Paracoccus sediminicola: PAF18_00140
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Entry
PAF18_00140 CDS
T09284
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00270
Cysteine and methionine metabolism
pdim00450
Selenocompound metabolism
pdim00670
One carbon pool by folate
pdim01100
Metabolic pathways
pdim01110
Biosynthesis of secondary metabolites
pdim01230
Biosynthesis of amino acids
pdim04980
Cobalamin transport and metabolism
pdim04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PAF18_00140 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PAF18_00140 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PAF18_00140 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PAF18_00140 (metH)
04980 Cobalamin transport and metabolism
PAF18_00140 (metH)
Enzymes [BR:
pdim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
PAF18_00140 (metH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WBU56894
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Position
33111..36842
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AA seq
1243 aa
AA seq
DB search
MAELPRSDVFEQIRKLAQQRILILDGAMGTQIQQLGLSEEDFTGHGAGCACHIHSDHPQK
GNNDLLNLTRPDAIEEIHYLYAMAGADIVETNTFSSTTIAQADYALQDKVRDLNFEGARL
ARKAMDRATAEDGRPRFVAGALGPTNRTASISPDVNNPGYRAVTFDQLAEAYAEQTRALI
EGGADLILIETIFDTLNAKAAIFACEQVFAENNLRLPVMISGTITDLSGRTLSGQTPTAF
WHSIRHAQPLTVGLNCALGAEAMRPHLAEISDAADTLVCAYPNAGLPNEMGEYDETPEQM
AAQVADFAREGLVNVVGGCCGSTYDHIRAIAEAVRDAPPREIPEKEPLLRLSGLEPFTKT
DDIPFVNVGERTNVTGSARFRKLITNGDYATALDVARDQVENGAQIIDVNMDEGLIDSEK
AMVDYLNLIASEPDIARVPIMVDSSKWEVIEAGLKCIQGKPVVNSISLKEGEEQFLHQAR
LCRAYGAAVIVMAFDETGQADTENRKVEICTRAYELLTQEIGFPPEDIIFDPNIFAVATG
IEEHDNYGVDFINATRRITQTLPHVHISGGVSNLSFSFRGNEPVREAMHAVFLYHAIQAG
MDMGIVNAGQLAVYDQIDDELREACEDVVQNRRSDATERMLEIAEKYRGEGGAKAREKDL
SWRELPVEKRLEHALVNGITEYIDADTEEARQRAERPLHVIEGPLMAGMNVVGDLFGAGK
MFLPQVVKSARVMKQAVAHLLPYMEAEKAESGEESSNGKVLMATVKGDVHDIGKNIVGVV
LACNNYEIIDLGVMVPATKILETAKAEKVDIIGLSGLITPSLDEMVHVAAEMEREGFDLP
LLIGGATTSRVHTAVKINPRYHKGQAIYVTDASRAVGVVSALLSDQRESYASNINAEYEA
AAEKYNRGDKNKTRLPLTDARANPVPVDFAEWQATTPKFLGTRVIEDFDLAEIARYIDWT
PFFQTWEMRGVYPRILEDEKQGEAARALFADAKAMLDQIIAENWLTPRAVIGFWPANRVG
DDIRLYTDEDRNSELATFYTLRQQVSKREGRPNAALADFVAPEGQADYVGGFVVTSGPQD
HQLANRFKEKGDDYSAIMVQALSDRFAEALAELMHERVRRDHWGYAPDEDLSNAELISEG
YGGIRPAPGYPAQPDHTEKVTLFDLLNATEATGVELTESMAMWPGSSVSGIYIGHPDAYY
FGVAKVEEDQVLDYAERKGMEVTEVERWLAPVLNYVPGQAAAE
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaacttccccgctctgatgtcttcgaacagatccgcaagctggcgcagcagcgt
atcctcattctcgatggcgccatgggcacgcagatccagcaactcggcctgtccgaggag
gatttcaccggtcatggtgcgggctgcgcctgccatatccactcggatcacccgcaaaag
ggcaataacgacctgctgaacctgacccggcccgatgcgatcgaagagatccattatctc
tatgcgatggctggtgcggatatcgtggaaaccaacacgttttcctcgaccaccatcgcg
caggcggattacgcgttgcaggacaaggtgcgggatctgaacttcgaaggcgcacggctg
gcccgcaaggcaatggatcgcgccacggccgaagacgggcggccgcgtttcgtggcgggt
gcgcttgggccgaccaaccggaccgcctcgatcagcccggatgtgaacaatcccggctat
cgcgcggtgaccttcgaccagcttgccgaggcttatgccgaacagacccgcgccctgatc
gagggcggggccgatctgatcctgatcgagacgatctttgacacgctgaacgccaaggca
gcgatctttgcctgcgagcaggtctttgcggaaaacaatctgcgcctgccggtcatgatc
tcgggcaccatcaccgatctgtcggggcggacgctttcgggtcagacgccgaccgccttc
