVMKQAVAHLLPYMEAEKAGSGASSSAGKVLMATVKGDVHDIG
KNIVGVVLACNNYEIIDLGVMVPATKILETAKAENVDIIGLSGLITPSLDEMVHVASEME
REGFDIPLLIGGATTSRVHTAVKIHPRYGRGQAVYVTDASRAVGVVGSLLSGQKNAYVEN
IRSEYMDVANKHARAEADKKRLPLATARDNAVRIDWTGFQAKAPEFLGSRVIEDFDLAEI
ARYIDWTPFFQTWELKGVYPRILDDEKQGEVARQLFADAQAMLTRIIDEQWFKPRAVIGF
WPANRVGDDIRLFTAEDRAAELATLHTLRQQVTKRDGRPNVALADFVAPEGHRDYVGGFV
VTAGGEEQQIADRFKAAHDDFSAILVQALADRFAEALAEMMHERVRRQYWGYADEAFSPE
ELIAEPYAGIRPAPGYPAQPDHTEKVTLFRLLDATAATGVELTESMAMWPGASVSGLYIG
HPDAYYFGVAKVEHDQVLDYADRKGMPVSQVERWLAPILNYTPQAAVAAE
NT seq 3753 nt   +upstreamnt  +downstreamnt
atgatcttgcccctttcccccgtgttcgacgccatgcgcgcggctgcgcgcgaccgtatc
ctgatcctcgacggggcgatggggacgcagatccagcagcttggcctgtccgagacggat
ttcgccggccatggcacgggctgtgcctgcggctgccatccccccgcgccgggcgagcat
ccgcagcagggcaacaacgacctgttgaacctgacccagcccaaggcgatcgaagagatc
cattaccgttatgcgaaggcgggcgcggatatcgtcgagaccaacacattctcgtccacg
accatcgcgcaggccgattacggcatggaggcggcggtctacgacctgaatttccatggc
gcccgtatcgcgcggcaggccctggaccgcgccacggccgaggacggccgcccgcgctgg
gtcgccggggccctggggccgaccaaccgcaccgcctcgatcagtcccgacgtgaacaat
cccggctatcgcgccgtcaccttcgacgatctgcgcatcgcctatgccgagcagatccga
gggctgatcgacggcggcgccgacctgatcctgatcgagacgatcttcgacacgctgaac
gccaaggccgcgatctttgcctgcgaggaggtgttccaggacaagggccagcgcctgccg
gtgatgatctcgggcacgatcaccgacctctcgggccgcacgctttcgggccagacgccg
accgccttctggtattccatgcgccatgccgcgccgatcacggtgggcctgaactgcgcg
ctcggcgccgctgcgatgcgcccgcacctggccgagctttccacggtcgccgatacgctg
atctgcgcctatcccaatgccggcctgcccaacgagatgggccagtatgacgagacgccc
gaagagatggcggcgcaggtcgccgagttcgcccgcgaggggctggtgaacgtggtcggc
ggctgctgcggctcgacgcccgagcatatcgccgccatcgcccgcgccgtggccgatctg
ccgccgcgcgccatccccgagatcgagccgcgcctgcgcctttcggggctggagcccttc
gtcaagaccgacgacattcccttcgtcaacgtgggcgagcggacgaacgtcaccggctcg
gccagattccgcaagctcatcaccaacggcgattacgccgcggcgctggatgtggcccgc
gaccaggtggaaaacggcgcccagatcatcgacgtcaacatggacgaggggctgatcgat
tcgaagcaggcgatgattgactacctgaacctgatcgccgccgagcccgacatcgcccgc
gtgccggtcatgatcgacagctccaagtgggaggtgatcgaggccgggctgaaatgcgtc
cagggcaaggccatcgtgaactcgatctcgctcaaggaaggcgaggaaggctttctgaac
caggcccggctctgccgccgttatggcgcggccgtggtggtcatggccttcgacgagacc
ggccaggccgataccgagaaccgcaaggtcgagatctgctcgcgcgcctacgacctcctg
gtgaacgcggtcggctttccgcccgaggacatcatcttcgacccgaacatctttgccgtc
