Clostridioides difficile 630Derm: CD630DERM_16270
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Entry
CD630DERM_16270 CDS
T03785
Symbol
vanY
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase(penicillin-binding protein)
KO
K18866
zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:
3.4.13.22
3.4.17.14
]
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf00550
Peptidoglycan biosynthesis
pdf01100
Metabolic pathways
pdf01502
Vancomycin resistance
pdf02020
Two-component system
Module
pdf_M00652
Vancomycin resistance, D-Ala-D-Ser type
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CD630DERM_16270 (vanY)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CD630DERM_16270 (vanY)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CD630DERM_16270 (vanY)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdf01002
]
CD630DERM_16270 (vanY)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdf01011
]
CD630DERM_16270 (vanY)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pdf01504
]
CD630DERM_16270 (vanY)
Enzymes [BR:
pdf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
CD630DERM_16270 (vanY)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
CD630DERM_16270 (vanY)
Peptidases and inhibitors [BR:
pdf01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
CD630DERM_16270 (vanY)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdf01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
CD630DERM_16270 (vanY)
Antimicrobial resistance genes [BR:
pdf01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CD630DERM_16270 (vanY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Motif
Other DBs
NCBI-ProteinID:
CEJ98219
UniProt:
A0A060PHX4
LinkDB
All DBs
Position
1:1890399..1891205
Genome browser
AA seq
268 aa
AA seq
DB search
MMNNILLDKNKEDKMTNTILLTKDKVYDGNLILVNAFLPVKTSEDIDLIPVDTRFPSILM
KREATNILQNILKSICGINEIVPVSGYRTAEEQQDIYSSSLRDNGKDFTKKFVALPNHSE
HQTGLAIDLGLKKEVIDFICPEFPYNGICNEFRKAALHYGFIERYQCKKEEITGISQEPW
HFRYVGYPHSEIINKMNLALEEYIEYIKRFSYTNCLKIEDKEKIIEIFYVPIHTKEEVRI
SIPEQCVYQISGNNKDGFIVTFWRNRKD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataatattttattagataaaaataaagaagataaaatgacaaatactatctta
ttgactaaagataaagtttatgatgggaatctaattctagtaaatgcttttttaccagtt
aaaacatctgaagatatagatttaattcctgtagatacaaggtttccaagtattcttatg
aaacgtgaagctacaaacattttacaaaatattttaaaaagtatatgtggaataaatgaa
atagtacctgtaagtggatatcgtactgcagaagaacaacaagatatatattcaagttct
ctgcgtgacaatggaaaagactttactaaaaagtttgtagcacttccaaatcacagtgaa
catcagacagggcttgctattgatttagggttaaagaaagaagttatagattttatctgc
cctgaatttccttataatggtatttgtaatgagtttcgtaaggcagcactacattatggt
tttatagagcgttatcagtgtaaaaaagaagaaataacaggaatatctcaagaaccatgg
cattttcgttatgtgggatatccgcattctgagattatcaataaaatgaatctcgctctt
gaagaatatatagaatatattaagagattttcgtatacaaattgtttaaaaatagaagat
aaagaaaaaattatagaaatcttttatgtgcctattcatactaaagaagaagtgagaatc
tctatacctgaacaatgtgtatatcaaatatcgggtaacaataaggatggttttattgtg
acattttggagaaatagaaaggactaa
DBGET
integrated database retrieval system
