Paracoccus sediminicola: PAF18_11265
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Entry
PAF18_11265 CDS
T09284
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pdim
Paracoccus sediminicola
Pathway
pdim01501
beta-Lactam resistance
pdim01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PAF18_11265
01503 Cationic antimicrobial peptide (CAMP) resistance
PAF18_11265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdim02000
]
PAF18_11265
01504 Antimicrobial resistance genes [BR:
pdim01504
]
PAF18_11265
Transporters [BR:
pdim02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PAF18_11265
Antimicrobial resistance genes [BR:
pdim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PAF18_11265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WBU56069
LinkDB
All DBs
Position
2278057..2281191
Genome browser
AA seq
1044 aa
AA seq
DB search
MARFFIDRPVFAWVISIIIMGIGVLSILSLPVAQYPQIAPPSVSIRANYPGASAETVSNT
VTQIIEQQMTGLDGMRYMSSSSTSAGTSSTTLTFETGTDVDIAQVQVQNKLSQATSLLPE
PVQRQGISVEKATSGFLMVIGLIGNEDYDDADLADYMVTNLVDDLSRIEGIGSVQVFGAQ
YAMRIWLDPSKLAAYEMTPSDVVAAVSAQNTQISAGAFGALPTVEGQQLNATVTAQSLLS
TPEEFRQIVLRAQEDGGLVLLQDVARVEIGAESYVANATYNGRPSSGMALSLAPGANALD
TAELVKDRMEEFAEFFPEGVEYVIPFDTSPFVEISIEEVVKTLIEAIVLVFLVMYVFLQN
WRATLIPTLAVPIVLLGTFGIMAVFGFTINTLTMLAMVLAIGLLVDDAIVVVENVERIME
EEGLDPREATRKSMGQITGALIGIALVLSAVFVPMAFFGGSTGVIYQQFAITIVSAMALS
VVVALTLTPALCASMLKPSHGKRGGLFGLFNRGFDSTTNGYTSAVGWLVRRPLRMLLVYI
GMAAVMVLLFLRTPQGFLPEEDQGIMFVLIQAPTGATAERTGDVLDQVQDYFLNAEAESV
DSMFGVVGFSFAGQGQNVGMAFVRLKDWEERTDPAQSVQAIAGRAYGALSQIRDAMVFPV
VPPAVIELGNVSGFDFYLQARGGQSHEQLLEARNQMLGMAAQSEMITQTRPSGLEDASQF
QLNIDWRKAGAMGISATDVANLLQVAWTGSYVNDFVDRGRIKKVYVQGEATSRATPSDLD
KWRVRNATGGLVPFSNFAEGEWTFGPQGLNRYNGVPSMQIQGSPMPGVSTGDAMAEIERL
AGQLPTGFDVAWTGLSLEERESGDQTMLLYALSLAAVFLCLAALYESWSIPLAVILVMPI
GVLGALLGAYLGGFDNGVFFQVGLLTVIGLTGKNAILIVEFAREQSVAGKPLFKAVVEAA
RQRFRPILMTSIAFSLGVTPLVLSSGAGAAGRNAIGSTVLGGTLMATVFGILFAPLFYVL
MRRLLGRKDKFDDEPTPQPQAQPR
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtttctttatcgaccgcccggttttcgcttgggtcatctcgattatcatcatg
gggatcggggtgctctcgatcctgtcgcttccggtggcgcaatatccgcagatcgcgccg
ccctccgtctcgatccgcgcgaattaccccggtgcctcggccgagaccgtgtcgaatacg
gtgacccagatcatcgagcagcaaatgaccgggctggacgggatgcgctacatgtcctcc
agctcgacctcggcgggcacgtcttcgacgacgctgaccttcgagaccggcaccgatgtc
gatatcgcgcaggtgcaggtgcagaacaagctgagccaggcgacctcgcttctgccggaa
cccgttcagcgtcagggaatctcggtcgaaaaggccacctcgggctttctgatggtgatc
ggtctgatcgggaacgaggattacgacgacgcggatcttgccgattacatggtgaccaat
ctcgtcgacgatctgagccggatcgaggggatcggctcggttcaggttttcggcgcgcaa
tatgcgatgcggatctggctggacccgtccaagctggccgcctatgagatgacgccctcg