gccaccggcatcgaagagcatgacaattacggcgtcgatttcatcggcgcgacccggcgc
atcacccaggccctgccgcatgtgcatgtctcgggcggggtctcgaacctcagcttcagc
ttccgcggcaacgagccggtgcgcgaggcgatgcatgcggtgttcctctatcacgccatc
caggcggggatggacatgggcatcgtcaacgcgggccagctggcggtctatgaccagatc
gacgccggcctgcgcgaggcttgcgaggacgtggtgctgaaccgccagcccaaggccggc
ggcaccgcgaccgagaacatgcttgagatcgccgagcgtttccgcggcgaaggcggggcc
aaggctcgtgaaaaggatctgacctggcgcacatggccggtcgcgaaacggctggagcat
gccctcgtcaacggcatcaccgagtatatcgacgaggataccgaggaggcgcggctttcc
gtcgagcgcccgctgcatgtgatcgaaggccccttgatggccggcatgaacgtggtcggc
gacctgttcggctcgggcaagatgttcctgccgcaggtggtgaagtcggcccgggtgatg
aagcaggccgtggcgcatcttctgccttacatggaggccgaaaaggccggcagcggcgcc
tcgtccagcgccggcaaggtgctgatggcgacggtcaagggcgatgtccacgacatcggc
aagaacatcgtcggcgtcgtgctggcctgcaacaattacgagatcatcgacctgggcgtg
atggtgcccgcgacgaagatcctggagaccgccaaggccgagaatgtggacatcatcggg
ctttccggcctcatcaccccctcgctggacgagatggtgcacgtcgcctcggaaatggag
cgcgagggcttcgacatcccgctgctgatcggcggcgccacgacctcgcgcgtgcatacg
gcggtcaagatccatccgcgctatggccgcgggcaggcggtctacgtcaccgatgccagc
cgtgccgtgggcgtggtgggcagcctgctttcgggccagaagaacgcctatgtcgagaat
attcgcagcgaatacatggacgtggcgaacaagcacgcccgcgccgaggcggacaagaag
cgcctgccgctggccacggcccgcgacaatgcggtcaggatcgactggaccgggttccag
gccaaggcgcccgagttcctgggttcgcgcgtgatcgaggatttcgacctggccgagatc
gcccgttatatcgactggaccccgttcttccagacctgggaattgaagggcgtctatccg
cgcatcctcgatgatgaaaagcagggcgaggtggcgcggcagctctttgccgacgcgcag
gccatgctcacgcgcatcatcgatgagcaatggttcaagccccgggcggtcatcggcttc
tggccggcgaaccgggtcggcgacgatatccggctgttcaccgccgaggatcgggcggcg
gaactggccaccctgcacacgctgcgccagcaggtgaccaagcgcgacggccgcccgaac
gtggcgctggccgatttcgtggcgcccgaggggcatcgcgactatgtcggcggcttcgtg
gtcacggccggcggcgaggagcagcagatcgccgatcgcttcaaggccgcgcatgacgat
ttctcggccatcctggtgcaggccctggccgaccgtttcgccgaggcgctggccgagatg
atgcatgagcgggttcgcaggcagtactggggctatgcggacgaggctttcagccccgag
gaactgatcgccgagccctatgcgggcatccgcccggcgcccggctatccggcccagccc
gaccataccgaaaaggtgacgctgttccgtctgctggacgccaccgccgccaccggggtc
gagttgaccgagtcgatggcgatgtggcccggcgcctcagtctcgggcctctatatcggc
catcccgatgcctattacttcggtgtcgccaaggtcgagcacgaccaggttctggactat
gccgaccgcaagggcatgccggtgtcgcaggtcgagcgctggctggcgccgatcctgaac
tataccccgcaggcggccgtcgcggccgagtga

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