Paraburkholderia dioscoreae: PDMSB3_3882
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Entry
PDMSB3_3882 CDS
T08115
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00540
Lipopolysaccharide biosynthesis
pdio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PDMSB3_3882 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pdio01005
]
PDMSB3_3882 (lpxC)
Enzymes [BR:
pdio01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
PDMSB3_3882 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pdio01005
]
Lipid A
PDMSB3_3882 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
VVD30338
UniProt:
A0A5Q4ZPM3
LinkDB
All DBs
Position
I:complement(3980086..3981003)
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AA seq
305 aa
AA seq
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MLKQRTIKQIVKTVGIGLHSGRKVELTLRPAGPDTGIVFSRVDLATPVDIPASAMAIGDT
RLASVLQKDGARVSTIEHLMSACAGLGIDNLYVDVTAEEIPIMDGSAGSFVFLIQSAGIE
EQNAAKKFIKVTKPVEIRDGDKFARLDPYFGFKLKFTIDFRHPAVDKTGQALEVDFANTS
YVREIARARTFGFAHEVEMMRELGLARGGSMDNAIVLDEYRILNNDGLRYDDEFVKHKML
DAIGDLYVVGHPLLASYTAYKSGHGLNNALLRELLAHEDSYEIVTFDDTQKAPRGFAYET
QTAFA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcagcgcactatcaaacaaatcgtcaagacagtcggcattggcctgcactcg
ggccgtaaagtcgaactgacgcttcgtccggccgggccggatacgggcattgtgttttcg
cgcgtggatctggccacgccggtagacattcccgcgtcggcgatggcgattggcgatacg
cgtctggcttctgtcttgcagaaagacggcgcgcgcgtttcgaccatcgagcatctgatg
tccgcctgcgccggtcttggcatcgacaacctgtatgtcgacgtcaccgccgaagaaatt
cccatcatggacggcagtgccggttcgttcgtgtttctgattcaatcggcaggtattgaa
gagcagaacgcggcgaagaaattcatcaaggtcaccaagccggtggaaatccgcgacggc
gataagttcgcgcgtctcgatccgtatttcggtttcaagctcaaattcacgatcgatttc
cgtcacccggctgtggataaaaccggccaggcgctggaagtggattttgccaatacatcg
tacgtgcgcgaaatcgcgcgtgcccgtaccttcggttttgcgcatgaagtggaaatgatg
cgcgaactgggtctcgcacgcggcggcagcatggacaacgcgatcgtgctcgacgagtac
cgcattctgaacaacgacggcctgcgctacgacgacgagttcgtgaagcacaagatgctc
gacgcgatcggcgatctgtatgtggtcggccatccgttgctggcgtcgtacaccgcgtac
aagtcgggtcacggcctgaacaacgcgttgctgcgcgaactgttggcgcacgaagattcg
tacgaaatcgtcaccttcgacgacacgcagaaagcaccgcggggctttgcctacgaaacc
cagacggctttcgcctga
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