Pseudomonas denitrificans (nom. rej.): F1C79_30825
Help
Entry
F1C79_30825 CDS
T09478
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden00300
Lysine biosynthesis
pden00550
Peptidoglycan biosynthesis
pden01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F1C79_30825
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F1C79_30825
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pden01011
]
F1C79_30825
Enzymes [BR:
pden01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
F1C79_30825
Peptidoglycan biosynthesis and degradation proteins [BR:
pden01011
]
Precursor biosynthesis
Amino acid ligase
F1C79_30825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
IU_nuc_hydro
Motif
Other DBs
NCBI-ProteinID:
QEY75665
UniProt:
A0A9X7N905
LinkDB
All DBs
Position
6620676..6622139
Genome browser
AA seq
487 aa
AA seq
DB search
MPMSLNQLLPQAESGELIRELTLDSRTVKPGDLFLAVPGGRQDGRGHIAAALTQGAAAVA
YEAEGAVDLPPSDVPMIAIKGLAKQLSAIAGRFYGEPSRGVELVGVTGTNGKTSVSQLVA
QALDLLGERCGIVGTLGTGFYGALESGRHTTPDPLAVQATLARLKQAGAKAVAMEVSSHG
LEQGRVAALGFDVAVFTNLSRDHLDYHGSMEAYGAAKAKLFAWQGLRCRVINLDDDFGRQ
LAAESQESRLMGYSLSDPSAYIYCREATFSDAGVQAQIVTPQGEGLLRSSLLGKFNLSNL
LAVVGALLGLDYPLGDVLKVLPQLEGPIGRMQRLGGGEKPLVVVDYAHTPDALEKVLLAL
RPHVHGQLLCLFGCGGDRDSGKRPIMAQIAEQHADRVLVTDDNPRTEKSEAIIADIRAGF
AKPEAVEFVPGRGEAIARLIAAAGVDDVVLLAGKGHEDYQEIDGVRHPFSDLEQAAKALA
AWEVKRA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgagcctgaatcaactgctgccgcaagccgaaagtggcgaactgatccgtgag
ctgaccctggacagccgcaccgtcaagccgggcgacctgttcctggctgtgccgggtggc
cgtcaggatggccgcgggcacattgccgccgcgctcacccagggagcggccgctgttgcc
tatgaagcagagggtgctgtagacctgccacccagcgatgtgccgatgattgccatcaag
ggcctcgccaagcagctgtccgctatcgccgggcgcttctacggcgaacccagccgtggc
gtcgaactggtcggcgtgaccggcaccaacggcaagaccagcgtcagccaactggtggcc
caggcgctggacctgctcggcgaacgctgcggcatcgtcggcaccctcggcaccggtttc
tatggcgcgctggaaagcggtcgccacaccacgcctgacccgcttgccgtgcaggcgacc
ctggcacgcctgaaacaggctggcgccaaggccgttgccatggaagtgtcctcccacggc
ctggaacagggccgcgttgcggcgctgggcttcgatgtggcggtgttcaccaacctgtcc
cgcgaccatctggactaccacggctcgatggaagcctacggcgccgccaaggccaagctg
ttcgcctggcaaggcctgcgttgccgggttatcaacctggacgacgacttcggtcgccag
ctggctgccgagtcccaagaatcccgcctgatgggttacagcctgagcgacccgtcggcc
tacatctattgccgcgaagccaccttcagcgatgccggcgtgcaagcgcagatcgtcacc
ccgcagggcgaaggcctcctgcgcagctcgctgctgggcaagttcaacctgagcaacctg
ctggccgtggtcggcgcgctgctgggcctggactacccgctgggcgacgtgctcaaggtg
ctgccgcagctggaaggtccgatcggtcgcatgcagcgcctgggcggcggtgaaaagccg
ctggtggtcgtggactacgcccacaccccggacgcgctggagaaagtcctgctggccctg
cgtccgcacgtacatggccagctgctttgcctgttcggctgcggcggcgaccgtgacagc
ggcaagcgcccgatcatggcgcagatcgccgaacagcatgccgaccgcgtgctggttacc
gatgacaacccgcgcaccgagaagagcgaggcgatcatcgccgacatccgtgccggtttc
gccaagcccgaagcggtcgagttcgtgcccggccgcggcgaagccatcgctcgcctgatc
gccgctgcgggcgtcgatgacgtcgtgctgctggccggcaaggggcatgaggattaccag
gagatcgacggtgttcgccacccgttctccgatctggaacaagccgccaaggcgctggct
gcctgggaggtgaagcgtgcttaa
DBGET
integrated database retrieval system
