Pseudomonas denitrificans (nom. rej.): F1C79_29600
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Entry
F1C79_29600 CDS
T09478
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden01501
beta-Lactam resistance
pden01503
Cationic antimicrobial peptide (CAMP) resistance
Module
pden_M00718
Multidrug resistance, efflux pump MexAB-OprM
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F1C79_29600
01503 Cationic antimicrobial peptide (CAMP) resistance
F1C79_29600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pden02000
]
F1C79_29600
01504 Antimicrobial resistance genes [BR:
pden01504
]
F1C79_29600
Transporters [BR:
pden02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
F1C79_29600
Antimicrobial resistance genes [BR:
pden01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F1C79_29600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QEY75444
UniProt:
A0A9X7R7E1
LinkDB
All DBs
Position
6340176..6343328
Genome browser
AA seq
1050 aa
AA seq
DB search
MISRFFIERPVFAMVISIVILLAGLVAMRALPIAQYPEIVPPEVSVTASYPGASSQVIAE
TVAAPLEQEINGVEGMIYQLSNSDASGAMSLTVYFEVGTDPDQATIDVNNKVQAALAKLP
EEVRRQGVKVEKKSSDILQVVTLFSPDNSRDPIFISNYALINVIDDLKRIPGVGDVSQFG
SKDYSMRIWLRPDKLAQYNLTPTDVVNAVREQNSQFAAGSFGQQPMKEPQDFTYMATAQG
RFTDPKEFENVILRSDSTGASLLLKDVARVELGAQDYSLVTSLNGQQNAAFGIYLQPGAN
ALDTAEAVRTHMEALAKRFPQGIAFKIPYDTTTFVKVSIEEVIHTFIEALILVMVVVFIF
LQNIRATLIPVLAIPVSLVGTFAGMYLMGFSINLLSLFGMVLAIGIVVDDAIVVLENVER
VMRTEKLSPKEAAIKAMEEVTGPIIAIVLVLCAVFIPVGFLGGLAGQMYKQFAITIAVSV
VISGIVALTLSPALCALILKPEHKEPAAPFRWFNNAFERITNGYGAGVQFFLKRAALGLI
LFGGMIALLVILFGRVPGSLVPDEDQGYVLNAYFLPPAASLSRTEKLTGDVTQELMKHPA
VADVVTFAGFDILTFGTRSNAGVSFVTLKDWKERNTPELDARNLTREFMKMGAGQEDGVV
MSFNPPPITGMSTTGGFEAYIQDRSGGTSEQLEEITTKFLAAAGKRPELAGLNTTFNANV
PQYYVDLDRTKARSLGVAIDDVFTAMQSTFGSYYVNDFTLYGRTWQVSLESEPEFRRKPD
DLSQVFVRSSTGDLVPLTTLVSVKRILGPDSYARFNVFPAAKLLGGPAPGYSSGQALAAM
QEVADQVLGEDYSLAWIGSAYQELATQGSGSTAFIFGLILVFLILAAQYERWTLPLAVVT
AVPFAVFGAILAIWLRGLDNDVYFQVGLVTLIGLAAKNAILIIEFAVLCREEQGMGPVEA
ALEAAKLRFRPIVMTSLAFILGCVPLAISTGAGSASRHSIGTGVIGGMLAATLLATFLIP
MFYMLVESAADKVGGRKAKAKPEPEGAHEA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
gtgatttcgcgcttcttcatcgaacgtccggtgttcgcgatggtgatttccatcgtgatc
ctgctcgcgggcctggtggccatgcgcgcgctgcccatcgcccagtacccggaaatcgtg
ccgccggaagtctccgtgacggcctcctacccgggcgccagctcccaggtcatcgccgaa
accgtggccgctccgctggagcaggaaatcaacggcgtggagggcatgatctaccagctg
tccaactccgacgccagcggcgccatgagcctgaccgtgtacttcgaggtcggcaccgac
cccgaccaggccaccatcgacgtcaacaacaaggtgcaggcggcgctcgccaagctgccc
gaggaagtgcgccggcagggcgtgaaggtggagaagaaatcctccgacatcctgcaggtg
gtgacgctgttttcgccggacaactcccgcgacccgatcttcatcagcaactacgcgctg
atcaacgtgatcgacgacctcaagcggattcccggtgtcggcgacgtcagccagttcggt
