KEGG   Paraburkholderia dioscoreae: PDMSB3_1498.1
Entry
PDMSB3_1498.1     CDS       T08115                                 
Symbol
stcD
Name
(GenBank) putative N-methylproline demethylase
  KO
K21833  N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
Organism
pdio  Paraburkholderia dioscoreae
Pathway
pdio00260  Glycine, serine and threonine metabolism
pdio01100  Metabolic pathways
Module
pdio_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PDMSB3_1498.1 (stcD)
Enzymes [BR:pdio01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.7  With an iron-sulfur protein as acceptor
    1.5.7.3  N,N-dimethylglycine/sarcosine dehydrogenase (ferredoxin)
     PDMSB3_1498.1 (stcD)
SSDB
Motif
Pfam: Oxidored_FMN Pyr_redox_2 NAD_binding_8 FAD_oxidored HI0933_like FAD_binding_2 Pyr_redox DAO GIDA AlaDh_PNT_C Thi4 Pyr_redox_3 FAD_binding_3 Amino_oxidase NAD_binding_7 3HCDH_N
Other DBs
NCBI-ProteinID: VVD32782
UniProt: A0A5Q4YXQ5
LinkDB
Position
II:1545475..1547538
AA seq 687 aa
MRYPNLFKPLTLNKLTLRNRIVSTAHAEVYAEPGGLPGDRYIRYYEEKAKGGVGLAVCGG
SSPVSIDSPQGWWKSVNLATDKIIDPLARLAEAMHTHGAKIMIQATHMGRRSAFHGEHWP
HLMSPSGVREPVHRGNAKIIEVEEIRRIISDFAAAAKRVKDAGMDGVEISAAHQHLIDQF
WSPRTNFRTDEWGGSLENRLRFGTEVLKAVREAVGADFCVGLRMCGDEFHEDGLDHEQLK
EIAQAMSETGLIDYLGVIGSGADTHNTLANCMPPMALPPEPFVHLAAGIKSVVKLPVMHA
QSIRDAGQAERLLASGMVDLVGMTRAQIADPHMVIKIRDGREDEIKQCVGANYCIDRQYN
GLDVLCVQNAATSREATMPHVIARTRGPKRKVVVVGAGPAGLEAARVAKSRGHDVVLFEK
NDYVGGQIMLAAKAPQREQMAGIVRWFDMETKRLGVERRLGVAADEKTIMAEKPDIVVLA
TGGSSFTSQVAAWGVEEGLAVSSWDVLSGKVEPGKNVLVYDGVSTHAGAGVADFMSSRGS
NVEIVTPDVKVADDVGGTTFPIFYRRLYAQGAIHTPNYWLDKVYEEDGKKIAVLRNEYTE
EQEERAVDQVVIENGSTPNDELYWKLKPESVNRGQVDVHKLFASEPQPSLSEELGNGRFL
LFRVGDCISMHNIHGAIYDALRLCKDF
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgcgttacccgaaccttttcaagcctctcacgctgaacaagctgaccttgcgtaaccgc
attgtcagcaccgcgcacgcggaggtctatgcggaaccgggcgggctgcccggcgaccgc
tatatccgttactacgaagagaaggccaagggtggcgtaggcctcgccgtgtgcggcggt
tcgagcccggtgtcgatcgacagcccgcaaggctggtggaagtcggtgaacctcgcgacc
gataagatcatcgatccgctcgcacgccttgccgaagcaatgcacacgcatggcgcgaag
atcatgattcaggccacgcatatgggacgccgctcggcgtttcatggcgagcattggcca
catctgatgtcgccttccggcgtgcgggagcccgtgcatcgcggcaatgcgaagatcatc
gaggtcgaggaaattcgccgcatcatcagcgacttcgcggccgcggcaaagcgggtgaaa
gatgcgggcatggacggtgtcgaaatctcggcggcgcaccagcatctgatcgaccagttc
tggagcccgcgcaccaacttccgcaccgacgaatggggcggctcgctggaaaaccgtctg
cgtttcggcacggaagtattgaaggccgtgcgtgaagcggtgggcgcggacttctgcgtc
ggcttgcgcatgtgcggcgacgagttccatgaagacgggctcgatcacgaacaactgaaa
gagatcgctcaggccatgagcgaaaccggcctgatcgattaccttggtgtgatcggttcg
ggtgcggacacacataacacgctggccaactgcatgccgccgatggcgctgccgcccgag
ccgttcgtgcatctcgcggccggtatcaagtcggtggtgaagttgccggtcatgcacgcg
caaagcattcgcgacgcgggccaggccgagcgtctgcttgccagcggcatggtcgatctg
gtcggcatgacgcgcgcgcagattgccgatccgcatatggtcatcaagatccgcgacggc
cgcgaggacgaaatcaagcagtgcgtaggcgcgaattactgcatcgaccgccagtacaac
gggctcgacgtgctgtgcgtgcagaacgccgcgacctcgcgcgaagcgaccatgccgcat
gtgatcgccagaacgcgcgggccgaagcgcaaggtggtcgtggtcggcgcaggcccggcg
gggctagaagcggcgcgtgtggcgaagtcgcgcggtcacgacgtggtgctgttcgagaag
aacgactacgtgggcggccagatcatgctggccgcgaaagcgccgcagcgtgaacagatg
gcgggcatcgtgcgctggttcgacatggagacgaagcgcctcggcgtggagcggcgcctt
ggtgtcgccgccgacgagaaaaccatcatggccgagaagccggacatcgtcgtgctcgcc
acgggcggatcgtcgttcacgtcgcaagtcgcggcatggggtgtcgaggaaggcctcgcc
gtgagttcgtgggacgtcctgtcgggcaaggtcgagccgggcaagaacgtgctggtgtac
gacggcgtcagcacgcatgccggcgcgggcgtggccgatttcatgtcgagccgcggttcg
aatgtcgagatcgtgacgccggatgtgaaagtggccgacgacgtaggcggcaccacgttc
ccgattttctaccgccggctctatgcgcaaggcgcgatccatacgccgaactactggctc
gacaaggtctacgaagaagacggcaagaaaatcgccgtgctccgcaacgagtacaccgaa
gagcaggaagagcgcgcggtcgatcaggtggtgatcgaaaacggcagcacgccgaacgac
gagttgtactggaagctcaagccggagtcggtcaatcgcggtcaggtcgacgtgcataag
ctgttcgcgtccgagccgcagccgtctttgagcgaagaactcggcaatggccgcttcctg
ctgtttcgcgtcggcgactgcatttccatgcacaacattcacggcgcgatctacgacgcg
ctgcgcctttgcaaggatttctga

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