Paraburkholderia dioscoreae: PDMSB3_0885
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Entry
PDMSB3_0885 CDS
T08115
Symbol
cobQ
Name
(GenBank) Cobyric acid synthase
KO
K02232
adenosylcobyric acid synthase [EC:
6.3.5.10
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00860
Porphyrin metabolism
pdio01100
Metabolic pathways
pdio01240
Biosynthesis of cofactors
Module
pdio_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PDMSB3_0885 (cobQ)
Enzymes [BR:
pdio01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.10 adenosylcobyric acid synthase (glutamine-hydrolysing)
PDMSB3_0885 (cobQ)
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GFIT
Motif
Pfam:
GATase_3
CbiA
AAA_26
Motif
Other DBs
NCBI-ProteinID:
VVD27347
UniProt:
A0A5Q4Z5W6
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All DBs
Position
I:919031..920644
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AA seq
537 aa
AA seq
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MKTHGPVPRVSAALPPASLSVLSVHRQALAQDSVTTTSTSHNAVPVPRGTLMIQGTTSDA
GKSTLVAGLCRLARRAGARVAPFKPQNMALNSAVTVDGGEIGRAQALQAVAAGIAAHTDL
NPVLLKPTSDRGAQVIIHGKARTNLDARAYHDYKPVAFEAVLQSYARLQAAYDTIFVEGA
GSPAEINLRDRDIANMGFAEAVDCPVVLVADIDRGGVFAHLTGTLACLSASEQARVRGFI
INRFRGDVGLLQPGLDWLEAKTCKPVLGVIPYLHGLTLDAEDMLPPELRAAHSGGAGRML
RVVVPVLPHISNHTDFDALRAHPQVDFHYVRSGTPPPPADLIILPGSKNVPGDLAFLRAQ
GWDAVLQKHLRYGGRVIGICGGMQMLGREVADPHGVEGAPGTSAGLGWLDYSTVLTRDKT
LKNVTGRLALPGAPEVAGYEIHMGETRGPALDTPALQLGDARDARPDGAISADGQILATY
VHGLFDTPAACAALLAWAGLSDAEAIDYPALREASLERLADTLAEHLDLAKLFAAMG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcacggcccggtgccccgcgtgagcgctgcgttgccgccagcttcattgtct
gttttgtctgttcaccgccaggccctggcccaagactccgtgaccaccacttcgacctcg
cataacgccgtacccgtgccgcgcggcacgctgatgatccagggcaccacgtccgacgcg
ggcaagagcacactggtcgccggattgtgccggctcgcgcgccgcgccggcgcgcgggtc
gcgccgttcaagccgcagaacatggcgctcaacagcgcggtaacggtggacggcggcgag
atcggccgcgcgcaggctttgcaggcggtggccgcgggcattgccgcgcacaccgatctg
aaccccgtgctgctcaagccgaccagcgaccgcggcgcgcaggtgatcatccacggcaag
gcgcgcacgaacctcgacgcgcgtgcgtaccacgactacaaacccgtcgcgttcgaagcc
gtgctgcagtcgtatgcgcgtctgcaagcggcgtacgacacgatttttgtcgaaggcgcg
ggcagccccgccgaaatcaatctgcgcgaccgcgatatcgccaacatgggttttgcggag
gcggtggattgcccggtagtgctggtggccgatatcgaccgaggcggcgtgttcgcccat
ctcacgggcacgctcgcgtgtttgtcggcgagcgagcaggcgcgggtgcgcggcttcatc
atcaaccgttttcgcggcgacgtcggtttgctgcagcccggtctggactggctcgaagcg
aagacctgcaagccggtactcggcgtgatcccctatctgcatgggctgacgctcgacgcc
gaagacatgctgccgcccgaattgcgcgcggcgcatagcggtggcgcggggcgcatgctg
cgggtagtcgtgccggtgctgccgcacatcagcaatcacacggatttcgacgcgttgcgc
gcgcatccgcaggtcgattttcattacgtgcgcagcggcacaccgccgccgccggccgat
ctgatcattctgccgggctcgaagaacgtgcctggcgacctggcgtttctgcgcgcacaa
ggctgggacgcggtgctgcaaaagcatctgcgctatggcggccgggtgatcgggatttgc
ggtggcatgcagatgctggggcgtgaagtggccgatccgcatggcgtggagggcgcgccg
ggtacgtccgcgggactcggctggctcgactattcgacagtgctcacgcgcgacaagacg
ctgaagaatgtgaccgggcgcctcgcgttgcccggcgcgccggaagtggccggctacgag
atccatatgggcgagacgcgcgggccggcgttggacacgcccgcgctgcaattgggcgac
gcgcgggatgcccgccccgacggcgcgatctccgccgatggccagattctcgccacctac
gtgcacggcctgttcgacacgccggccgcctgtgcggctttgctcgcgtgggcgggtttg
agcgatgccgaggcaatcgactacccggcgttgcgtgaggcgtctctggaacgccttgcg
gatacgcttgccgagcatctcgatctggcgaaactttttgctgcgatgggttga
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