Paraburkholderia dioscoreae: PDMSB3_2548.1
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Entry
PDMSB3_2548.1 CDS
T08115
Symbol
gdh
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00220
Arginine biosynthesis
pdio00250
Alanine, aspartate and glutamate metabolism
pdio00430
Taurine and hypotaurine metabolism
pdio00910
Nitrogen metabolism
pdio01100
Metabolic pathways
pdio01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PDMSB3_2548.1 (gdh)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PDMSB3_2548.1 (gdh)
00220 Arginine biosynthesis
PDMSB3_2548.1 (gdh)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
PDMSB3_2548.1 (gdh)
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
PDMSB3_2548.1 (gdh)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
VVD33832
UniProt:
A0A5Q4ZVE0
LinkDB
All DBs
Position
II:complement(2630366..2635207)
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AA seq
1613 aa
AA seq
DB search
MQAKNEEAVTHLLNDVVEFARGRLPEPTFKVVEPFLRHYYDFVDADDLQSRSIADLYGAA
LAHWQTAQRFVAGAERLRVYNPILEQHGWHSDHTVIEIVNDDMPFLVDSVSMAVNRHGLA
LHSVVHPVFRIWRAPDGTIARVSQGAEEATDTRSHLTSFIHFEVDRCGDAAKLDALRDDI
ARVLRDVRAAVEDWPKIVELARVTIKGMKAGEGGPEGLEARAFLEWMVADHFTFLGQRDY
ELVQHDTGYGLRAVPGSGLGILRDALRPVGAAEVTPLPPAAVEIISASSPIFLTKANSRA
TVHRPGYLDYVGIKLADADGKVTGERRFIGLYTSTAYFVSASEIPIVRRKCANIVRRAGF
LAKGHLAKSLVTVLETYPRDELFQAEEDQLYEIALGVLRLQEHQRTRLFVRRDRFDRFVS
CLVFVPRDKYNTDLRQRIANLLADAFNGESVEFTPLLSESTLARIHFVVHAKPGGMPNVD
THELEARLVQVARRWQDDLADALLDAFGEEQGNRLLQHYADSFPAGYRDDYPARTAVRDI
ELIERVQGSERLAMNLYRPIESGPRAFRFKVYRAGLPIALSRSLPMLEHLGVRVDEERPY
LIEALGATPAWIHDFGLELADDAEFDIERVKDLFEEAFEQVWTGAIESDDFNRLVLRAQL
DAREVTILRAYAKYLRQVGSTFSDAYIERAVTGNPAIARMLVELFVARFDPVLGETREAR
VDGWLRTIDSALDQVPNLDEDRILRQFLGVIKATQRTNYYRFDAEGHPKPYLSFKFNPAL
VPGLPEPKPMFEIWVYSPRVEGVHLRGGRVARGGLRWSDRREDFRTEVLGLMKAQMVKNV
VIVPVGSKGGFVVKNPPPQTERDAWMHEGIACYQTFLRGLLDLTDNLAGTAVVPPPDVVR
HDPDDPYLVVAADKGTATFSDYANAISQEYGFWLDDAFASGGSVGYDHKKMAITARGAWE
SVKRHFREMGVDTQTTDFTVVGVGDMSGDVFGNGMLLSPHIRLVAAFDHRHIFLDPNPDP
AVSLAERGRLFVLDRSSWADYDPSLISAGGGVFPRSAKTIPLSQAVQSVLGISAPALAPA
ELMRAILQAPVDLLYNGGIGTYVKASRETHLQVGDRANDAIRVNGADLRCKVVAEGGNLG
LTQLGRIEFAQRGGRINTDAIDNSAGVDCSDHEVNIKILLGLVVAEGEMTEKQRNALLAE
MTDEVGLLVLQDNYYQTQALSIAGRYGVELLDAEARLMRYLERTGRLNRVIEFLPTDEEL
AERQAAKQGLTTPERAVLLAYSKMWLYDALLESSMPEDPLVADMLVEYFPKPLRQRFSEP
MQRHPLRREILATHLTNALVNRVGCEFVHRLMEETDAQPGDIARACIMARDVFDLDHVWR
SIDALDNRVADDVQARMFVEVARLVERSALWFLRQLQSGAVSDGEVAGLLARCRDAAQRL
ASQWPALLPGADLEALSERQRVFADAGVDSELAVRVASGEISAALLDIAEVASTCGRSLE
LVAGVYFALGTLLNSSWISERATALPVPTHWDMLARATALAELARLKRALTTSALAGANE