tccaaggactattcgatgcgcatctggctgcggccggacaagctggcgcagtacaacctc
acgcctaccgacgtggtgaacgcggtgcgcgagcagaactcgcagttcgccgccggcagc
ttcggccagcagccgatgaaggagccgcaggacttcacctacatggccacagcgcagggg
cgcttcaccgatccgaaggagttcgagaacgtcatcctgcgcagtgattcgactggcgcc
agcctgctgctcaaggacgtggcgcgggtcgagctgggcgcgcaggactactccctggtt
acctcgctcaacggccagcagaacgctgccttcggtatctacctgcaaccgggcgccaac
gccctggacaccgccgaggccgtgcgtacccacatggaagcgctggccaagcgtttcccg
cagggcatcgccttcaagattccctacgacaccactaccttcgtgaaggtgtccatcgag
gaggtgatccataccttcatcgaggcgctgatcctggtgatggtggtggtgttcatcttc
ctgcagaacatccgcgccacgctgatcccggtgctggcgatcccggtgtcgctggtcggc
accttcgccggcatgtacctgatgggcttctccatcaacctgttgtcgctgttcggcatg
gtgctggcgatcggcatcgtggtggacgacgccatcgtggtactggagaacgtcgagcgg
gtaatgcgcaccgagaagctcagcccgaaagaggcggcgatcaaggccatggaggaagtg
accgggccgatcatcgccatcgtgctggtgctctgcgcggtattcatcccggtcggcttc
ctcggcggtctggcgggccagatgtacaagcagttcgcgatcaccatcgccgtgtcggtg
gtgatctccggcatcgtcgcgctgacgctctctcctgcgctctgcgcgctgatcctcaag
cccgagcacaaggagccggctgcaccattccgctggttcaacaacgccttcgaacgcatc
accaacggctacggcgccggggtgcagttcttcctcaagcgggcagctcttggcctgata
ttgttcggcggcatgatcgcgctgctggtcatcctgttcggccgggtgcccggctcgctg
gtgcctgacgaagaccagggctacgtgctcaacgcctacttcctgccgccggcggcttcg
ctgagccgtaccgagaagctcaccggcgacgtgacccaggaactgatgaagcatccggcc
gtggctgacgtggtgaccttcgccggtttcgacatcctcaccttcggcacccgcagcaac
gccggggtgtccttcgtcaccctgaaggactggaaggagcgcaacacgcccgagctggac
gcacgcaacctgacccgcgagttcatgaagatgggggcgggccaggaagacggcgtggtg
atgtccttcaacccgccgccgatcaccggcatgagtaccaccggcggcttcgaggcctac
atccaggaccgcagcggcggcacctccgagcagctcgaggagatcaccaccaagttcctt
gcagcggccggcaagcgccctgaactggcggggctgaacaccaccttcaacgccaacgtg
ccgcagtactacgtcgacctggaccgtaccaaggcgcgttccctgggtgtggccatcgac
gacgtgttcacggccatgcagtccaccttcggcagctactacgtcaacgacttcaccctc
tacgggcggacctggcaggtctccctggagtcggagccggagttccgccgcaagccggac
gacctcagccaggtcttcgtccgctcgtccaccggcgatctggtgccgctgaccacgctg
gtctcggtcaagcgcatcctcggcccggactcctacgcgcgcttcaacgtgttcccggcg
gccaagctgctcggcggcccggcgcccggctacagctccggccaggcgctggcggccatg
caggaagtggccgaccaggtgctgggcgaggactactcgctggcctggatcggctcggcc
taccaggaactggcgacccagggttcgggcagcaccgcgttcatcttcggcctgatcctg
gtgttcctcatcctcgccgcccagtacgaacgctggaccctgccgctggcggtggtcact
gcggtgcccttcgcggtgttcggtgcgatcctggcgatctggctgcgtgggctggataac
gacgtgtacttccaggtcggcctggtgaccctgatcggcctggcggcgaagaatgccatc
ctgatcatcgagttcgccgtgctgtgccgcgaggagcagggcatgggcccggtcgaggcg
gcgctggaggcggccaagctgcgcttccgccccatcgtgatgacctcgctggccttcatc
ctgggttgcgtgccgctggccatcagcactggcgccggttccgcgagccgccattccatc
ggcaccggggtgatcggcgggatgctcgccgcgaccctgctggcgaccttcctcatcccg
atgttctacatgctggtggagtcggccgcggacaaggtcggcggccgcaaggccaaggcc
aagcccgagccagagggcgcgcacgaagcctga
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