KEGG   Paracoccus sediminicola: PAF18_16565
Entry
PAF18_16565       CDS       T09284                                 
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
pdim  Paracoccus sediminicola
Pathway
pdim03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pdim00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PAF18_16565
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pdim02044]
    PAF18_16565
Enzymes [BR:pdim01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PAF18_16565
Secretion system [BR:pdim02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   PAF18_16565
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind DEAD
Other DBs
NCBI-ProteinID: WBU58710
LinkDB
Position
p2:31210..33204
AA seq 664 aa
MGKARIATGVLLVTLVTGAMGYTIASAVLTYQDLGFGAEIDFAYIAQNYLAILDRRPEDA
QLIHLIIGSFAAAGLMLSLALSGSALTRFGQTHWQSAREMKANGFFGAPGTGFILGKLGS
PKSRAKYICSKVFPHALIVAPTGRGKTSGFVIPNLLTWQGSAVTLDVKGECFEATARHRA
AQGDKVYRFAPTDWEGKRTHRYNPLLRIFELKDPARQQMELQLLATLFLQSDNDRVQGLL
KGGIDLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQKEYFARGHEVDNRAAKLIFTRLAS
TNNDTLTSYVSLLMTSGLDQWQNPAIDEATAVSDFDFRTIRKKPFSVYLVVQPLMVKPLA
PLIRLFFSDLLSAMQEKDPGPDEPWPVMIMLDEFNRLGKMPIVVESIETLRTYRGHLAVV
TQTIPALDEIYGENTRRALQGNAGVKLYLTPSDEKTVEELSKAVGKTTKTVVTRSQSIGK
NPFEGRSQSTRTEESSLLPEDEARRLPLDEIVMVIDAQMPVRAKRIQYFDDRLFKAIHAA
QSGELPFPEPGGGGPQGTLPLSVRAMPMRPPPDGSGGSEADVEAARQAADGQSSVQTDVA
TKKTAPVVQAVVAEEQRQMEMDFEGQVADSDTVDDEAQMRSAVDGLNDMEAMLQEEGGKK
PIHR
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgggaaaagcgcggatcgcgaccggtgtgcttctcgtcacgctggtgaccggggccatg
ggctataccatcgcctcggcggtgctgacctaccaggatctcggcttcggggccgagatc
gactttgcctatatcgcgcagaactatctggcgatcctggaccgccgcccggaggacgcg
caacttattcacctgatcatcggcagcttcgctgccgccggcctcatgctgagcctcgcc
ctctcggggtccgccctgacacgctttggccagacccattggcagagtgcgcgcgagatg
aaggccaacgggtttttcggcgcgcccggcaccggcttcatcctcggcaagctcggttcc
ccgaagtcccgcgccaagtacatctgctccaaggtcttcccgcatgcgctgatcgtggcg
ccgacgggccggggcaagacctccgggttcgtcattccgaacctgctgacctggcaaggc
tccgccgtgacgctcgatgtgaagggggagtgtttcgaggccacggcccgccaccgtgcg
gcccaaggcgacaaggtctatcgctttgcccccaccgattgggagggaaagcgcacgcat
cgctacaacccgctcctgcgtatctttgagctgaaagatcccgcgcgccagcagatggaa
ctgcagctcctggcgacgctcttcctgcaaagcgacaatgaccgggtgcagggcctcctc
aaaggcgggatcgatctctttgtggcggcaggactgctggccttccagcgcaagcgcccc
accttgggcgagatctaccgcatcgcggcctccggagggaacaagcagaaggagtatttc
gcgcgggggcatgaggtcgataacagggccgccaagctgatcttcacgcggctcgcctcg
accaacaacgacacgctgacctcttacgtctcgctcctgatgacctcggggctcgatcaa
tggcagaacccggccatcgatgaagcgacggcagtctcggactttgatttccggacgatc
cgcaagaagcccttttcagtctatctcgtggtccagccgctgatggtgaaaccgctcgcg
ccgctgatccgcctcttcttctccgatcttctttccgccatgcaggaaaaagaccccggc
cccgacgagccctggccggtgatgatcatgctcgatgagttcaatcgcttgggcaaaatg
cccatcgtggtcgagagcatcgagaccctgcggacctatcgtggtcatctggcagtggtc
acccaaaccatccccgccctcgatgaaatctatggcgagaacacccgccgcgccttgcag
gggaatgcgggcgtgaagctctacctgacgccctccgatgaaaagaccgtcgaagagttg
agcaaggctgtcggcaagaccacgaagaccgtggtcacgcggtctcagtccatcggcaag
aaccccttcgaagggcgcagccagtcgacccggaccgaagaaagttcgttgctccccgaa
gacgaggcccgccgcctgccgctcgacgagatcgtcatggtcatcgatgcgcaaatgcct
gtccgggcaaaacggatccagtacttcgacgaccgactcttcaaagcgatccacgcggca
cagtcgggcgagttgccgtttccggagccggggggaggggggccgcagggcactctgccg
ctaagtgtgcgcgccatgccgatgaggccgccaccggacgggtcaggcggatctgaggcc
gacgttgaggccgcacgccaggctgctgatggccaatcttcagtgcaaaccgatgtcgcc
acaaagaagacagcacccgtcgttcaagctgtcgtcgcagaggaacagcggcagatggag
atggattttgagggccaggttgcggattccgacacagtggatgatgaggcgcagatgcgc
tctgcagtcgatggcttgaacgacatggaagcgatgctgcaggaggagggtggcaaaaag
ccaattcaccggtag

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