Pseudarthrobacter defluvii: JCQ34_07555
Help
Entry
JCQ34_07555 CDS
T09165
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pdel
Pseudarthrobacter defluvii
Pathway
pdel00300
Lysine biosynthesis
pdel00550
Peptidoglycan biosynthesis
pdel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdel00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JCQ34_07555
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JCQ34_07555
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdel01011
]
JCQ34_07555
Enzymes [BR:
pdel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JCQ34_07555
Peptidoglycan biosynthesis and degradation proteins [BR:
pdel01011
]
Precursor biosynthesis
Amino acid ligase
JCQ34_07555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WJH25895
LinkDB
All DBs
Position
1642918..1644549
Genome browser
AA seq
543 aa
AA seq
DB search
MSEFTTPGSDAGRDESPGRFRPAAVAAVPLAAVGQALGVAVPEPAADAEITGISLNSRTV
EPGDLYVALPGATRHGADFASDAIGAGAVAVLTDDAGARLLALSADTPVPVLVVGNPRNE
VGPLSAMIYRSQADDGQPLRLFGVTGTNGKTTTTYFITSLLRALRQKTGLIGTIEILAGG
KPIPSLLTTPESTEVHGLVALMRERGLDAAAMEVSSHAISYQRVDGLLFDVAGFTNLTQD
HLDLHNTMEEYFATKAELFTPGRARRAVVTVDDEWGRRLAGSTRVPVTTLSTDGSNQADW
TMAATAPRGLGTDFTLAGPAGATLKIHTGLPGSFNVANAALAALMVLASGVDLADLQAAL
DSADPFTVAVPGRMQLIAEQPAAVVDFAHNTDALARALEAVRPPQPDSRLIVVFGATGQR
DQGKRPAMGAIAARLADTVIITDDDPHDEDAAAIRSDVMAGAREALDSGSLGAELLEVFP
RDEAIHHAVSLARPQDTILVAGRGHEVWQEVKGVNLALDDRVELRNALTARGFNVLHDDR
IES
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagagttcaccacgcccggcagcgacgctggccgggacgaaagtccaggccgcttc
cggcccgcagccgtagctgccgtcccgctggccgccgtcgggcaggcccttggcgtagcc
gtgcccgaacctgccgctgacgcggagatcaccggcatatcgctcaactcgcgcactgtg
gagcctggcgacctgtacgtggcgctccccggagccaccaggcacggggcggacttcgcc
tccgacgccatcggtgcaggggcagtggccgtcctcaccgacgacgccggggcacggctg
ctcgccctgtccgcggacacaccggtcccggtgctcgtcgtcgggaatccccgcaacgag
gtgggaccgctttccgccatgatttaccgcagccaggccgatgacgggcagccactgcgg
ctgttcggtgtcaccggaaccaacgggaagaccaccaccacctacttcatcacctccctg
ctgcgtgccctgcggcagaagaccggtctgatcggaaccatcgagatcctggccggcggg
aagccgatccccagcctcctgaccacgccggaatccaccgaggtccacgggctcgtggcg
ctcatgcgcgaacgcgggcttgacgccgccgccatggaggtctcctcccacgccatctcc
taccagcgcgtcgacggcctgctcttcgacgtcgcgggtttcaccaacctcacccaggac
cacctggacctgcacaacaccatggaggagtacttcgccaccaaggcggaactcttcacg
cccgggcgcgcgcgccgggcggtggtgacggtcgacgacgagtggggacgccggctggcc
ggcagcacccgggtgccggtcaccacgctcagcacggacggcagcaaccaggcggactgg
acgatggcagcgacggcgccacgggggctgggtaccgacttcacccttgccggtcccgct
ggcgccaccctgaaaatccacacaggtttgcccggaagcttcaacgttgccaacgctgcc
ctggctgcgctgatggtcctcgcctccggcgtggacctggccgacctgcaggccgccctg
gacagtgccgaccccttcacggtggccgtgcccggacgcatgcagctgatcgccgagcag
cccgccgccgtggtggacttcgcccacaacaccgacgccctggcccgggccctggaagca
gtccgcccgccccaaccggactcccggctgatcgtggtgttcggtgccaccggacagcgg
gaccagggcaaacgacccgcaatgggtgccatcgcggcccggcttgccgacaccgtgatc
atcaccgacgacgacccccacgacgaggacgcggcagcgatccgctccgacgtgatggcc
ggggcacgcgaagccctggacagcgggtcattgggggccgagctgctggaggtcttcccc
cgcgacgaagccatccaccacgccgtgtccctggcgcgcccacaggacaccatcctggtg
gccggccgggggcacgaggtctggcaggaagtgaagggcgtcaatctcgccctggacgac
agggtggaactgcgcaacgccttgacagccaggggattcaacgttctccatgacgaccgg
atagagtcctag
DBGET
integrated database retrieval system
