Phyllostomus discolor (pale spear-nosed bat): 114511471
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Entry
114511471 CDS
T07739
Symbol
DDX58
Name
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic04064
NF-kappa B signaling pathway
pdic04622
RIG-I-like receptor signaling pathway
pdic04623
Cytosolic DNA-sensing pathway
pdic05160
Hepatitis C
pdic05161
Hepatitis B
pdic05162
Measles
pdic05164
Influenza A
pdic05168
Herpes simplex virus 1 infection
pdic05169
Epstein-Barr virus infection
pdic05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
114511471 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
114511471 (DDX58)
04623 Cytosolic DNA-sensing pathway
114511471 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
114511471 (DDX58)
05160 Hepatitis C
114511471 (DDX58)
05171 Coronavirus disease - COVID-19
114511471 (DDX58)
05164 Influenza A
114511471 (DDX58)
05162 Measles
114511471 (DDX58)
05168 Herpes simplex virus 1 infection
114511471 (DDX58)
05169 Epstein-Barr virus infection
114511471 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pdic04054
]
114511471 (DDX58)
Enzymes [BR:
pdic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114511471 (DDX58)
Pattern recognition receptors [BR:
pdic04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
114511471 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_22
AAA_25
AAA_24
AAA_19
MC7
Motif
Other DBs
NCBI-GeneID:
114511471
NCBI-ProteinID:
XP_028385969
EnsemblRapid:
ENSPDIG00005003251
UniProt:
A0A6J2N297
LinkDB
All DBs
Position
3:complement(181404699..181450124)
Genome browser
AA seq
928 aa
AA seq
DB search
MTAEERRNLHAFRDYVTKILDPTYILSYMAPWFKEDEMQYIQAEKSNKGVMEAASLFLKF
LLELQEEGWFRAFLDALHHAGYSGLYEAIESWDFQKIEKLEEYRLLLRRLQPEFKTRINP
NDILPEISKCLINQECEEIIQICSNKGPMAGAEKMVECLLRSDKENWPKSLTLALEKEES
NFRELWITEKGAKEKTKDLEDEEAETSEVQIFYKEEPECQDLSQNSCPPSEVSLAHSPLK
PRHYQLELASPAIHGKNTIICAPTGCGKTFVALLICEHHLKNFPQGQKGKVVFFANQLPV
YEQQKSVFLNYFERLGYRVSGISGLTFENISVEQIIEDSDIIILTPQILVNSLKDGTVPS
LSVFTLMIFDECHNTNKRHPYNMIMFSYLDQKLGGSSDPLPQVIGLTASVGVGDAKNTRE
AMEYICKLCASLDTSVLATVKDNLEELEEVVYKPHKLFRKVESRSTNRFENIISQLMKKT
ESLVKSVFDELGTISLESLSQIRNRRFGTQKYEQWIVDVQKKCTVLQLPDKERESRVCKA
LFLYTSHLRKFNDALIINEHARTKDALDYLKDFFRNVRASGFDEIEQDLTRRFEEKLQEL
ESISMDPSNENPKLRDLCYVLQEEYHLNPETRTILFVKTRALVDALKKWIEEHSTLSFLK
PGILTGRGKTNQNIGMTLPAQKCVLDAFRTHGDNKILIATSVADEGIDIAQCNLVILYEY
VGNVIRMIQTRGRGRARGSKCFLLTSNADVIEKEKMNMYKEKMMNTSILSLQTWDEAAFK
EKIRQIQIHEKLIRDNQGKIEPVLDKENKKLLCRKCKAFACYTADIRVIEECHYTVVGDA
FRECFVTRSHPRPKNFGIFEKKAKIFCGRQDCSHDWGICVRYKTFDIPLIKIESFVVEDV
ATGAQRLYAKWRDFHFEKLPFNAAEMSK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgaggagcggcggaatctgcacgccttccgagactatgtcacgaagattctg
gaccctacttacatcctgagctacatggcgccctggtttaaggaggatgagatgcagtat