ASTPDALVEAWRQKRTAQLERYARLLIDLRATGGASLSMLLVIVREMAALERA
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaagaacgaagaagctgtcacgcacttgctgaacgatgtcgtcgaatttgcg
cgggggcgcctacccgaacctaccttcaaggtcgtcgagccgtttctacggcactactac
gatttcgtcgacgccgacgatctgcaaagccgctcgattgccgatctctacggcgccgcg
ctcgcgcactggcaaacggcgcagcgcttcgtagccggcgccgaacggctgcgcgtctat
aacccgattctcgaacagcacggctggcactccgatcacaccgtgatcgaaatcgtcaat
gacgacatgccgtttctggtcgattcggtctcgatggcggtcaaccggcatggcctcgcg
ctgcattccgtcgtgcacccggtgtttcgcatctggcgtgcgcccgacggcacgatcgcg
cgggtgagtcagggcgctgaagaagccaccgacacgcgttcgcacctgacttcgttcatc
cacttcgaagtagaccgttgcggcgacgccgcaaaactcgacgcgctgcgcgacgatatc
gcgagggtattgcgcgacgtgcgggcggcggttgaagactggccgaagatcgtcgaactc
gcgcgcgtcacgatcaaaggcatgaaagccggcgaggggggaccggaaggtctggaagca
cgcgcgtttctcgaatggatggtggccgatcatttcacctttctcggtcagcgcgattac
gaactggtgcagcacgataccggctacggtctgcgcgcggtgccgggctcgggcctgggc
attctgcgcgacgcactgcggccggtaggcgccgccgaggtcacacccctgccgccggcc
gccgtcgagatcatttccgcttcgtcgccgatctttctcaccaaggccaattcgcgggcc
accgtgcaccggccgggctatctggactacgtgggcatcaagctggccgatgcggacggc
aaggtaactggcgagcgtcggttcatcggtctctatacatccacggcgtatttcgtgtcg
gcctcggagattccgatcgtgcggcgcaaatgcgcgaatatcgtgcggcgtgccggattt
ctggccaaaggtcatctggcgaagtcgctcgtgaccgtgctcgaaacctatccgcgcgac
gagctttttcaggccgaagaagatcagctctacgaaatcgcgctaggcgtgctgcgtttg
caggagcatcagcgcacccgtctgttcgtgcggcgagaccgcttcgaccggttcgtgtcg
tgcctcgtgttcgtgccgcgcgacaagtacaacaccgatctgcgccagcgtatcgcgaat
ctgctggccgacgcgttcaatggcgagagcgtcgagttcacgccgctgctttcggagtcg
acgctggcgcgcattcacttcgtcgtgcatgcgaaaccgggcggcatgcccaatgtcgat
acgcacgagctggaagcgcggctcgtgcaggttgcacgccgctggcaggacgatctcgcc
gatgcgttgctcgatgccttcggcgaagagcagggcaaccgtctgctgcaacactacgca
gattcgttccccgccggctatcgcgacgattatccggcccgcacggcggtgcgcgatatc
gaactgatcgaacgcgtgcaaggcagcgagcggctcgccatgaacctgtaccgcccgatc
gaatcgggcccgcgtgcgtttcgcttcaaggtgtatcgcgcgggtttaccgatcgccctg
tcgcgcagcctgcctatgctcgaacatctcggcgtgcgtgtcgatgaagagcggccctat
ctgatcgaagcgttgggcgcgaccccggcatggattcacgatttcggcctcgaacttgcg
gacgacgcggagttcgatatcgaacgcgtcaaggatctcttcgaagaagcgttcgagcag
gtctggaccggcgcgatcgaaagcgacgacttcaatcgccttgtattgcgcgcgcaactg
gatgcgcgcgaggtgacgatactgcgcgcctatgcgaagtatttgcggcaggtgggctcg
accttcagcgacgcgtatatcgagcgcgcagtgaccggcaatccggcgattgcgcgcatg
ctggtcgagctgttcgtggcccgcttcgacccggtgctgggcgagacgcgcgaggcgcgc
gtcgacggctggctgcgcacaatcgacagtgcgctcgaccaggtgccgaatctcgacgaa
gaccggatactgcggcaatttctcggcgtgatcaaagccacgcaacgcaccaactattat
cgtttcgatgccgaaggtcatcccaagccgtatctgtccttcaagttcaatcccgcgctg
gtgcccggcttgcccgaaccgaaaccgatgttcgaaatctgggtctactcgccgcgcgtg
