KEGG   Paracoccus denitrificans: Pden_2873
Entry
Pden_2873         CDS       T00440                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pde  Paracoccus denitrificans
Pathway
pde03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Pden_2873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pde03400]
    Pden_2873
Enzymes [BR:pde01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pden_2873
DNA repair and recombination proteins [BR:pde03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Pden_2873
 Prokaryotic type
     Pden_2873
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH EndIII_4Fe-2S HHH_5
Other DBs
NCBI-ProteinID: ABL70957
UniProt: A1B613
LinkDB
Position
2:complement(40353..41021)
AA seq 222 aa
MARSTFSRLPPALPYATQVAIFSRFREANPHPVTELEYTNAFTLLVAVALSAQATDVGVN
KATKSLFQRVSTPQEMLELGVEALTEQIKTIGLYRQKAKNVIALSRRLVEEYGGEVPQSR
AALMTLPGVGRKTANVVLNSVFDFPAQAVDTHIFRVGNRTRIAPGRDVEEVERAIEDNVP
VPFQQNAHHWLILHGRYICQARRPRCRICPIEDLCPYEEKTE
NT seq 669 nt   +upstreamnt  +downstreamnt
atggcacgcagcaccttttcccgtcttccgcccgccttgccctatgcgacccaggtcgcg
atcttttcgcgtttccgcgaagccaatccgcatccggtgaccgagctggaatacaccaac
gcctttaccctgctggtggcggtggcgctgtcggcgcaggcgaccgatgtcggcgtgaac
aaggcgacgaaatcgctgttccagcgcgtgagcacgccgcaagagatgctggagctgggc
gtcgaggcgctgaccgagcagatcaagaccatcgggctgtaccgccagaaggcaaagaac
gtcatcgcgctgtcgcgccggctggtcgaggaatatggcggcgaggtgccgcaatcgcgc
gccgcgctgatgaccctgcccggtgtcgggcgcaagaccgcgaatgtggtgctgaacagc
gtgttcgactttccggcgcaggcggtggacacgcatatctttcgcgtcggcaaccgcacc
cgcatcgctccgggccgcgacgtcgaggaggtcgagcgcgccatcgaggacaacgtcccg
gtgccgttccagcagaacgcccatcactggctgatcctgcacggccgctatatctgccag
gcccggcggccgcgctgccggatctgccccatcgaagatctctgcccttatgaggagaag
accgaatga

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