Paraburkholderia dioscoreae: PDMSB3_1713.1
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Entry
PDMSB3_1713.1 CDS
T08115
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio01501
beta-Lactam resistance
pdio01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDMSB3_1713.1
01503 Cationic antimicrobial peptide (CAMP) resistance
PDMSB3_1713.1
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdio03036
]
PDMSB3_1713.1
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_1713.1
01504 Antimicrobial resistance genes [BR:
pdio01504
]
PDMSB3_1713.1
Chromosome and associated proteins [BR:
pdio03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PDMSB3_1713.1
Transporters [BR:
pdio02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PDMSB3_1713.1
Antimicrobial resistance genes [BR:
pdio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDMSB3_1713.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
VVD32997
UniProt:
A0A5Q4ZLZ4
LinkDB
All DBs
Position
II:1764533..1765792
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AA seq
419 aa
AA seq
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MNDSSLQPGLGEQPPKAVKTTHTAHAGAAHPAPEPDPHAKPRRRLWPFALGGLAVALLIA
GIVPRLHASAALTEQTQAQSMLVVSVVKPRPAPSVNELLLPGSVMPFAEASIYARTSGYL
AHWNTDIGTQVKSGQVLATIEAPDLDAQLRQARADEATAQANFDYAKTTAQRWEDMLKTQ
SVAQQDADAKVSDMEARRAMLASAQANVAHLAELVSYEKITAPFDGVITARNVDVGALVT
AGGTPGTAGMSGELFHIQQNGVLRVFVDVPQNDAPYVTPATGVYLSAQQYPGRRIPAKVA
RSTGSIDPSSRTLRVEVDVDNKDGALMPGAYTQVHLQLQSATPALDVPVSALLFRPDGVT
VAVVDSNGRAVLKTVHIGRDFGTHVEITTGLAATDRVIDNPSDSLSTGQMVQIMPAMHG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcatcacttcagccggggcttggtgagcagccacccaaggccgtgaaaacc
acccacaccgctcacgccggcgccgctcaccccgcgcccgagcccgacccacacgcgaaa
ccgcgccgccgtctgtggccgttcgcactgggcggcctcgccgtggcgctgctgatcgcc
ggcatcgtgccgcgccttcatgccagcgccgcgctcaccgagcaaacacaagcgcaaagc
atgctcgtcgtgtcggtggtcaagccgcgccccgcgccgagcgtgaatgaactgctgctg
cccggctccgtgatgccgttcgccgaagcctcgatctacgcgcgcacgagcggctatctc
gcgcactggaacaccgacatcggcacgcaggtgaaaagcgggcaggttctcgcgacgatc
gaagcgcccgatctggacgcgcaactgcgccaggcccgcgccgacgaagccaccgcgcag
gccaatttcgactacgcgaagaccaccgcgcagcgctgggaggacatgctgaagacccag
tcggtcgcgcagcaggacgccgacgccaaggtcagcgacatggaagcgcgccgcgcaatg
ctggcgtcggcgcaggccaatgtcgcacatctggccgaactggtctcgtacgagaaaatc
accgcgccgttcgacggcgtgatcaccgcacgcaacgtggacgtcggcgcactggtgacg
gcgggcggcacgcccggcaccgcgggcatgtcgggcgagctgttccatatccagcagaac
ggcgtgctgcgagtgttcgtcgacgtgccgcagaacgacgcgccttacgtcacgccggcc
accggcgtctatctgagcgcccagcagtatccgggccgccgcatccccgcgaaggtggcg
cgcagcaccggctcgatcgatccgtcgagccgcacgctgcgcgtcgaggtggacgtcgac
aacaaggacggcgcgctgatgcccggcgcttacacgcaggtgcatctgcagctgcaatcg
gccacgccggcgctcgacgtgcccgtcagcgccctgctgttccggccggacggcgtgacg
gtcgcggtggtggacagcaatggccgcgcggtgctgaagaccgtgcatatcggccgcgat
ttcggcacgcacgtggaaatcacgacgggactcgccgccaccgaccgcgtgatcgacaac
ccgagcgattcgctgagcaccggccagatggttcagatcatgccggccatgcacggctga
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