Pseudomonas defluvii: QEP73_00355
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Entry
QEP73_00355 CDS
T10501
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pdeu Pseudomonas defluvii
Pathway
pdeu01501
beta-Lactam resistance
pdeu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pdeu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QEP73_00355
01503 Cationic antimicrobial peptide (CAMP) resistance
QEP73_00355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdeu03036
]
QEP73_00355
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdeu02000
]
QEP73_00355
01504 Antimicrobial resistance genes [BR:
pdeu01504
]
QEP73_00355
Chromosome and associated proteins [BR:
pdeu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
QEP73_00355
Transporters [BR:
pdeu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QEP73_00355
Antimicrobial resistance genes [BR:
pdeu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QEP73_00355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_RND
BSH_RND
HH_MFP_RND
BSH_CzcB
RND-MFP_C
YknX_C
Biotin_lipoyl
BSH_YknX
BSH_LcnD
BSH_CusB
CzcB_C
Med12-PQL
Motif
Other DBs
NCBI-ProteinID:
WJM96625
LinkDB
All DBs
Position
78122..79273
Genome browser
AA seq
383 aa
AA seq
DB search
MLRRRMLIMLGVVLLIVLILGGYKAFSIYQQIQQFSAPRPPVSVAATAAREQLWQSRLPA
VGSLKAFQGVNLSLETAGTVKTLLFESGQRIRVGQPLLQLDSDVESALLGTAMADLGLAQ
VEYGRGSQLIDSQAISKGEFDRLAAQLLRSKAVVAQLKGSLAKKTILAPFSGTIGIRQVD
IGDYLPSGTVIATLQDLSSLYADFYVAEQAFPKLGIGQQVLVSVAAYPNQTFPGAISAIN
PKVEDSTRNVQVRATLANPDGKLLPGMFTSLQILLPNPRTEVVVPETAVTYTLYGTSVYV
AVPKTAEDGQPQKTPDGQPVWVAERRFIEAGERREGLVVIAKGVKAGEQVVTAGQLKLSQ
GALITVSPDKTLTGEPDTSPRVD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccgcatgctgatcatgttgggtgtcgtgttgctgattgtgctgattctg
ggaggctacaaagccttcagtatctatcagcaaattcagcaattcagcgcgccaagacct
cccgtgagcgtggcggcgactgccgcgcgcgaacagctctggcagagtcggctgcccgca
gttggcagcctcaaggcgtttcagggggtcaatctgagcctggagaccgccggtacggtc
aagaccctgctgttcgagtcaggccagcggatcagagtaggccagcccctcttgcagctc
gacagcgacgtggaaagcgccttgctgggtaccgcgatggcggacctcgggctggcgcag
gtcgagtatggacgcggcagccaactgatcgacagtcaggcaatctccaaaggcgagttc
gatcgcctcgcagcacaactgctgcgcagcaaagccgtggttgcccaactcaaaggttcc
ttggcgaaaaagacgatccttgcgccgttcagcggtaccattggtatccgccaggtcgat
atcggcgactacctgcccagtggcacagtgatcgccacccttcaggacctgagcagcctg
tacgcggacttttacgtggccgaacaggcgtttcccaaactgggcatcggccagcaagta
ctggtcagcgttgcagcctaccccaaccagacgttccctggcgccatcagcgctatcaac
cccaaggttgaagacagcacccgtaatgtacaggtccgcgccaccctggcgaaccccgat
ggcaagctgttacccggcatgttcaccagcctgcaaatactgctgcccaacccgcgcacg
gaagtggtcgtccctgagactgcggtcacctacaccctgtatggcacctcggtgtacgtc
gcagtgcccaagaccgccgaggacggccagccacaaaagactcctgacggccaaccggtg
tgggtggcagagcgccgtttcattgaagccggcgagcgccgtgaaggcctggtggtcatc
gccaaaggcgttaaggcaggtgaacaggttgtaacggccggtcagctgaaactcagccaa
ggcgccctgatcaccgtcagcccggacaagaccctgacgggcgagccggacacctcgcca
cgcgtcgattga
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