gacgtggttgcggcggtctcggcgcagaatacccagatttccgcgggggcgttcggggcg
ctgcccaccgtcgagggccagcaactcaacgcgacggtgacggcccagtcactgctgtcg
acacccgaggagttccgccagatcgtgctgcgtgcgcaggaagatggcggtctggtgctg
ttgcaggacgtggcgcgggtcgagatcggggctgaatcctatgtcgccaacgcgacctat
aacggccgcccctcttccggcatggcgctgagcctcgcgccgggggccaacgcgctcgac
acggcagagctggtcaaggaccggatggaggaattcgccgagttcttccccgagggtgtc
gaatacgtgatcccctttgacacttcgcccttcgtcgagatctcgatcgaggaggtggtc
aagacgctgatcgaggcgatcgtgctggtcttcctggtgatgtatgtgttcctgcagaac
tggcgcgcgacgctgatcccgacgctggccgtgcccatcgtgctgcttgggacattcggc
atcatggcggtgttcggatttaccatcaacacgctgaccatgctggccatggtgctggca
atcggtctgctggtcgatgatgccatcgtggtggtggaaaatgtcgagcgcatcatggag
gaagaagggctcgacccgcgcgaggcgacgcgcaagtcgatgggtcagatcacaggggcg
ctgatcggcatcgcgctcgtcctctcggcagtattcgtgccgatggcgtttttcggtggc
tcgacgggggtgatctatcagcaattcgcgatcaccatcgtctcggccatggctttgtcg
gtggtggtcgcgctgacgctgacgccggcgctgtgcgcatcgatgctgaaacccagccat
ggcaagcgcggtgggctgttcgggctgttcaatcgcggcttcgattcgaccaccaacggc
tatacctcggcggttggctggctggtccgccgcccgctgcggatgcttctcgtctatatc
ggcatggcggcggtgatggtgctgctgttcctgcgcacgccgcagggcttcctgcccgaa
gaggatcagggcatcatgttcgtgctgatccaggcaccgaccggcgccactgccgagcgc
accggtgacgtgctcgaccaggtgcaggattatttcctgaacgcagaggcggaatcggta
gattcgatgttcggcgtggtcgggttcagctttgccggacagggacagaatgtcggcatg
gccttcgtgcggctgaaggattgggaggaacgcaccgatcccgcccagtccgtgcaggcc
atagccgggcgagcctatggcgccctcagccagatccgcgacgccatggtgttcccggtc
gtgccgcctgcggtgatcgagctggggaacgtgtcaggcttcgatttctatcttcaggcg
cgaggcggtcagagccacgagcagttgctggaagcgcggaaccagatgctgggcatggcc
gcacagagcgagatgatcacccagacccgcccctcggggctggaagacgcgagccagttc
cagttgaatatcgactggcgcaaggccggggcgatggggatcagcgccaccgatgtggcc
aatctgctgcaagtggcctggaccggatcatatgtgaacgacttcgtggatcgcgggcgg
atcaagaaagtctatgtgcagggtgaggcgacaagccgggccacgccgtcggatctggac
aaatggcgggtgcgcaacgcgaccggcggtctggtgccgttctcgaatttcgcggaaggc
gagtggaccttcggaccgcaggggctgaaccgctataacggcgtgccctcgatgcagata
cagggcagcccgatgccgggcgtaagcaccggcgacgccatggccgagatcgagcggctg
gccgggcagcttccgaccgggttcgacgtcgcctggaccgggctgtcactggaggaacgc
gaatccggcgaccagaccatgctgctctatgcgctgtcgctggcagcggtgttcctatgc
ctggccgcgctttacgaaagctggtcgatcccgctcgccgtcatcctggtcatgcccatc
ggggttctgggcgcacttctgggggcgtatctgggcgggttcgacaatggtgtgttcttc
caggtcgggcttctgaccgtgatcggtctaaccggcaagaacgcgatcctgatcgtggaa
tttgcgcgcgagcaatccgttgccggcaagccgctgttcaaggcggttgtcgaggccgcg
cggcagcgtttccggccgatcctgatgacctcgatcgccttctcgctcggggtgacaccg
ctggtcctgtcctcgggcgcgggggcggcgggccgcaacgcgatcggctcgaccgtgctg
ggcgggacgctgatggcgacggtgttcggcattctcttcgcgccgctcttttacgtgctg
atgcgccgtctgctcgggcggaaggataaattcgacgacgagccgacgccgcagccacag
gcgcagccccgctga
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