gaaggcgtgcacttgcgcggcggacgcgtggcgcgcggcggtttgcgctggtcggaccgg
cgcgaggatttccgcacggaggtgctcggcctgatgaaggcccagatggtgaagaacgtg
gtgatcgtgccggtcggttccaaaggcggcttcgtcgtgaagaatccgccgccgcaaacc
gaacgcgacgcgtggatgcatgagggcattgcctgctatcagaccttcctgcgcggcctg
ctcgatctgaccgacaacctcgcgggcacggccgtggtgccgccgcccgacgtagtgcgt
cacgatcccgacgacccctacctggtggtggccgctgacaaaggcacggccacgttctcc
gactacgcgaacgcgatttcgcaagaatacggtttctggctcgacgacgcttttgcgtcg
ggcggttcggtcggttacgaccacaagaaaatggccatcaccgcgcgcggtgcatgggag
tcggtcaagcggcacttccgcgaaatgggcgtggacacgcagaccacggatttcacggtg
gtgggcgtcggcgatatgtcgggcgacgtgtttggcaacggcatgctgctgtcgccgcat
atcaggctggtggccgcgttcgatcatcgacatatctttctcgatccgaatcccgatccg
gcagtcagtcttgccgaacgcgggcgattgttcgtgctcgaccgatcgagttgggccgac
tacgacccttcgctgatctcggcgggcggcggcgtatttccgcgcagcgccaagacgatt
ccgctttcgcaggcggtgcagtcggtgctcggcatcagcgcaccggcgctcgcgcccgcc
gaattgatgcgtgcaattttgcaggcgccggtcgatctgctctacaacggcggcatcggc
acgtatgtgaaggcgagccgcgaaacgcatctgcaggtcggtgatcgcgccaacgacgcg
atccgcgtcaatggcgcggacttgcgttgcaaggtcgtggccgagggcggcaatctcggt
ctcacgcaactcggtcgcatcgagttcgcgcagcgcggcggccgtatcaataccgatgcg
atcgacaattccgcgggcgtcgactgctcggatcacgaggtcaacatcaagattctgctg
gggctggtcgttgccgaaggcgagatgacggagaagcagcgcaatgcgctgctcgccgaa
atgaccgacgaggtcggtttgctcgttttgcaggacaactactaccagactcaggcgctc
tcgatcgccggccggtacggtgtcgaattgctcgatgcggaagcacgcctgatgcgctac
ctcgaacggaccgggcgcctgaatcgcgtgatcgagtttttgccgaccgatgaagagctc
gccgaacggcaggccgcgaaacaggggctcaccacgccggagcgcgcggtgctgctcgcg
tacagcaagatgtggctatatgacgcgctgctcgaatcgtcgatgccggaagacccgctc
gtcgccgacatgctggtcgaatatttcccgaaaccgttgcggcagcgctttagcgagccg
atgcagcgccacccgctgcgccgcgaaattctcgcgacacatctgaccaacgcgctggtg
aatcgggtgggctgcgagttcgtacaccggttgatggaggaaaccgacgcccagcccggc
gatatcgcgcgggcctgcatcatggcccgcgacgtgttcgatctcgaccacgtctggcgc
agtatcgacgcgctcgacaatcgcgttgccgacgacgtccaggcgcgcatgttcgtcgaa
gtcgcgcggctcgtcgagcgttcggcgctgtggttcctgcggcaattgcaatcgggtgcg
gtcagcgacggcgaggtggccggcctgctcgcgcgttgccgggacgcggcgcaacggctg
gcgtcgcaatggccggcgctgctgccgggcgccgacctcgaagcgctctccgagcggcaa
cgcgtgttcgcggacgccggcgtggatagcgaactggcggtgcgggtcgcgagcggcgag
atctcggccgcgctgctcgatatcgccgaagtggcttcgacctgcgggcgcagtctcgaa
ctggtggcgggtgtctatttcgcgctcggtacgctgctcaattccagctggatcagcgag
cgcgccaccgctttgccggtgcccacgcactgggacatgttggcgcgcgccacggcgctg
gccgaactcgcgcgtctgaagcgcgcgttgaccaccagcgcactggccggcgccaacgaa
gcctccacaccggatgcgctcgtcgaggcatggcgtcagaagcgcaccgcgcaactggaa
cgctacgcccggctgctgatcgatctgcgggccacaggcggcgcgagcctgtcgatgctg
ctggtgatcgtgcgggagatggcggcgctcgaaagggcttga
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