tggcactcgatccgccatgcgcagccgctgaccgtggggctgaattgcgcgcttggggcc
gaggcgatgcgtccgcatctggcggaaatctcggacgcggcggacacactggtctgcgcc
tatcccaatgccggcctgccgaacgagatgggcgagtatgacgaaacgcccgagcagatg
gcggcgcaggtcgcggatttcgcgcgcgaggggctggtgaatgtggtcggcggctgctgc
ggctcgacctatgaccatatccgggccattgccgaggcggtgcgcgacgcgcccccgcgc
gaaatcccggaaaaagagccgctgctgcgcctgtccgggctggagccgttcaccaagacc
gacgatattcccttcgtcaatgtcggtgagcgcacgaacgtcaccggctcggcccggttc
cgcaagctgatcaccaatggcgactatgccaccgcgctcgacgtggcgcgggatcaggtg
gaaaacggcgcgcagattatcgatgtgaacatggatgaggggctgatcgacagcgaaaag
gcgatggtcgattacctgaacctgatcgcctcggaaccggatatcgcgcgcgtgccgatc
atggtggacagctcgaaatgggaggtgatcgaggccgggctgaaatgtattcagggcaag
ccggtggtgaactcgatcagcctcaaggaaggcgaggaacagttcctgcaccaggcccgc
ctttgccgggcctatggggcagcggtgatcgtgatggccttcgacgagaccgggcaggcc
gataccgaaaaccgcaaggtcgagatctgcacccgcgcctatgagctgctgacgcaggaa
atcggctttccgcccgaggacatcatcttcgatccgaatatcttcgccgtggcgaccggg
atcgaggagcacgacaattacggcgtcgatttcatcaacgccacgcgccggatcacccag
accctgccgcatgtgcatatctcgggcggggtgtcgaacctgtccttcagcttccgcggc
aacgaacccgtgcgcgaggcgatgcacgcggtgtttctctatcacgccattcaggccggg
atggatatgggcatcgtcaatgccggccagctggcggtctatgaccagatcgacgacgag
ctgcgcgaggcttgcgaggatgtcgtccaaaaccgccgcagcgacgcgaccgagcgtatg
ctggagattgccgagaaatatcgcggcgagggcggggcgaaggcgcgcgaaaaggacctg
tcatggcgcgaattgccggtcgaaaagcggctggaacacgcgcttgtcaacggcatcacc
gaatatatcgacgccgacacggaagaggcgcggcagagggccgagcgcccgctgcatgtc
atcgaaggcccgctgatggcggggatgaacgtggtgggcgacctgttcggcgcgggcaag
atgttcctgccgcaggtggtgaaatccgcccgggtgatgaagcaggccgtggcccatctg
ctgccatatatggaggccgagaaggccgaatccggcgaggaaagcagcaacggcaaggtg
ctgatggcgacggtgaagggcgatgtgcacgatatcggcaagaacatcgtcggcgtcgtg
ctggcctgcaataattacgagatcatcgaccttggcgtgatggtgccggcgacgaagatc
ctggaaaccgcaaaggccgagaaggtcgatatcatcggcctgtcggggctgattaccccc
tcgctggatgagatggtccatgtcgccgccgagatggagcgcgagggtttcgatcttccc
ctgctgatcggcggggcgacgaccagccgggtgcatacggcggtcaagatcaacccgcgc
tatcacaagggtcaggcgatctatgtgaccgatgctagccgcgcggtgggcgtggtctcg
gcgctgctctcggatcagcgcgagagctacgcttccaatatcaacgccgaatatgaggca
gcggccgagaaatataaccgcggcgacaagaacaagacgcggttgcctctgacagatgcg
cgcgccaatccggtcccggtggacttcgcggagtggcaggccaccacgccgaaattcctc
ggcactcgggtgatcgaggatttcgatctggccgagatcgcccgctatatcgactggacc
ccgttcttccagacatgggagatgcgcggcgtctatccccgcattctcgaggatgaaaaa
cagggcgaggccgcgcgggcgctctttgccgatgcgaaggcgatgctggaccagatcatc
gccgagaactggctcactccgcgtgcggtgatcggtttctggcctgcgaaccgcgtcggt
gacgatatccggctttacaccgacgaagaccgcaattccgagcttgcgaccttctacacg
ctgcgccagcaggtctcgaaacgcgaggggcggcccaacgcggcgcttgccgatttcgtg
gcacccgaggggcaggcggattatgtcggcggcttcgtggtgacctcgggtccgcaggat
caccagcttgcgaaccggttcaaggaaaagggtgacgattattccgcgatcatggtgcag
gcgctgtcggaccgctttgccgaagcgcttgccgaattgatgcatgaacgcgtgcgccgc
gatcactggggctatgcgcccgacgaggatctgtccaatgccgagctgatctctgaaggc
tatggcggcatccggcccgcgcccggctatcccgcacagccagatcataccgagaaggtg
acgctgttcgacctgctgaatgcaaccgaggcgaccggggtcgagctgacagagtcgatg
gcgatgtggcccggctcatccgtttcgggcatctatatcggccatccggacgcctattat
ttcggcgtcgccaaggtcgaggaggatcaggtgctcgattatgcagaacgcaaggggatg
gaggtcaccgaggtcgaacgctggctcgcgccggtgctgaactatgttcccgggcaggca
gcggcagaatag
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