attcaggccgagaaaagcaacaagggcgtgatggaggctgcctcgctttttctcaagttc
ctcctggagctgcaggaggaaggctggttccgtgcctttctggatgctcttcaccatgca
ggttattctggactttatgaagctattgaaagttgggatttccaaaaaattgaaaagttg
gaggaatatagattgctattaaggcgtttgcaaccagaatttaaaaccagaattaaccca
aatgatattcttcctgaaatatctaaatgtttaatcaatcaggaatgtgaagaaattata
cagatttgttccaacaaggggccaatggcaggtgcagagaaaatggttgagtgccttctc
agatcagacaaggagaactggcccaagtctctgacacttgctttggagaaagaagagagc
aatttcagagaactgtggattacagagaaaggtgcgaaagagaaaacgaaagatcttgag
gatgaggaagcagaaacttccgaagtgcagattttctacaaggaagaaccggaatgccag
gatcttagtcagaattcatgcccaccttcagaagtgtcccttgctcacagccctctgaag
ccaagacattaccaactggagctggcttctcctgctatacacggaaaaaacacaataata
tgtgctcctaccggttgtggaaaaacctttgttgcacttcttatatgtgaacatcatctt
aaaaattttccacaaggacaaaaggggaaggttgtgttttttgctaatcaactcccagtg
tatgaacagcaaaaatctgtgttcttaaactattttgaaagacttgggtacagagtttca
ggcatatctggattaacatttgagaatatctcagtggaacagattattgaggacagtgac
atcatcattttaactccacagattcttgtgaacagccttaaagatgggactgtcccatca
ctctctgtcttcactttgatgatatttgatgaatgccacaacaccaataagcgccatcct
tacaatatgatcatgttcagttatctagatcagaaacttggaggatcttcggacccactg
ccccaggtcattgggctgaccgcctcagttggtgttggggatgccaagaacacaagggaa
gccatggagtatatctgcaagctgtgtgcttctttggacacatcagtgctagcaacagtc
aaggacaacctggaggaactggaggaagttgtatataagccccataagttgttcaggaaa
gtagaatcacggagcaccaacagatttgaaaatatcatctctcagctgatgaaaaagaca
gagagtctggtaaagagtgtctttgatgaactcggtaccataagccttgaaagcttatct
caaattcgaaacaggcgttttggaacacagaaatacgaacagtggatcgttgacgttcag
aagaagtgcaccgtgctgcagctgccggacaaagagagagagagcagggtctgcaaagcg
ctgtttctctacacttcccatttgcggaaatttaatgatgctctcattatcaatgagcat
gcacggacaaaagatgccctggattacttgaaagacttcttccgtaatgtccgagcgtca
ggatttgatgagattgagcaggatctcactcgaagatttgaagaaaagctgcaagaacta
gagagcatttccatggaccccagcaacgagaaccctaaactcagggacctctgctacgtc
ttgcaggaggagtaccacctgaacccagagaccagaaccattctctttgtgaaaaccaga
gcgcttgtggatgctttaaagaaatggattgaagaacattctacactcagctttctaaaa
cctggcatattgactggacgtggcaaaacaaatcagaacataggaatgaccctcccagca
cagaagtgcgtactggatgcattcagaacccacggagacaacaagatcctgatcgccacc
tcggtggctgatgaaggcattgacatcgcgcagtgcaatctggtcatcctgtacgagtac
gtgggcaacgtcatccgaatgatccagaccagaggcagaggaagagcaagaggtagcaag
tgcttccttctgactagtaatgctgatgtaattgaaaaagaaaaaatgaacatgtacaaa
gaaaaaatgatgaatacctccattttaagccttcagacatgggatgaagcagcatttaaa
gaaaagattcgccagatacagattcatgaaaaattaatcagggataatcaaggaaaaata
gaacctgtacttgataaggaaaataaaaagctgctctgcagaaagtgcaaagcctttgca
tgttatacggctgatataagagtgatagaggaatgccattacactgtggttggagatgct
ttcagggagtgctttgtgactagatcccatcccagaccaaagaattttgggatttttgag
aagaaagcaaagatattctgtggtagacaggactgcagccacgactggggcatctgtgtg
aggtacaagacatttgacatcccacttataaaaattgaaagttttgtggtggaggatgtt
gccactggagctcagaggctgtatgcaaagtggagggactttcattttgagaagctacca
tttaatgccgcagaaatgtccaaatga
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